Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS22265 | | transcriptional regulator | strong | 100 | 100 |
o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0203 | | Transcriptional regulator | insig. | 41 | 97 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13490 | | LysR family transcriptional regulator | insig. | 43 | 96 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08630 | | LysR family transcriptional regulator | insig. | 40 | 96 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS21255 | | LysR family transcriptional regulator | strong | 36 | 94 |
o | Variovorax sp. SCN45 | GFF3566 | | Transcriptional regulator, LysR family | insig. | 36 | 94 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS19020 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| Ralstonia solanacearum GMI1000 | RS_RS23540 | | LysR family transcriptional regulator | no data | 35 | 96 |
o | Ralstonia solanacearum GMI1000 | RS_RS23670 | | LysR family transcriptional regulator | no data | 35 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23410 | | hypothetical protein | insig. | 33 | 97 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09455 | | LysR family transcriptional regulator | insig. | 34 | 96 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2402 | | Transcriptional regulator, LysR family | insig. | 32 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23395 | | LysR family transcriptional regulator | insig. | 31 | 99 |
o | Dechlorosoma suillum PS | Dsui_3101 | | transcriptional regulator | sig. | 34 | 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5758 | | Transcriptional regulators, LysR family | insig. | 34 | 95 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS12870 | | LysR family transcriptional regulator | insig. | 31 | 97 |
o | Pantoea sp. MT58 | IAI47_09745 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10440 | | LysR family transcriptional regulator | insig. | 33 | 98 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1212.1 | | transcriptional regulator | insig. | 28 | 96 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5059 | | Transcriptional regulator, LysR family | insig. | 33 | 96 |
| Pseudomonas sp. RS175 | PFR28_05019 | | HTH-type transcriptional regulator BenM | insig. | 31 | 97 |
| Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 30 | 97 |
o | Pseudomonas simiae WCS417 | PS417_23675 | | transcriptional regulator | strong | 30 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3735 | | LysR family transcriptional regulator YnfL | insig. | 31 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_3707 | | Transcriptional regulator | insig. | 30 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS22975 | | LysR family transcriptional regulator | sig. | 29 | 98 |
| Pseudomonas simiae WCS417 | PS417_02020 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS02065 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS02065 | | LysR family transcriptional regulator | sig. | 31 | 99 |
| Pseudomonas fluorescens SBW25 | PFLU_RS25485 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS25485 | | LysR family transcriptional regulator | sig. | 30 | 97 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 31 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS10740 | | LysR family transcriptional regulator | insig. | 32 | 97 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2713 | | transcriptional regulator, LysR family | insig. | 32 | 97 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2713 | | transcriptional regulator, LysR family | insig. | 32 | 97 |
| Azospirillum brasilense Sp245 | AZOBR_RS19665 | | LysR family transcripitonal regulator | insig. | 32 | 97 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1988 | | transcriptional regulator, LysR family | insig. | 33 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18300 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_09290 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| Dickeya dadantii 3937 | DDA3937_RS10670 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1530 | | LysR family transcriptional regulator YnfL | insig. | 31 | 97 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS05680 | | LysR family transcriptional regulator | cofit | 29 | 96 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_255 | | LysR family transcriptional regulator YnfL | insig. | 31 | 97 |
| Escherichia coli BL21 | ECD_01564 | | LysR family putative transcriptional regulator | no data | 31 | 95 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02131 | | Hca operon transcriptional activator HcaR | insig. | 31 | 95 |
| Escherichia coli BW25113 | b1595 | ynfL | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 31 | 95 |
o | Pseudomonas putida KT2440 | PP_3716 | | HTH-type transcriptional regulator | strong | 30 | 99 |
| Escherichia coli ECOR27 | NOLOHH_18240 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Escherichia coli ECOR38 | HEPCGN_06110 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 31 | 95 |
| Escherichia coli ECRC101 | OKFHMN_27735 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Escherichia coli ECRC101 | MCAODC_17675 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Escherichia coli ECRC102 | NIAGMN_00340 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Escherichia coli ECRC62 | BNILDI_17030 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 31 | 95 |
| Escherichia coli ECRC98 | JDDGAC_02325 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Escherichia coli ECRC99 | KEDOAH_00370 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 31 | 95 |
| Pseudomonas fluorescens SBW25 | PFLU_RS11235 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS11235 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07095 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 33 | 97 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32390 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04590 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1786 | | LysR family transcriptional regulator YnfL | insig. | 30 | 97 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS17450 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS10670 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| Dickeya dianthicola ME23 | DZA65_RS11140 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3313 | | transcriptional regulator, LysR family (TIGR) | insig. | 30 | 95 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17920 | | LysR family transcriptional regulator | no data | 29 | 96 |
o | Ralstonia solanacearum UW163 | UW163_RS21220 | | LysR family transcriptional regulator | no data | 29 | 96 |
o | Agrobacterium fabrum C58 | Atu4021 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| Ralstonia solanacearum GMI1000 | RS_RS23100 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1494 | | Transcriptional regulator | insig. | 31 | 92 |
| Escherichia fergusonii Becca | EFB2_02397 | | Hca operon transcriptional activator HcaR | insig. | 30 | 95 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08910 | | LysR family transcriptional regulator | no data | 30 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25005 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| Pseudomonas putida KT2440 | PP_5071 | | putative DNA-binding transcriptional regulator | insig. | 31 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS02635 | | LysR family transcriptional regulator | insig. | 29 | 95 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_23510 | | transcriptional regulator | insig. | 29 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS35360 | | LysR family transcriptional regulator | no data | 32 | 95 |
| Enterobacter sp. TBS_079 | MPMX20_02062 | | Hca operon transcriptional activator HcaR | sig. | 30 | 92 |
| Pseudomonas sp. RS175 | PFR28_01797 | | Hca operon transcriptional activator HcaR | insig. | 32 | 94 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04511 | | DNA-binding transcriptional regulator, LysR family | insig. | 30 | 97 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3825 | | Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) | sig. | 29 | 97 |
| Pseudomonas putida KT2440 | PP_3179 | | Transcriptional regulator, LysR family | sig. | 32 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS17965 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_690 | | Transcriptional regulator, LysR family | sig. | 31 | 96 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_12600 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS21830 | | transcriptional regulator | insig. | 29 | 96 |
| Pseudomonas stutzeri RCH2 | Psest_0368 | | Transcriptional regulator | insig. | 32 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03905 | | hypothetical protein | insig. | 30 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS12500 | | LysR family transcriptional regulator | insig. | 30 | 97 |
o | Paraburkholderia graminis OAS925 | ABIE53_002238 | | DNA-binding transcriptional LysR family regulator | sig. | 30 | 95 |
| Variovorax sp. SCN45 | GFF5688 | | Transcriptional regulator, LysR family | insig. | 28 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01089 | | transcriptional regulator, LysR family | no data | 30 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23510 | | LysR family transcriptional regulator | insig. | 32 | 87 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5066 | | Transcriptional regulator, LysR family | no data | 28 | 96 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS22730 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03683 | | transcriptional regulator, LysR family | insig. | 30 | 97 |
| Rahnella sp. WP5 | EX31_RS16990 | | LysR family transcriptional regulator | insig. | 32 | 92 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25375 | | LysR family transcriptional regulator | no data | 28 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS36440 | | LysR family transcriptional regulator | insig. | 34 | 88 |