Homologs of CA265_RS01040 from Pedobacter sp. GW460-11-11-14-LB5

sigma-54-dependent Fis family transcriptional regulator
SEED: Response regulator of zinc sigma-54-dependent two-component system

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator insig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12650 sigma-54 dependent transcriptional regulator insig. 64 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14380 sigma-54 dependent transcriptional regulator insig. 57 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09510 sigma-54-dependent Fis family transcriptional regulator sig. 55 99
o Bacteroides ovatus ATCC 8483 BACOVA_01571 Sigma-54 interaction domain protein insig. 56 98
o Bacteroides thetaiotaomicron VPI-5482 BT2433 two-component system response regulator (NCBI ptt file) sig. 56 98
o Bacteroides stercoris CC31F HMPREF1181_RS03655 sigma-54-dependent Fis family transcriptional regulator cofit 54 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04160 sigma-54-dependent Fis family transcriptional regulator insig. 56 98
o Phocaeicola dorei CL03T12C01 ABI39_RS17060 sigma-54-dependent Fis family transcriptional regulator insig. 56 98
o Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein cofit 40 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 40 98
o Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 40 98
o Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 40 98
o Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 40 98
o Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC cofit 40 98
o Desulfovibrio vulgaris Miyazaki F DvMF_0700 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 38 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU1419 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) sig. 40 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 38 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 37 98
o Azospirillum brasilense Sp245 AZOBR_RS18445 chemotaxis protein CheY insig. 38 98
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 38 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3305 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) strong 39 99
  Escherichia coli ECOR27 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 38 97
  Escherichia coli BL21 ECD_03881 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein insig. 38 97
  Klebsiella michiganensis M5al BWI76_RS01605 transcriptional regulatory protein ZraR insig. 38 97
  Escherichia fergusonii Becca EFB2_04606 Transcriptional regulatory protein ZraR insig. 38 97
  Escherichia coli ECOR38 HEPCGN_11960 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 38 97
  Escherichia coli ECRC101 MCAODC_03820 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 38 97
  Escherichia coli ECRC102 NIAGMN_11070 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 38 97
  Escherichia coli ECRC99 KEDOAH_14840 zraR sigma-54-dependent response regulator transcription factor ZraR no data 38 97
  Escherichia coli Nissle 1917 ECOLIN_RS23090 sigma-54-dependent response regulator transcription factor ZraR insig. 38 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 36 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2109 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 35 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04045 Transcriptional regulatory protein ZraR insig. 38 97
  Escherichia coli ECRC62 BNILDI_06055 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 38 97
o Azospirillum sp. SherDot2 MPMX19_03494 Regulatory protein AtoC insig. 38 98
  Escherichia coli BW25113 b4004 zraR fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) insig. 38 97
  Escherichia coli ECRC101 OKFHMN_13320 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 38 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0110 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) cofit 36 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4188 Response regulator of zinc sigma-54-dependent two-component system insig. 38 97
  Escherichia coli ECRC98 JDDGAC_16945 zraR sigma-54-dependent response regulator transcription factor ZraR no data 38 97
  Desulfovibrio vulgaris Miyazaki F DvMF_1993 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) sig. 36 99
o Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 36 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 36 100
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 35 99
o Serratia liquefaciens MT49 IAI46_24960 nitrogen regulation protein NR(I) strong 36 98
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 35 100
o Burkholderia phytofirmans PsJN BPHYT_RS05575 Fis family transcriptional regulator strong 40 98
o Pseudomonas putida KT2440 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein strong 38 98
  Pseudomonas simiae WCS417 PS417_05535 Fis family transcriptional regulator strong 38 98
o Pseudomonas fluorescens FW300-N2C3 AO356_18205 Fis family transcriptional regulator insig. 38 98
o Ralstonia solanacearum PSI07 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator strong 38 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_776 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake insig. 37 98
o Paraburkholderia graminis OAS925 ABIE53_001365 DNA-binding NtrC family response regulator strong 39 98
  Escherichia coli BL21 ECD_03753 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein insig. 36 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04184 DNA-binding transcriptional regulator NtrC insig. 36 98
o Dickeya dadantii 3937 DDA3937_RS00125 nitrogen regulation protein NR(I) cofit 36 98
  Escherichia coli ECRC62 BNILDI_05290 glnG nitrogen regulation protein NR(I) insig. 36 98
  Escherichia fergusonii Becca EFB2_04748 DNA-binding transcriptional regulator NtrC strong 35 98
  Escherichia coli ECOR27 NOLOHH_06240 glnG nitrogen regulation protein NR(I) cofit 35 98
  Escherichia coli ECRC101 OKFHMN_14110 glnG nitrogen regulation protein NR(I) insig. 35 98
  Escherichia coli ECRC101 MCAODC_04610 glnG nitrogen regulation protein NR(I) insig. 35 98
  Escherichia coli ECRC102 NIAGMN_11865 glnG nitrogen regulation protein NR(I) insig. 35 98
  Escherichia coli ECRC98 JDDGAC_17735 glnG nitrogen regulation protein NR(I) no data 35 98
  Escherichia coli ECRC99 KEDOAH_14040 glnG nitrogen regulation protein NR(I) no data 35 98
  Escherichia coli BW25113 b3868 glnG fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) strong 35 98
o Dickeya dianthicola 67-19 HGI48_RS21235 nitrogen regulation protein NR(I) strong 36 98
o Dickeya dianthicola ME23 DZA65_RS22210 nitrogen regulation protein NR(I) strong 36 98
o Ralstonia solanacearum GMI1000 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator cofit 38 98
  Escherichia coli ECOR38 HEPCGN_12740 glnG nitrogen regulation protein NR(I) cofit 35 98
  Desulfovibrio vulgaris Miyazaki F DvMF_0215 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 40 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00240 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family strong 39 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5565 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake insig. 38 98
o Erwinia tracheiphila SCR3 LU632_RS22135 glnG nitrogen regulation protein NR(I) strong 36 98
o Pantoea sp. MT58 IAI47_00450 nitrogen regulation protein NR(I) strong 36 98
o Rahnella sp. WP5 EX31_RS15880 nitrogen regulation protein NR(I) strong 36 98
  Escherichia coli Nissle 1917 ECOLIN_RS22295 nitrogen regulation protein NR(I) sig. 35 98
o Pectobacterium carotovorum WPP14 HER17_RS21440 nitrogen regulation protein NR(I) cofit 35 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3635 Nitrogen regulation protein NR(I) insig. 36 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2220 Nitrogen regulation protein NR(I) strong 35 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS24790 sigma-54 dependent transcriptional regulator cofit 39 98
  Pseudomonas fluorescens SBW25 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator insig. 37 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator strong 37 98
o Enterobacter asburiae PDN3 EX28DRAFT_4350 nitrogen regulation protein NR(I) insig. 36 98
o Enterobacter sp. TBS_079 MPMX20_04597 DNA-binding transcriptional regulator NtrC strong 35 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS43250 sigma-54 dependent transcriptional regulator insig. 38 98
o Pseudomonas sp. RS175 PFR28_03376 C4-dicarboxylate transport transcriptional regulatory protein DctD sig. 37 98
  Pseudomonas fluorescens FW300-N2E3 AO353_16265 Fis family transcriptional regulator strong 37 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4775 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake strong 37 98
  Klebsiella michiganensis M5al BWI76_RS00385 nitrogen assimilation regulatory protein strong 36 98
  Azospirillum sp. SherDot2 MPMX19_02733 Regulatory protein LuxO insig. 36 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2455 Putative sensory histidine kinase YfhA strong 38 98
o Dechlorosoma suillum PS Dsui_3286 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 38 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator strong 37 98
o Ralstonia solanacearum UW163 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator strong 37 98
  Desulfovibrio vulgaris Miyazaki F DvMF_1461 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 40 87
o Ralstonia sp. UNC404CL21Col ABZR87_RS23515 sigma-54 dependent transcriptional regulator strong 38 98
o Pseudomonas stutzeri RCH2 Psest_3911 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 36 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16520 DNA-binding response regulator insig. 36 98
  Dickeya dadantii 3937 DDA3937_RS15640 two-component system response regulator GlrR cofit 39 98