Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Burkholderia phytofirmans PsJN | BPHYT_RS11310 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05209 | | transcriptional regulator, LysR family | strong | 87 | 99 |
o | Paraburkholderia graminis OAS925 | ABIE53_002341 | | DNA-binding transcriptional LysR family regulator | insig. | 85 | 99 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS07245 | | LysR family transcriptional regulator | insig. | 79 | 99 |
o | Pseudomonas putida KT2440 | PP_3660 | | Transcriptional regulator, LysR family | insig. | 72 | 99 |
o | Pseudomonas sp. BP01 | JOY50_RS07920 | | LysR family transcriptional regulator | insig. | 71 | 99 |
| Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 40 | 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2192 | | Cys regulon transcriptional activator CysB | insig. | 33 | 98 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1980 | rbcR | transcriptional regulator, LysR family | no data | 34 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26205 | | LysR family transcriptional regulator | insig. | 37 | 92 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS16560 | | HTH-type transcriptional activator CmpR | sig. | 30 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07470 | | LysR family transcriptional regulator | no data | 38 | 90 |
o | Methylophilus sp. DMC18 | GFF1962 | | HTH-type transcriptional activator CmpR | insig. | 33 | 99 |
| Shewanella loihica PV-4 | Shew_1245 | | LysR family transcriptional regulator (RefSeq) | strong | 31 | 97 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS04820 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16845 | | LysR family transcriptional regulator | sig. | 33 | 99 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2984 | | LysR family transcriptional regulator PA3398 | strong | 33 | 99 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_05630 | | LysR family transcriptional regulator | sig. | 33 | 99 |
| Pseudomonas sp. BP01 | JOY50_RS23820 | finR | LysR family transcriptional regulator FinR | cofit | 32 | 98 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3152 | | LysR family transcriptional regulator PA3398 | sig. | 32 | 99 |
| Pseudomonas sp. RS175 | PFR28_00480 | | HTH-type transcriptional activator CmpR | sig. | 33 | 99 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 33 | 99 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1386 | | transcriptional regulator, LysR family | insig. | 33 | 99 |
| Pseudomonas putida KT2440 | PP_1637 | | Transcriptional regulator, LysR family | sig. | 32 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS23600 | | LysR family transcriptional regulator | insig. | 38 | 83 |
| Pseudomonas sp. DMC3 | GFF2119 | | HTH-type transcriptional activator CmpR | insig. | 32 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03013 | | transcriptional regulator, LysR family | insig. | 33 | 93 |
| Pseudomonas sp. S08-1 | OH686_18820 | | Transcriptional regulator, LysR family | insig. | 32 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_2863 | | Transcriptional regulator | strong | 35 | 94 |
| Dechlorosoma suillum PS | Dsui_2229 | | transcriptional regulator | cofit | 35 | 98 |
| Dechlorosoma suillum PS | Dsui_2257 | | transcriptional regulator | cofit | 34 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | sig. | 33 | 93 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29890 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 30 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34015 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS20425 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Pseudomonas sp. SVBP6 | COO64_RS19970 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| Pectobacterium carotovorum WPP14 | HER17_RS12840 | | LysR family transcriptional regulator | cofit | 32 | 98 |
| Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 31 | 97 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12590 | | LysR family transcriptional regulator | sig. | 29 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS31340 | | transcriptional regulator | insig. | 34 | 93 |
| Sinorhizobium meliloti 1021 | SM_b21535 | | LysR family transcriptional regulator | insig. | 37 | 85 |
| Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 33 | 99 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1204 | | Transcriptional regulator | strong | 29 | 94 |
| Rhodopseudomonas palustris CGA009 | TX73_007990 | | LysR family transcriptional regulator | no data | 33 | 96 |
| Rahnella sp. WP5 | EX31_RS19050 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| Pseudomonas aeruginosa PA14 | IKLFDK_17440 | | LysR family transcriptional regulator | insig. | 32 | 99 |
| Acinetobacter baumannii LAC-4 | RR41_RS15435 | | LysR family transcriptional regulator GigC | insig. | 31 | 100 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3961 | | transcriptional regulator, MerR family | insig. | 37 | 97 |
| Pseudomonas sp. DMC3 | GFF1457 | | HTH-type transcriptional activator CmpR | insig. | 36 | 97 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05920 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05920 | | LysR family transcriptional regulator | sig. | 31 | 99 |
| Dickeya dadantii 3937 | DDA3937_RS09260 | | LysR family transcriptional regulator | insig. | 31 | 100 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_01341 | | HTH-type transcriptional activator CmpR | cofit | 31 | 99 |
| Pseudomonas simiae WCS417 | PS417_05850 | | LysR family transcriptional regulator | strong | 31 | 99 |
| Dickeya dianthicola 67-19 | HGI48_RS09285 | | LysR family transcriptional regulator | insig. | 31 | 100 |
| Escherichia coli BL21 | ECD_00292 | | transcriptional activator of cyn operon; autorepressor | insig. | 33 | 90 |
| Escherichia coli BW25113 | b0338 | cynR | DNA-binding transcriptional dual regulator (NCBI) | insig. | 33 | 90 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | insig. | 32 | 93 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS08845 | | LysR family transcriptional regulator | strong | 29 | 99 |
| Escherichia coli ECRC62 | BNILDI_23155 | cynR | transcriptional regulator CynR | insig. | 33 | 90 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03333 | | HTH-type transcriptional regulator CynR | insig. | 33 | 90 |
| Escherichia coli ECOR27 | NOLOHH_01740 | cynR | transcriptional regulator CynR | insig. | 32 | 93 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_12015 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Pseudomonas sp. RS175 | PFR28_04519 | | HTH-type transcriptional activator CmpR | strong | 30 | 98 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2009 | | LysR family transcriptional regulator PA5437 | strong | 30 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | strong | 30 | 98 |
| Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | insig. | 32 | 83 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.309.1 | | Chromosome initiation inhibitor | insig. | 34 | 97 |
| Escherichia coli ECOR38 | HEPCGN_07455 | cynR | transcriptional regulator CynR | insig. | 32 | 93 |
| Pseudomonas simiae WCS417 | PS417_28220 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 30 | 100 |
| Acinetobacter radioresistens SK82 | MPMX26_02541 | | HTH-type transcriptional regulator CysL | strong | 30 | 98 |
| Pseudomonas putida KT2440 | PP_2547 | | Transcriptional regulator, LysR family | insig. | 37 | 78 |
| Rhodanobacter denitrificans MT42 | LRK55_RS12535 | | LysR family transcriptional regulator | cofit | 35 | 85 |
| Escherichia coli ECRC100 | OKFHMN_08840 | cynR | transcriptional regulator CynR | insig. | 32 | 90 |
| Escherichia coli ECRC101 | MCAODC_28070 | cynR | transcriptional regulator CynR | insig. | 32 | 90 |
| Escherichia coli ECRC102 | NIAGMN_06895 | cynR | transcriptional regulator CynR | insig. | 32 | 90 |
| Escherichia coli ECRC98 | JDDGAC_12495 | cynR | transcriptional regulator CynR | insig. | 32 | 90 |
| Escherichia coli ECRC99 | KEDOAH_19125 | cynR | transcriptional regulator CynR | no data | 32 | 90 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_727 | | LysR family transcriptional regulator PA5437 | strong | 29 | 98 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12835 | | LysR family transcriptional regulator | insig. | 35 | 85 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_0162 | | Transcriptional regulator | insig. | 31 | 91 |
| Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| Pseudomonas fluorescens SBW25 | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Pseudomonas sp. BP01 | JOY50_RS10245 | | LysR substrate-binding domain-containing protein | insig. | 37 | 78 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_01824 | | HTH-type transcriptional regulator CysB | cofit | 31 | 89 |
| Pseudomonas sp. BP01 | JOY50_RS08760 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_00112 | | HTH-type transcriptional activator CmpR | strong | 30 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_05150 | | HTH-type transcriptional activator CmpR | insig. | 35 | 88 |
| Pseudomonas sp. SVBP6 | COO64_RS01820 | | LysR family transcriptional regulator | strong | 30 | 98 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04990 | | LysR family transcriptional regulator | insig. | 28 | 86 |
| Pseudomonas simiae WCS417 | PS417_17140 | | LysR family transcriptional regulator | insig. | 34 | 86 |
| Pseudomonas fluorescens SBW25 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | strong | 31 | 89 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | strong | 31 | 89 |
| Pseudomonas simiae WCS417 | PS417_08460 | | CysB family transcriptional regulator | no data | 31 | 89 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10035 | | LysR family transcriptional regulator | strong | 29 | 98 |
| Bacteroides ovatus ATCC 8483 | BACOVA_05396 | | LysR substrate binding domain protein | strong | 28 | 86 |