Homologs of Shewana3_4164 from Shewanella sp. ANA-3

HsdR family type I site-specific deoxyribonuclease (RefSeq)
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

96 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_4164 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 100 100
o Herbaspirillum seropedicae SmR1 HSERO_RS22780 DEAD/DEAH box helicase insig. 66 98
  Bacteroides ovatus ATCC 8483 BACOVA_05330 type I site-specific deoxyribonuclease, HsdR family cofit 33 60
  Alteromonas macleodii MIT1002 MIT1002_03210 Type-1 restriction enzyme R protein insig. 29 76
  Alteromonas macleodii MIT1002 MIT1002_00593 Type I restriction enzyme EcoR124II R protein cofit 31 76
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4436 type I site-specific deoxyribonuclease, HsdR family insig. 31 76
  Fusobacterium nucleatum SB010 HUW76_08985 type I restriction endonuclease subunit R strong 28 71
  Cellulophaga baltica 18 M666_RS02045 type I restriction endonuclease subunit R cofit 32 58
  Escherichia coli ECRC62 BNILDI_07600 hsdR Type I restriction enzyme EcoR124II endonuclease subunit insig. 31 76
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15095 type I restriction endonuclease subunit R no data 31 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2633 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) no data 31 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02835 type I restriction endonuclease subunit R insig. 32 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.611.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 33 58
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03160 type I restriction endonuclease subunit R cofit 41 36
  Bacteroides thetaiotaomicron VPI-5482 BT4535 Type I restriction enzyme EcoR124II R protein (NCBI ptt file) cofit 37 45
  Paraburkholderia graminis OAS925 ABIE53_000533 type I restriction enzyme R subunit insig. 27 58
  Escherichia coli ECRC100 OKFHMN_05715 restriction endonuclease subunit R cofit 26 60
  Dickeya dianthicola ME23 DZA65_RS04740 HsdR family type I site-specific deoxyribonuclease insig. 26 59
  Castellaniella sp019104865 MT123 ABCV34_RS09190 type I restriction endonuclease subunit R insig. 26 57
  Rhodanobacter sp. FW510-T8 OKGIIK_06705 Type I restriction enzyme endonuclease subunit insig. 26 59
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05380 HsdR family type I site-specific deoxyribonuclease insig. 24 58
  Azospirillum sp. SherDot2 MPMX19_00137 hypothetical protein cofit 25 62
  Cupriavidus basilensis FW507-4G11 RR42_RS18675 restriction endonuclease subunit R insig. 25 65
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08925 type I restriction endonuclease subunit R insig. 23 73
  Phaeobacter inhibens DSM 17395 PGA1_c30690 putative type I restriction-modification system, R subunit insig. 26 62
  Methanococcus maripaludis JJ MMJJ_RS02745 type I restriction endonuclease subunit R no data 24 74
  Desulfovibrio vulgaris Hildenborough JW710 DVU1703 type I restriction-modification enzyme, R subunit (TIGR) insig. 24 61
  Rhodanobacter sp. FW510-T8 OKGIIK_15915 Type I restriction enzyme endonuclease subunit insig. 24 64
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03160 type I restriction endonuclease subunit R cofit 34 18
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08640 HsdR family type I site-specific deoxyribonuclease insig. 26 40
  Bacteroides thetaiotaomicron VPI-5482 BT4535 Type I restriction enzyme EcoR124II R protein (NCBI ptt file) cofit 33 18
  Shewanella oneidensis MR-1 SO0380 hsdR-1 type I restriction-modification system, R subunit (NCBI ptt file) insig. 22 58
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06660 type I restriction-modification system endonuclease insig. 23 58
  Alteromonas macleodii MIT1002 MIT1002_04087 Type-1 restriction enzyme R protein insig. 23 32
  Escherichia fergusonii Becca EFB2_04103 hypothetical protein insig. 24 76
  Escherichia coli Nissle 1917 ECOLIN_RS24950 HsdR family type I site-specific deoxyribonuclease insig. 24 76
  Pseudomonas segetis P6 ACVTMO_RS09885 type I restriction endonuclease subunit R insig. 23 45
  Castellaniella sp019104865 MT123 ABCV34_RS11910 type I restriction endonuclease subunit R insig. 26 32
  Bacteroides ovatus ATCC 8483 BACOVA_04167 type I site-specific deoxyribonuclease, HsdR family insig. 24 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02139 type I restriction enzyme, R subunit insig. 23 32
  Shewanella sp. ANA-3 Shewana3_4244 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 22 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10495 type I restriction endonuclease subunit R cofit 24 69
  Escherichia coli ECOR38 HEPCGN_10720 type I restriction endonuclease insig. 23 70
  Sinorhizobium meliloti 1021 SMc02292 type I restriction enzyme R protein insig. 24 56
  Synechocystis sp000284455 PCC 6803 SGL_RS01835 type I restriction endonuclease subunit R cofit 26 32
  Shewanella sp. ANA-3 Shewana3_3790 HsdR family type I site-specific deoxyribonuclease (RefSeq) cofit 24 31
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1523.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) strong 27 32
  Rhodanobacter denitrificans MT42 LRK55_RS10135 type I restriction endonuclease subunit R cofit 24 58
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14280 DEAD/DEAH box helicase no data 23 32
  Klebsiella michiganensis M5al BWI76_RS03670 type I restriction-modification system subunit R insig. 22 70
  Xanthobacter sp. DMC5 GFF2200 hypothetical protein insig. 26 32
  Pseudomonas sp. DMC3 GFF4952 hypothetical protein insig. 27 35
  Dickeya dianthicola ME23 DZA65_RS03370 type I restriction endonuclease subunit R insig. 24 34
  Pseudomonas orientalis W4I3 QF045_RS26425 type I restriction endonuclease insig. 24 34
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04590 type I restriction endonuclease subunit R cofit 24 34
  Rhodanobacter sp. FW510-T8 OKGIIK_13425 DEAD/DEAH box helicase insig. 26 32
  Pseudomonas stutzeri RCH2 Psest_4044 type I site-specific deoxyribonuclease, HsdR family strong 24 34
  Bacteroides thetaiotaomicron VPI-5482 BT4517 Type I restriction enzyme EcoKI R protein (NCBI ptt file) insig. 25 33
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07505 DEAD/DEAH box helicase family protein insig. 24 33
  Bacteroides stercoris CC31F HMPREF1181_RS13645 DEAD/DEAH box helicase family protein insig. 26 33
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3936.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 27 27
  Rhodanobacter denitrificans MT42 LRK55_RS00325 type I restriction endonuclease strong 26 27
  Phocaeicola dorei CL03T12C01 ABI39_RS21435 DEAD/DEAH box helicase family protein insig. 24 33
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14280 DEAD/DEAH box helicase no data 37 11
  Pseudomonas segetis P6 ACVTMO_RS09885 type I restriction endonuclease subunit R insig. 44 7
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02139 type I restriction enzyme, R subunit insig. 38 11
  Rhodanobacter sp. FW510-T8 OKGIIK_13425 DEAD/DEAH box helicase insig. 47 7
  Alteromonas macleodii MIT1002 MIT1002_04087 Type-1 restriction enzyme R protein insig. 50 6
  Kangiella aquimarina DSM 16071 B158DRAFT_1641 type I site-specific deoxyribonuclease, HsdR family insig. 24 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1523.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) strong 47 7
  Xanthobacter sp. DMC5 GFF2200 hypothetical protein insig. 39 9
  Vibrio cholerae E7946 ATCC 55056 CSW01_08855 type I restriction endonuclease subunit R insig. 22 56
  Bacteroides ovatus ATCC 8483 BACOVA_04167 type I site-specific deoxyribonuclease, HsdR family insig. 43 5
  Rhodanobacter sp. FW510-T8 OKGIIK_08955 Type I restriction enzyme endonuclease subunit insig. 28 17
  Pseudomonas stutzeri RCH2 Psest_4044 type I site-specific deoxyribonuclease, HsdR family strong 40 8
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 24 22
  Castellaniella sp019104865 MT123 ABCV34_RS11910 type I restriction endonuclease subunit R insig. 36 9
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08640 HsdR family type I site-specific deoxyribonuclease insig. 30 12
  Dickeya dianthicola ME23 DZA65_RS03370 type I restriction endonuclease subunit R insig. 45 5
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04590 type I restriction endonuclease subunit R cofit 49 4
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 26 22
  Pseudomonas orientalis W4I3 QF045_RS26425 type I restriction endonuclease insig. 49 4
  Kangiella aquimarina DSM 16071 B158DRAFT_1641 type I site-specific deoxyribonuclease, HsdR family insig. 38 6
  Shewanella sp. ANA-3 Shewana3_3790 HsdR family type I site-specific deoxyribonuclease (RefSeq) cofit 33 7
  Marinobacter adhaerens HP15 HP15_1582 type III restriction enzyme, res subunit insig. 22 34
  Rhodanobacter sp. FW510-T8 OKGIIK_08955 Type I restriction enzyme endonuclease subunit insig. 36 7
  Shewanella sp. ANA-3 Shewana3_2026 type III restriction enzyme, res subunit (RefSeq) insig. 24 20
  Escherichia coli BL21 ECD_04216 endonuclease R Type I restriction enzyme insig. 21 32
  Escherichia coli BW25113 b4350 hsdR endonuclease R (RefSeq) insig. 21 32
  Castellaniella sp019104865 MT123 ABCV34_RS05460 DEAD/DEAH box helicase family protein insig. 25 21
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01075 DEAD/DEAH box helicase family protein insig. 25 22
  Phocaeicola dorei CL03T12C01 ABI39_RS01800 type I restriction endonuclease subunit R insig. 21 57
  Rhodanobacter sp. FW510-T8 OKGIIK_13985 Restriction endonuclease insig. 25 22
  Paraburkholderia graminis OAS925 ABIE53_005410 type I restriction enzyme R subunit insig. 20 23
  Pseudomonas stutzeri RCH2 Psest_3407 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 31 7
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0422 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 28 13