Homologs of Sama_0809 from Shewanella amazonensis SB2B

putative diguanylate phosphodiesterase (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_0809 putative diguanylate phosphodiesterase (RefSeq) insig. 100 100
o Shewanella loihica PV-4 Shew_0951 response regulator receiver modulated diguanylate phosphodiesterase (RefSeq) insig. 57 96
  Shewanella amazonensis SB2B Sama_2580 putative diguanylate phosphodiesterase (RefSeq) insig. 33 94
o Herbaspirillum seropedicae SmR1 HSERO_RS03135 diguanylate cyclase sig. 33 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1770.1 hypothetical protein insig. 32 94
o Magnetospirillum magneticum AMB-1 AMB_RS10945 diguanylate phosphodiesterase insig. 31 91
  Rhodospirillum rubrum S1H Rru_A3494 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI) insig. 29 96
o Methylophilus sp. DMC18 GFF1835 Regulator of RpoS cofit 29 94
o Pseudomonas sp. SVBP6 COO64_RS26085 EAL domain-containing protein insig. 30 91
o Pseudomonas simiae WCS417 PS417_16935 diguanylate phosphodiesterase insig. 30 91
  Alteromonas macleodii MIT1002 MIT1002_04215 Bacteriophytochrome cph2 insig. 28 95
  Pseudomonas sp. SVBP6 COO64_RS04950 EAL domain-containing protein insig. 30 95
o Pseudomonas fluorescens SBW25 PFLU_RS07895 EAL domain-containing protein insig. 30 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07895 EAL domain-containing protein sig. 30 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_08305 diguanylate phosphodiesterase insig. 27 98
o Pseudomonas aeruginosa PA14 IKLFDK_00990 diguanylate phosphodiesterase insig. 31 94
  Pseudomonas sp. SVBP6 COO64_RS26040 EAL domain-containing protein insig. 31 86
  Pseudomonas fluorescens FW300-N2E3 AO353_18200 diguanylate phosphodiesterase insig. 29 96
  Pseudomonas sp. RS175 PFR28_01497 Sensor histidine kinase RcsC insig. 29 96
  Pseudomonas aeruginosa MRSN321 DY961_RS13125 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 30 92
  Pseudomonas aeruginosa PA14 IKLFDK_20360 two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 30 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS48445 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 30 92
  Pseudomonas fluorescens SBW25 PFLU_RS15265 EAL domain-containing response regulator insig. 29 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15265 EAL domain-containing response regulator insig. 29 92
o Cupriavidus basilensis FW507-4G11 RR42_RS09710 hypothetical protein insig. 26 94
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 64
  Magnetospirillum magneticum AMB-1 AMB_RS16740 diguanylate phosphodiesterase insig. 29 93
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 33 60
  Xanthobacter sp. DMC5 GFF4583 hypothetical protein insig. 33 60
  Caulobacter crescentus NA1000 CCNA_00692 PAS-family GGDEF/EAL protein insig. 33 61
  Caulobacter crescentus NA1000 Δfur CCNA_00692 PAS-family GGDEF/EAL protein cofit 33 61
  Escherichia coli ECOR27 NOLOHH_18950 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase insig. 31 60
  Escherichia coli ECRC62 BNILDI_17435 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase insig. 31 60
  Rhodopseudomonas palustris CGA009 TX73_008635 EAL domain-containing response regulator insig. 29 85
  Enterobacter asburiae PDN3 EX28DRAFT_1011 FOG: EAL domain insig. 34 64
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 34 60
  Marinobacter adhaerens HP15 HP15_3631 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 31 62
  Escherichia coli BW25113 b1489 b1489 putative enzyme (VIMSS) sig. 31 60
  Pseudomonas sp. SVBP6 COO64_RS26530 bifunctional diguanylate cyclase/phosphodiesterase no data 32 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02228 Oxygen sensor protein DosP insig. 31 60
  Azospirillum sp. SherDot2 MPMX19_02219 hypothetical protein insig. 33 61
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 32 60
  Escherichia coli ECRC100 OKFHMN_01310 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase cofit 31 60
  Escherichia coli ECRC101 MCAODC_16630 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase sig. 31 60
  Escherichia coli ECRC102 NIAGMN_25440 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase no data 31 60
  Escherichia coli ECRC98 JDDGAC_03800 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase insig. 31 60
  Escherichia coli ECRC99 KEDOAH_27135 dosP oxygen-sensing cyclic-di-GMP phosphodiesterase no data 31 60
  Escherichia fergusonii Becca EFB2_02508 Oxygen sensor protein DosP insig. 31 60
  Acinetobacter baumannii LAC-4 RR41_RS05715 EAL domain-containing protein insig. 30 64
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08140 EAL domain-containing protein cofit 33 62
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 32 63
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 32 60
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 59
  Pseudomonas sp. RS175 PFR28_02059 Oxygen sensor protein DosP insig. 34 61
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 32 57
  Pseudomonas syringae pv. syringae B728a Psyr_1293 EAL:Response regulator receiver insig. 27 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1293 EAL:Response regulator receiver insig. 27 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 59
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 30 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 31 64
  Escherichia coli BL21 ECD_01447 oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator no data 31 60
  Acidovorax sp. GW101-3H11 Ac3H11_2319 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 31 74
  Herbaspirillum seropedicae SmR1 HSERO_RS04200 diguanylate cyclase insig. 31 65
  Magnetospirillum magneticum AMB-1 AMB_RS21860 GGDEF domain-containing protein cofit 33 59
  Pseudomonas sp. DMC3 GFF2190 putative signaling protein insig. 33 59
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 32 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU0408 response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 31 66
  Pseudomonas segetis P6 ACVTMO_RS18635 putative bifunctional diguanylate cyclase/phosphodiesterase strong 31 63
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 62
  Shewanella sp. ANA-3 Shewana3_0868 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 33 62
  Serratia liquefaciens MT49 IAI46_24280 cyclic di-GMP phosphodiesterase cofit 31 64
  Pseudomonas putida KT2440 PP_3182 GGDEF domain protein insig. 33 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS35680 sensor domain-containing phosphodiesterase insig. 33 57
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 61
  Cupriavidus basilensis FW507-4G11 RR42_RS37310 diguanylate cyclase insig. 32 59
  Sphingobium sp. HT1-2 GFF3167 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 31 61
  Marinobacter adhaerens HP15 HP15_3767 sensory box/GGDEF family protein insig. 30 68
  Pseudomonas aeruginosa MRSN321 DY961_RS04780 sensor domain-containing phosphodiesterase insig. 33 57
  Pseudomonas aeruginosa PA14 IKLFDK_12640 sensor domain-containing phosphodiesterase insig. 33 57
  Paraburkholderia graminis OAS925 ABIE53_005863 cyclic di-GMP phosphodiesterase Gmr strong 31 64
  Rhodospirillum rubrum S1H Rru_A3560 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 33 62
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS18790 GGDEF domain-containing phosphodiesterase insig. 32 61
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 32 58
  Pseudomonas fluorescens FW300-N2E3 AO353_03970 diguanylate cyclase strong 32 61
  Marinobacter adhaerens HP15 HP15_1689 sensory box/GGDEF family protein insig. 31 60
  Pseudomonas fluorescens SBW25 PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 31 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05360 GGDEF and EAL domain-containing protein insig. 31 62
  Rahnella sp. WP5 EX31_RS08335 cyclic di-GMP phosphodiesterase sig. 31 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 61
  Variovorax sp. SCN45 GFF1592 Response regulator/GGDEF/EAL domain protein insig. 32 62
  Klebsiella pneumoniae MKP103 KDGMDA_00775 diguanylate cyclase sig. 32 63
  Pseudomonas sp. BP01 JOY50_RS14210 bifunctional diguanylate cyclase/phosphodiesterase insig. 31 62
  Burkholderia phytofirmans PsJN BPHYT_RS27100 RNase II stability modulator strong 30 61
  Pseudomonas putida KT2440 PP_0914 GGDEF domain protein strong 31 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 31 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 31 58
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02926 diguanylate cyclase/phosphodiesterase strong 31 61
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 30 60