Homologs of Shew_2778 from Shewanella loihica PV-4

diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 64 100
o Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 64 99
o Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 59 100
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 54 54
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein cofit 47 65
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 48 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS23350 EAL domain-containing protein insig. 47 56
  Magnetospirillum magneticum AMB-1 AMB_RS23380 PAS domain S-box protein insig. 48 56
  Xanthobacter sp. DMC5 GFF1232 hypothetical protein insig. 38 79
  Cupriavidus basilensis FW507-4G11 RR42_RS16480 diguanylate cyclase insig. 49 54
  Cupriavidus basilensis FW507-4G11 RR42_RS09815 diguanylate cyclase insig. 47 55
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 40 67
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 40 68
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 71
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 39 67
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 40 68
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 38 68
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 39 67
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 52 43
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 38 67
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 55
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 38 68
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 39 69
  Pseudomonas sp. RS175 PFR28_04522 hypothetical protein insig. 38 67
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 37 67
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 37 67
  Pseudomonas fluorescens FW300-N2C3 AO356_11995 diguanylate cyclase insig. 38 67
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 38 67
  Pseudomonas sp. DMC3 GFF511 hypothetical protein cofit 38 67
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 45 55
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 69
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 43 55
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 43 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4274 Sensory box/GGDEF family protein insig. 38 67
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 37 68
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 43 62
  Pseudomonas aeruginosa PA14 IKLFDK_26205 diguanylate cyclase insig. 37 67
  Methylophilus sp. DMC18 GFF1905 hypothetical protein insig. 51 45
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein cofit 36 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 78
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 43 57
  Pseudomonas sp. SVBP6 COO64_RS01840 EAL domain-containing protein insig. 36 68
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 35 79
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 35 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 78
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 35 78
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 36 71
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 35 77
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 37 66
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 67
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 40 62
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 38 68
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 35 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 34 78
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 34 78
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 41 56
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 35 78
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 34 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 35 78
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 34 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 34 78
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 54
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 61
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 42 54
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 76
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 78
  Shewanella sp. ANA-3 Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 42 55
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 41 56
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 40 58
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 35 77
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 35 78
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 54
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 41 57
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 55
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 36 69
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 35 77
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 35 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 35 77
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 37 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 35 77
  Methylophilus sp. DMC18 GFF2416 hypothetical protein insig. 50 45
  Acidovorax sp. GW101-3H11 Ac3H11_183 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 56
  Acidovorax sp. GW101-3H11 Ac3H11_402 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 58
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 77
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 41 56
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 41 55
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 67
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 35 76
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 41 56
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 35 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS17290 EAL domain-containing protein strong 33 74
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 40 58
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 59
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 34 70
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 40 56
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 70
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 42 55