Homologs of DVU1082 from Desulfovibrio vulgaris Hildenborough JW710

3- 5 exonuclease domain protein (TIGR)
SEED: Werner syndrome helicase homolog

65 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1082 3- 5 exonuclease domain protein (TIGR) strong 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0883 3'-5' exonuclease (RefSeq) strong 82 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2818 Ribonuclease D sig. 44 94
o Bacteroides stercoris CC31F HMPREF1181_RS05920 3'-5' exonuclease domain-containing protein 2 sig. 36 95
o Bacteroides thetaiotaomicron VPI-5482 BT4332 conserved hypothetical protein (NCBI ptt file) strong 35 95
o Bacteroides ovatus ATCC 8483 BACOVA_05135 3'-5' exonuclease sig. 35 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS13690 3'-5' exonuclease strong 32 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05885 3'-5' exonuclease domain-containing protein 2 strong 32 97
o Phocaeicola dorei CL03T12C01 ABI39_RS18220 3'-5' exonuclease domain-containing protein 2 sig. 32 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4964 3'-5' exonuclease domain protein no data 34 90
o Acinetobacter radioresistens SK82 MPMX26_02848 Ribonuclease D no data 32 93
  Shewanella oneidensis MR-1 SO1153 exonuclease, putative (NCBI ptt file) insig. 39 86
o Acidovorax sp. GW101-3H11 Ac3H11_1019 3'-5' exonuclease insig. 32 92
  Shewanella sp. ANA-3 Shewana3_0980 3'-5' exonuclease (RefSeq) insig. 40 77
  Pseudomonas stutzeri RCH2 Psest_2051 Ribonuclease D insig. 33 81
  Variovorax sp. OAS795 ABID97_RS10205 3'-5' exonuclease insig. 30 79
o Variovorax sp. SCN45 GFF2947 3'-5' exonuclease insig. 30 68
  Rhodospirillum rubrum S1H Rru_A0015 3'-5' exonuclease (NCBI) no data 32 56
  Pseudomonas putida KT2440 PP_4591 Ribonuclease D sig. 31 78
  Azospirillum brasilense Sp245 AZOBR_RS18845 3'-5' exonuclease no data 35 56
  Pseudomonas sp. RS175 PFR28_00712 Ribonuclease D insig. 32 61
  Bosea sp. OAE506 ABIE41_RS16115 ribonuclease D no data 29 82
  Pseudomonas fluorescens FW300-N2C3 AO356_04420 ribonuclease D sig. 32 61
  Pseudomonas fluorescens FW300-N2E3 AO353_17855 ribonuclease D strong 32 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) sig. 32 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) sig. 34 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) insig. 33 54
  Bosea sp. OAE506 ABIE41_RS00145 ribonuclease D no data 32 56
  Azospirillum sp. SherDot2 MPMX19_02663 Ribonuclease D no data 33 72
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18455 ribonuclease D insig. 31 76
  Kangiella aquimarina DSM 16071 B158DRAFT_1574 ribonuclease D insig. 26 83
  Pseudomonas simiae WCS417 PS417_07375 ribonuclease D sig. 33 61
  Rhodopseudomonas palustris CGA009 TX73_000240 ribonuclease D no data 35 44
  Pseudomonas fluorescens SBW25 PFLU_RS07465 ribonuclease D insig. 33 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07465 ribonuclease D strong 33 61
  Rahnella sp. WP5 EX31_RS10595 ribonuclease D insig. 26 76
  Azospirillum sp. SherDot2 MPMX19_00986 Ribonuclease D sig. 28 75
  Dinoroseobacter shibae DFL-12 Dshi_3589 3'-5' exonuclease (RefSeq) no data 30 44
  Escherichia coli BW25113 b1804 rnd ribonuclease D (NCBI) strong 24 77
  Escherichia fergusonii Becca EFB2_02196 Ribonuclease D insig. 24 76
  Escherichia coli ECOR27 NOLOHH_17125 rnd ribonuclease D no data 24 76
  Escherichia coli ECRC101 OKFHMN_26605 rnd ribonuclease D no data 24 76
  Escherichia coli ECRC101 MCAODC_18805 rnd ribonuclease D insig. 24 76
  Escherichia coli ECRC102 NIAGMN_01460 rnd ribonuclease D no data 24 76
  Escherichia coli ECRC62 BNILDI_15910 rnd ribonuclease D insig. 24 76
  Escherichia coli ECRC98 JDDGAC_01180 rnd ribonuclease D no data 24 76
  Escherichia coli ECRC99 KEDOAH_01505 rnd ribonuclease D no data 24 76
  Escherichia coli Nissle 1917 ECOLIN_RS10035 ribonuclease D no data 24 76
  Escherichia coli BL21 ECD_01774 ribonuclease D insig. 24 77
  Rhodospirillum rubrum S1H Rru_A2073 Ribonuclease D (NCBI) no data 26 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01929 Ribonuclease D insig. 24 76
  Escherichia coli ECOR38 HEPCGN_04995 rnd ribonuclease D cofit 24 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08205 ribonuclease D no data 30 75
  Azospirillum brasilense Sp245 AZOBR_RS16220 ribonuclease D insig. 29 75
  Pseudomonas syringae pv. syringae B728a Psyr_1563 Ribonuclease D strong 28 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1563 Ribonuclease D insig. 28 78
  Erwinia tracheiphila SCR3 LU632_RS13130 rnd ribonuclease D insig. 28 76
  Rhodopseudomonas palustris CGA009 TX73_015755 ribonuclease D strong 27 81
  Phaeobacter inhibens DSM 17395 PGA1_c36020 putative 3'-5'-exonuclease insig. 33 44
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0222 ribonuclease D no data 27 86
  Pseudomonas stutzeri RCH2 Psest_2995 ribonuclease D no data 30 78
  Enterobacter sp. TBS_079 MPMX20_02710 Ribonuclease D strong 25 76
  Klebsiella michiganensis M5al BWI76_RS17795 ribonuclease D sig. 25 77
  Magnetospirillum magneticum AMB-1 AMB_RS19900 ribonuclease D no data 30 56
  Enterobacter asburiae PDN3 EX28DRAFT_0755 ribonuclease D strong 25 76