Homologs of Rru_A2793 from Rhodospirillum rubrum S1H

Protein of unknown function DUF1006 (NCBI)
SEED: FIG00822893: hypothetical protein
KEGG: hypothetical protein

72 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A2793 Protein of unknown function DUF1006 (NCBI) insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS08470 winged helix-turn-helix domain-containing protein insig. 49 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08470 winged helix-turn-helix domain-containing protein insig. 49 96
o Azospirillum sp. SherDot2 MPMX19_05603 hypothetical protein insig. 53 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1199 Uncharacterized protein conserved in bacteria insig. 53 96
o Pseudomonas fluorescens FW300-N2E3 AO353_19110 cytoplasmic protein insig. 49 99
o Pseudomonas sp. DMC3 GFF4605 hypothetical protein cofit 50 96
o Pseudomonas protegens RBAN4 FABNJH_21970 Cytoplasmic protein insig. 49 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_270 FIG074102: hypothetical protein insig. 49 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01836 hypothetical protein cofit 48 96
o Sphingobium sp. HT1-2 GFF3882 hypothetical protein cofit 52 94
o Pseudomonas simiae WCS417 PS417_08520 hypothetical protein insig. 48 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2243 FIG074102: hypothetical protein insig. 48 98
o Pseudomonas orientalis W4I3 QF045_RS11240 winged helix-turn-helix domain-containing protein cofit 48 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS32820 winged helix-turn-helix domain-containing protein insig. 52 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2454 FIG074102: hypothetical protein insig. 50 95
o Pseudomonas sp. SVBP6 COO64_RS06020 winged helix-turn-helix domain-containing protein insig. 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_14445 cytoplasmic protein insig. 52 92
o Pseudomonas aeruginosa MRSN321 DY961_RS02775 winged helix-turn-helix domain-containing protein insig. 51 92
o Pseudomonas fluorescens FW300-N2C3 AO356_03125 cytoplasmic protein insig. 50 95
o Pseudomonas segetis P6 ACVTMO_RS09445 winged helix-turn-helix domain-containing protein insig. 47 96
o Pseudomonas sp. RS175 PFR28_00977 hypothetical protein insig. 50 95
o Pseudomonas sp. S08-1 OH686_22470 hypothetical protein insig. 52 93
o Caulobacter crescentus NA1000 CCNA_03433 hypothetical protein cofit 52 96
o Caulobacter crescentus NA1000 Δfur CCNA_03433 hypothetical protein cofit 52 96
o Paraburkholderia graminis OAS925 ABIE53_004698 uncharacterized protein YcaQ insig. 38 90
o Rahnella sp. WP5 EX31_RS18205 winged helix-turn-helix domain-containing protein insig. 36 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03557 hypothetical protein insig. 38 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS17055 winged helix-turn-helix domain-containing protein insig. 37 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3673 FIG004798: Putative cytoplasmic protein insig. 37 89
o Klebsiella pneumoniae MRSN742743 KFA93_RS00880 winged helix-turn-helix domain-containing protein insig. 35 97
o Klebsiella michiganensis M5al BWI76_RS09805 hypothetical protein sig. 35 95
  Klebsiella pneumoniae MKP103 KDGMDA_18005 Winged helix DNA-binding domain-containing protein insig. 34 97
  Serratia liquefaciens MT49 IAI46_08690 YcaQ family DNA glycosylase insig. 35 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS12910 winged helix-turn-helix domain-containing protein cofit 36 96
  Enterobacter asburiae PDN3 EX28DRAFT_2020 Uncharacterized protein conserved in bacteria insig. 35 95
  Phaeobacter inhibens DSM 17395 PGA1_c33880 Uncharacterized protein conserved in bacteria insig. 38 79
  Pantoea sp. MT58 IAI47_12825 YcaQ family DNA glycosylase insig. 36 93
  Acinetobacter baumannii LAC-4 RR41_RS10750 winged helix DNA-binding domain-containing protein insig. 35 93
  Erwinia tracheiphila SCR3 LU632_RS09835 winged helix DNA-binding domain-containing protein insig. 34 95
  Enterobacter sp. TBS_079 MPMX20_01574 hypothetical protein insig. 33 95
  Rhodanobacter sp. FW510-T8 OKGIIK_03585 Winged helix DNA-binding domain-containing protein insig. 36 95
  Agrobacterium fabrum C58 Atu0752 hypothetical protein insig. 35 89
  Shewanella amazonensis SB2B Sama_3101 hypothetical protein (RefSeq) insig. 36 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00515 crosslink repair DNA glycosylase YcaQ family protein insig. 37 90
  Escherichia fergusonii Becca EFB2_03148 hypothetical protein insig. 34 95
  Escherichia coli ECOR38 HEPCGN_23080 ycaQ Uncharacterized protein YcaQ insig. 34 95
  Escherichia coli Nissle 1917 ECOLIN_RS04850 crosslink repair DNA glycosylase YcaQ no data 33 95
  Shewanella oneidensis MR-1 SO4332 conserved hypothetical protein (NCBI ptt file) insig. 35 78
  Escherichia coli ECOR27 NOLOHH_22005 ycaQ Uncharacterized protein YcaQ insig. 33 95
  Escherichia coli ECRC62 BNILDI_20260 ycaQ Uncharacterized protein YcaQ cofit 33 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14760 winged helix DNA-binding domain-containing protein insig. 37 88
  Shewanella sp. ANA-3 Shewana3_0367 hypothetical protein (RefSeq) insig. 35 78
  Escherichia coli BL21 ECD_00920 DUF1006 family protein with C-terminal wHTH domain insig. 33 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02751 hypothetical protein insig. 33 95
  Escherichia coli BW25113 b0916 ycaQ hypothetical protein (NCBI) insig. 33 95
  Rhodanobacter denitrificans MT42 LRK55_RS14475 crosslink repair DNA glycosylase YcaQ family protein insig. 37 88
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13835 winged helix DNA-binding domain-containing protein insig. 37 89
  Sinorhizobium meliloti 1021 SMc00961 hypothetical protein insig. 34 96
  Escherichia coli ECRC100 OKFHMN_05445 ycaQ Uncharacterized protein YcaQ cofit 33 95
  Escherichia coli ECRC101 MCAODC_24835 ycaQ Uncharacterized protein YcaQ insig. 33 95
  Escherichia coli ECRC102 NIAGMN_03165 ycaQ Uncharacterized protein YcaQ insig. 33 95
  Escherichia coli ECRC98 JDDGAC_09055 ycaQ Uncharacterized protein YcaQ insig. 33 95
  Escherichia coli ECRC99 KEDOAH_22290 ycaQ Uncharacterized protein YcaQ no data 33 95
  Cellulophaga baltica 18 M666_RS16300 crosslink repair DNA glycosylase YcaQ family protein insig. 33 93
  Rhizobium sp. OAE497 ABIE40_RS03965 winged helix-turn-helix domain-containing protein insig. 32 89
  Bosea sp. OAE506 ABIE41_RS05795 crosslink repair DNA glycosylase YcaQ family protein insig. 31 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20320 Putative cytoplasmic protein cofit 34 60
  Variovorax sp. OAS795 ABID97_RS11050 crosslink repair DNA glycosylase YcaQ family protein insig. 29 89
  Variovorax sp. SCN45 GFF4811 FIG074102: hypothetical protein insig. 28 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20340 hypothetical protein cofit 38 28
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5558 FIG074102: hypothetical protein insig. 28 80