Homologs of Rru_A0463 from Rhodospirillum rubrum S1H

Alanine racemase-like (NCBI)
SEED: Type III PLP / low-specificity D-threonine aldolase

88 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A0463 Alanine racemase-like (NCBI) insig. 100 100
o Sinorhizobium meliloti 1021 SM_b21134 amino acid processing enzyme, low specificity D-threonine aldolase insig. 63 100
o Agrobacterium fabrum C58 Atu3927 hypothetical protein insig. 50 99
o Rhizobium sp. OAE497 ABIE40_RS21390 D-TA family PLP-dependent enzyme insig. 47 98
o Azospirillum sp. SherDot2 MPMX19_04017 D-threonine aldolase insig. 46 98
o Bosea sp. OAE506 ABIE41_RS21990 D-TA family PLP-dependent enzyme insig. 49 98
  Bosea sp. OAE506 ABIE41_RS05215 DSD1 family PLP-dependent enzyme insig. 39 94
o Fusobacterium nucleatum SB010 HUW76_07335 alanine racemase cofit 28 98
o Dinoroseobacter shibae DFL-12 Dshi_0889 alanine racemase domain protein (RefSeq) insig. 34 98
o Variovorax sp. SCN45 GFF1049 low-specificity D-threonine aldolase insig. 32 98
o Variovorax sp. OAS795 ABID97_RS14455 DSD1 family PLP-dependent enzyme insig. 33 98
o Pantoea sp. MT58 IAI47_00550 alanine racemase insig. 33 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18795 alanine racemase cofit 33 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1662 low-specificity D-threonine aldolase insig. 33 95
o Cupriavidus basilensis FW507-4G11 RR42_RS28440 alanine racemase insig. 36 98
o Acidovorax sp. GW101-3H11 Ac3H11_1814 low-specificity D-threonine aldolase insig. 35 95
  Variovorax sp. SCN45 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) insig. 31 94
o Caulobacter crescentus NA1000 CCNA_03204 alanine racemase cofit 33 96
o Caulobacter crescentus NA1000 Δfur CCNA_03204 alanine racemase cofit 33 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS14275 DSD1 family PLP-dependent enzyme insig. 32 95
  Variovorax sp. SCN45 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) insig. 31 96
o Ralstonia solanacearum GMI1000 RS_RS13550 DSD1 family PLP-dependent enzyme insig. 31 92
o Herbaspirillum seropedicae SmR1 HSERO_RS05720 alanine racemase insig. 30 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03260 D-serine deaminase, pyridoxal phosphate-dependent insig. 32 90
  Cupriavidus basilensis FW507-4G11 RR42_RS33450 alanine racemase insig. 30 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03857 D-threo-3-hydroxyaspartate dehydratase cofit 31 90
o Pseudomonas syringae pv. syringae B728a Psyr_3398 Alanine racemase, N-terminal insig. 30 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3398 Alanine racemase, N-terminal insig. 30 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS16410 DSD1 family PLP-dependent enzyme insig. 31 90
o Burkholderia phytofirmans PsJN BPHYT_RS28865 alanine racemase no data 31 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05660 alanine racemase insig. 30 92
o Ralstonia solanacearum UW163 UW163_RS07965 alanine racemase insig. 30 92
  Variovorax sp. OAS795 ABID97_RS21530 DSD1 family PLP-dependent enzyme insig. 30 93
o Pseudomonas fluorescens SBW25 PFLU_RS19810 DSD1 family PLP-dependent enzyme insig. 30 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19810 DSD1 family PLP-dependent enzyme insig. 30 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS05880 DSD1 family PLP-dependent enzyme cofit 30 90
o Paraburkholderia graminis OAS925 ABIE53_002131 D-serine deaminase-like pyridoxal phosphate-dependent protein insig. 30 97
o Pseudomonas simiae WCS417 PS417_12910 alanine racemase insig. 32 98
o Pseudomonas fluorescens FW300-N2C3 AO356_26790 alanine racemase insig. 29 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_354 Type III PLP / low-specificity D-threonine aldolase insig. 29 87
  Dinoroseobacter shibae DFL-12 Dshi_2109 alanine racemase domain protein (RefSeq) insig. 32 94
o Sphingobium sp. HT1-2 GFF2065 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) cofit 31 94
o Dickeya dadantii 3937 DDA3937_RS05270 DSD1 family PLP-dependent enzyme insig. 30 93
o Serratia liquefaciens MT49 IAI46_02295 amino acid deaminase insig. 28 92
  Agrobacterium fabrum C58 Atu3948 hypothetical protein insig. 31 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4210 Type III PLP / low-specificity D-threonine aldolase insig. 28 85
o Pectobacterium carotovorum WPP14 HER17_RS09810 DSD1 family PLP-dependent enzyme insig. 29 95
  Klebsiella pneumoniae MKP103 KDGMDA_12155 amino acid deaminase insig. 32 74
  Klebsiella michiganensis M5al BWI76_RS03885 hypothetical protein insig. 31 74
o Pseudomonas fluorescens FW300-N2E3 AO353_21740 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 26 92
o Pseudomonas sp. RS175 PFR28_01389 D-threonine aldolase strong 25 92
  Paraburkholderia graminis OAS925 ABIE53_000755 D-serine dehydratase sig. 27 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01893 D-serine dehydratase insig. 27 92
  Variovorax sp. OAS795 ABID97_RS22865 amino acid deaminase insig. 26 94
  Variovorax sp. SCN45 GFF6714 Putative cryptic D-serine deaminase (EC 4.3.1.18) insig. 27 94
  Burkholderia phytofirmans PsJN BPHYT_RS03115 amino acid deaminase insig. 27 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5639 D-serine deaminase (EC 4.3.1.18) insig. 26 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03130 alanine racemase strong 22 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03371 D-threonine aldolase cofit 26 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2867 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) sig. 26 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2047 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 25 92
  Mycobacterium tuberculosis H37Rv Rv1414 Conserved hypothetical protein insig. 38 31
  Pseudomonas fluorescens FW300-N2C3 AO356_00450 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 26 92
o Pseudomonas sp. DMC3 GFF3665 D-threonine aldolase insig. 25 92
  Pseudomonas simiae WCS417 PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 25 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS01950 amino acid deaminase insig. 27 93
  Pseudomonas fluorescens SBW25 PFLU_RS12815 amino acid deaminase cofit 25 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12815 amino acid deaminase strong 25 92
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2091 Predicted amino acid aldolase or racemase insig. 25 98
  Agrobacterium fabrum C58 Atu5233 D-serine deaminase no data 24 92
  Herbaspirillum seropedicae SmR1 HSERO_RS08720 amino acid deaminase insig. 24 90
  Cupriavidus basilensis FW507-4G11 RR42_RS17355 hypothetical protein strong 36 41
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2475 Predicted amino acid aldolase or racemase insig. 24 92
  Pseudomonas syringae pv. syringae B728a Psyr_2509 conserved hypothetical protein insig. 28 48
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2509 conserved hypothetical protein insig. 28 48
  Ralstonia solanacearum GMI1000 RS_RS22850 amino acid deaminase insig. 25 92
o Ralstonia solanacearum PSI07 RPSI07_RS05450 amino acid deaminase insig. 24 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18185 amino acid deaminase insig. 23 93
  Ralstonia solanacearum UW163 UW163_RS20945 amino acid deaminase insig. 23 93
  Pseudomonas sp. SVBP6 COO64_RS13000 YggS family pyridoxal phosphate-dependent enzyme insig. 30 42
  Mycobacterium tuberculosis H37Rv Rv1413 Conserved hypothetical protein insig. 30 40
  Pseudomonas sp. BP01 JOY50_RS20910 YggS family pyridoxal phosphate-dependent enzyme insig. 29 42
  Pseudomonas putida KT2440 PP_5094 putative enzyme with PLP binding domain strong 29 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12625 amino acid deaminase insig. 25 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS19115 amino acid deaminase insig. 28 40
  Pseudomonas sp. S08-1 OH686_10975 Pyridoxal phosphate-containing protein YggS cofit 26 42
  Rahnella sp. WP5 EX31_RS07970 amino acid deaminase insig. 24 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28855 amino acid deaminase insig. 25 94