Conservation of cofitness between Xcc-8004.3041.1 and Xcc-8004.3976.1 in Xanthomonas campestris pv. campestris strain 8004

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3041.1 Dna binding response regulator PrrA (RegA) 1.0 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.65 19
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10115 response regulator transcription factor 0.79 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS00325 response regulator transcription factor 0.78 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF — —
Paraburkholderia graminis OAS925 0.45 ABIE53_000420 two-component system response regulator RegA 0.79 ABIE53_005044 putative AcnD-accessory protein PrpF — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02208 two component transcriptional regulator, Fis family 0.78 H281DRAFT_02982 2-methylaconitate cis-trans isomerase — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS01625 chemotaxis protein CheY 0.78 BPHYT_RS30140 3-methylitaconate isomerase low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS13000 chemotaxis protein CheY 0.77 HSERO_RS11420 3-methylitaconate isomerase — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_5048 Dna binding response regulator PrrA (RegA) 0.78 PfGW456L13_4115 2-methylaconitate cis-trans isomerase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4230 Helix-turn-helix, Fis-type 0.77 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4230 Helix-turn-helix, Fis-type 0.77 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Ralstonia solanacearum UW163 0.42 UW163_RS03965 DNA-binding response regulator 0.79 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS09615 DNA-binding response regulator 0.79 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF low > 76
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_05335 chemotaxis protein CheY 0.79 AO353_00885 3-methylitaconate isomerase — —
Pseudomonas putida KT2440 0.41 PP_0888 Photosynthetic apparatus regulatory protein RegA 0.81 PP_2337 aconitate isomerase 0.27 27
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS05135 response regulator transcription factor 0.81 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1115 Dna binding response regulator PrrA (RegA) 0.78 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase — —
Shewanella oneidensis MR-1 0.41 SO4172 DNA-binding response regulator (NCBI ptt file) 0.76 SO0342 conserved hypothetical protein (NCBI ptt file) low > 76
Ralstonia solanacearum GMI1000 0.41 RS_RS00200 DNA-binding response regulator 0.80 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF low > 80
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07205 chemotaxis protein CheY 0.78 AO356_20880 3-methylitaconate isomerase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS23750 DNA-binding response regulator 0.80 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF low > 81
Pseudomonas sp. RS175 0.41 PFR28_00137 Photosynthetic apparatus regulatory protein RegA 0.78 PFR28_02924 2-methyl-aconitate isomerase — —
Pseudomonas simiae WCS417 0.41 PS417_04100 chemotaxis protein CheY 0.78 PS417_21065 3-methylitaconate isomerase — —
Pseudomonas sp. S08-1 0.41 OH686_08680 Dna binding response regulator PrrA (RegA) 0.78 OH686_01675 probable AcnD-accessory protein PrpF — —
Shewanella sp. ANA-3 0.41 Shewana3_3707 response regulator receiver protein (RefSeq) 0.76 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) low > 73
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04140 response regulator transcription factor 0.77 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04140 response regulator transcription factor 0.77 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3302 Dna binding response regulator PrrA (RegA) 0.79 Pf6N2E2_6064 2-methylaconitate isomerase — —
Pseudomonas stutzeri RCH2 0.41 Psest_3338 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.77 Psest_2318 probable AcnD-accessory protein PrpF — —
Shewanella loihica PV-4 0.41 Shew_3342 two component Fis family transcriptional regulator (RefSeq) 0.73 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1932 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.74 B158DRAFT_1346 2-methylaconitate cis-trans isomerase low > 40
Shewanella amazonensis SB2B 0.39 Sama_3186 response regulator receiver protein (RefSeq) 0.73 Sama_3297 hypothetical protein (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS01085 chemotaxis protein CheY 0.80 RR42_RS11275 3-methylitaconate isomerase low > 128
Azospirillum brasilense Sp245 0.36 AZOBR_RS23150 chemotaxis protein CheY 0.71 AZOBR_RS24310 3-methylitaconate isomerase low > 97
Lysobacter sp. OAE881 0.35 ABIE51_RS09795 response regulator transcription factor 0.81 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3147 Dna binding response regulator PrrA (RegA) 0.75 Ac3H11_2325 2-methylaconitate cis-trans isomerase — —
Marinobacter adhaerens HP15 0.34 HP15_3981 two component transcriptional regulator, Fis family 0.72 HP15_1929 AcnD-accessory protein PrpF — —
Variovorax sp. SCN45 0.34 GFF5672 Dna binding response regulator PrrA (RegA) 0.77 GFF269 2-methylaconitate isomerase 0.70 103
Variovorax sp. OAS795 0.34 ABID97_RS07610 response regulator transcription factor 0.59 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF low > 91

Not shown: 16 genomes with orthologs for Xcc-8004.3041.1 only; 3 genomes with orthologs for Xcc-8004.3976.1 only