Conservation of cofitness between Xcc-8004.4065.1 and Xcc-8004.3660.1 in Xanthomonas campestris pv. campestris strain 8004

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 1.0 Xcc-8004.3660.1 Cold shock protein CspD 0.48 15
Lysobacter sp. OAE881 0.73 ABIE51_RS14235 exopolyphosphatase 0.89 ABIE51_RS13800 cold-shock protein low > 62
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_03775 ppx exopolyphosphatase 0.79 OKGIIK_07815 cspC cold-shock protein — —
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14730 Ppx/GppA phosphatase family protein 0.84 LRK55_RS16740 cold-shock protein — —
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS15015 Ppx/GppA family phosphatase 0.84 LRK54_RS17025 cold-shock protein low > 59
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS00705 Ppx/GppA phosphatase family protein 0.78 ABZR86_RS07090 cold-shock protein — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29090 exopolyphosphatase 0.62 PFLU_RS21685 cold-shock protein low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29090 exopolyphosphatase 0.62 PFLU_RS21685 cold-shock protein low > 109
Pseudomonas simiae WCS417 0.40 PS417_27425 exopolyphosphatase 0.71 PS417_19715 cold-shock protein — —
Marinobacter adhaerens HP15 0.36 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.67 HP15_2054 cold shock, CspA low > 73
Dechlorosoma suillum PS 0.36 Dsui_2813 exopolyphosphatase 0.77 Dsui_0007 cold shock protein low > 51
Enterobacter sp. TBS_079 0.34 MPMX20_03357 Exopolyphosphatase 0.67 MPMX20_01542 Cold shock-like protein CspD low > 85
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0165 exopolyphosphatase 0.67 EX28DRAFT_2052 cold shock domain protein CspD low > 76
Pectobacterium carotovorum WPP14 0.34 HER17_RS06420 exopolyphosphatase 0.66 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE low > 75
Rahnella sp. WP5 0.34 EX31_RS22675 exopolyphosphatase 0.67 EX31_RS18570 cold shock-like protein CspD low > 89
Dickeya dianthicola ME23 0.33 DZA65_RS16050 exopolyphosphatase 0.67 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE low > 75
Serratia liquefaciens MT49 0.33 IAI46_18920 exopolyphosphatase 0.69 IAI46_08505 cold shock-like protein CspD low > 86
Dickeya dianthicola 67-19 0.33 HGI48_RS15230 exopolyphosphatase 0.67 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE — —
Dickeya dadantii 3937 0.33 DDA3937_RS15155 exopolyphosphatase 0.67 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE — —
Acinetobacter radioresistens SK82 0.33 MPMX26_00569 Exopolyphosphatase 0.60 MPMX26_01659 Cold shock-like protein CspG low > 36
Alteromonas macleodii MIT1002 0.33 MIT1002_00871 Exopolyphosphatase 0.65 MIT1002_01832 Cold shock-like protein CspD low > 70
Erwinia tracheiphila SCR3 0.32 LU632_RS08255 ppx exopolyphosphatase 0.67 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF2166 Exopolyphosphatase (EC 3.6.1.11) 0.67 GFF4903 Cold shock protein CspD — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_03775 exopolyphosphatase 0.67 CSW01_05795 cold-shock protein CspD low > 62
Pantoea sp. MT58 0.32 IAI47_05150 exopolyphosphatase 0.66 IAI47_14075 transcription antiterminator/RNA stability regulator CspE low > 76
Klebsiella michiganensis M5al 0.32 BWI76_RS21000 exopolyphosphatase 0.68 BWI76_RS07980 cold-shock protein — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04419 Ppx/GppA phosphatase 0.76 H281DRAFT_01154 cold-shock DNA-binding protein family — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS14105 exopolyphosphatase 0.76 BPHYT_RS10920 cold-shock protein — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS13430 exopolyphosphatase 0.71 RR42_RS37535 cold-shock protein — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS04855 exopolyphosphatase 0.74 QEN71_RS36275 cold-shock protein — —
Escherichia coli ECRC62 0.32 BNILDI_12255 ppx exopolyphosphatase 0.67 BNILDI_20450 cspD cold shock-like protein CspD low > 75
Escherichia coli BW25113 0.32 b2502 ppx exopolyphosphatase (NCBI) 0.67 b0880 cspD cold shock protein homolog (NCBI) low > 76
Escherichia coli ECRC100 0.32 OKFHMN_21795 ppx exopolyphosphatase 0.67 OKFHMN_05800 cspD cold shock-like protein CspD low > 80
Escherichia coli ECOR27 0.32 NOLOHH_13445 ppx exopolyphosphatase 0.67 NOLOHH_22195 cspD cold shock-like protein CspD low > 75
Escherichia coli ECRC99 0.32 KEDOAH_06425 ppx exopolyphosphatase 0.67 KEDOAH_22110 cspD cold shock-like protein CspD — —
Escherichia coli BL21 0.32 ECD_02394 exopolyphosphatase 0.67 ECD_00885 inhibitor of DNA replication, cold shock protein-like protein — —
Escherichia coli ECRC101 0.32 MCAODC_12325 ppx exopolyphosphatase 0.67 MCAODC_25015 cspD cold shock-like protein CspD low > 87
Escherichia coli ECRC102 0.32 NIAGMN_19565 ppx exopolyphosphatase 0.67 NIAGMN_03840 cspD cold shock-like protein CspD — —
Escherichia coli ECRC98 0.32 JDDGAC_25740 ppx exopolyphosphatase 0.67 JDDGAC_09435 cspD cold shock-like protein CspD low > 86
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2313 Exopolyphosphatase 0.65 B158DRAFT_1826 Cold shock proteins low > 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01224 Exopolyphosphatase 0.67 OHPLBJKB_02788 Cold shock-like protein CspD — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS14205 exopolyphosphatase 0.67 ECOLIN_RS04685 cold shock-like protein CspD — —
Escherichia coli ECOR38 0.31 HEPCGN_20960 ppx exopolyphosphatase 0.67 HEPCGN_22885 cspD cold shock-like protein CspD low > 87
Escherichia fergusonii Becca 0.31 EFB2_01396 Exopolyphosphatase 0.67 EFB2_03181 Cold shock-like protein CspD low > 86
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS14060 exopolyphosphatase 0.79 ABZR87_RS19675 cold-shock protein low > 80
Ralstonia solanacearum UW163 0.31 UW163_RS15420 exopolyphosphatase 0.76 UW163_RS20395 cold-shock protein — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS02110 exopolyphosphatase 0.76 RALBFv3_RS18735 cold-shock protein low > 76
Ralstonia solanacearum PSI07 0.31 RPSI07_RS15335 exopolyphosphatase 0.76 RPSI07_RS04860 cold-shock protein — —
Ralstonia solanacearum GMI1000 0.30 RS_RS07710 exopolyphosphatase 0.76 RS_RS22215 cold-shock protein low > 80
Shewanella oneidensis MR-1 0.27 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.65 SO2628 cspD stress response protein CspD (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.66 Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.65 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.67 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS09440 exopolyphosphatase 0.74 HSERO_RS15195 cold-shock protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_0477 Exopolyphosphatase 0.40 Echvi_4666 Cold shock proteins low > 79
Bosea sp. OAE506 0.07 ABIE41_RS16120 exopolyphosphatase 0.57 ABIE41_RS07590 cold-shock protein low > 77

Not shown: 17 genomes with orthologs for Xcc-8004.4065.1 only; 20 genomes with orthologs for Xcc-8004.3660.1 only