Conservation of cofitness between Xcc-8004.2713.1 and Xcc-8004.2744.1 in Xanthomonas campestris pv. campestris strain 8004

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2713.1 Nitrate/nitrite transporter 1.0 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase 0.33 10
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4099 Nitrate/nitrite transporter 0.54 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas stutzeri RCH2 0.64 Psest_1932 nitrite extrusion protein (nitrite facilitator) 0.55 Psest_2034 ATPase related to the helicase subunit of the Holliday junction resolvase low > 67
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2376 nitrate transporter (from data) 0.55 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase low > 103
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_02760 MFS transporter 0.54 AO356_22185 recombination factor protein RarA low > 104
Pseudomonas sp. RS175 0.63 PFR28_01051 Nitrate transporter 0.55 PFR28_02606 Replication-associated recombination protein A 0.21 54
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3839 Nitrate/nitrite transporter 0.54 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22580 NarK/NasA family nitrate transporter 0.55 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22580 NarK/NasA family nitrate transporter 0.55 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2102 Nitrate transporter 0.55 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2102 Nitrate transporter 0.55 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas simiae WCS417 0.61 PS417_20970 MFS transporter 0.55 PS417_16480 recombination factor protein RarA low > 88
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_00795 MFS transporter 0.55 AO353_27640 recombination factor protein RarA low > 101
Pseudomonas sp. S08-1 0.59 OH686_00515 Nitrate transporter NasA 0.55 OH686_00270 Replication-associated recombination protein RarA low > 80
Pseudomonas putida KT2440 0.59 PP_2092 Nitrate transporter 0.56 PP_4002 DNA-dependent ATPase required for recombination low > 96
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_00650 MFS superfamily nitrate/nitrite transporter NarK 0.44 CCNA_01342 ATPase, AAA family low > 67
Caulobacter crescentus NA1000 0.51 CCNA_00650 nitrate transporter (from data) 0.44 CCNA_01342 ATPase, AAA family low > 66
Variovorax sp. OAS795 0.32 ABID97_RS20580 MFS transporter 0.52 ABID97_RS07835 replication-associated recombination protein A low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3668 Nitrate/nitrite transporter 0.45 GFF777 FIG065221: Holliday junction DNA helicase low > 90
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3234 Nitrate/nitrite transporter 0.52 Ac3H11_1696 FIG065221: Holliday junction DNA helicase low > 79
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS18155 major facilitator transporter 0.53 HSERO_RS09515 ATPase AAA low > 78
Ralstonia solanacearum UW163 0.20 UW163_RS18085 NarK/NasA family nitrate transporter 0.52 UW163_RS09525 replication-associated recombination protein A — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS16730 NarK/NasA family nitrate transporter 0.52 RALBFv3_RS04145 replication-associated recombination protein A low > 76
Ralstonia solanacearum PSI07 0.20 RPSI07_RS06715 NarK/NasA family nitrate transporter 0.52 RPSI07_RS13205 replication-associated recombination protein A low > 81
Paraburkholderia graminis OAS925 0.19 ABIE53_005346 NNP family nitrate/nitrite transporter-like MFS transporter 0.52 ABIE53_001292 putative ATPase low > 113
Mycobacterium tuberculosis H37Rv 0.19 Rv1737c Possible nitrate/nitrite transporter NarK2 0.34 Rv2559c Conserved hypothetical alanine leucine valine rich protein 0.21 19
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS08830 MFS transporter 0.52 RR42_RS04355 recombination factor protein RarA low > 128
Ralstonia solanacearum GMI1000 0.19 RS_RS21805 NarK/NasA family nitrate transporter 0.50 RS_RS11735 replication-associated recombination protein A low > 80
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS14015 NarK/NasA family nitrate transporter 0.72 LRK54_RS17320 replication-associated recombination protein A low > 59
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_05325 MFS transporter 0.72 OKGIIK_07580 rarA recombination factor protein RarA low > 52
Rhodanobacter denitrificans MT42 0.18 LRK55_RS13735 nitrate/nitrite transporter 0.71 LRK55_RS17545 replication-associated recombination protein A low > 63
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS10450 nitrate/nitrite transporter 0.52 QEN71_RS03415 replication-associated recombination protein A low > 153
Castellaniella sp019104865 MT123 0.18 ABCV34_RS12010 nitrate/nitrite transporter 0.52 ABCV34_RS07220 replication-associated recombination protein A low > 48
Sinorhizobium meliloti 1021 0.18 SM_b20436 nitrate transporter protein 0.42 SMc01279 recombination factor protein RarA low > 103
Klebsiella michiganensis M5al 0.10 BWI76_RS17340 NarK family nitrate/nitrite MFS transporter 0.51 BWI76_RS09670 recombination factor protein RarA low > 92
Enterobacter sp. TBS_079 0.10 MPMX20_02616 Nitrate/nitrite transporter NarK 0.51 MPMX20_01554 Replication-associated recombination protein A low > 85
Enterobacter asburiae PDN3 0.10 EX28DRAFT_0850 nitrite extrusion protein (nitrite facilitator) 0.51 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.08 GFF2763 Nitrate/nitrite transporter 0.51 GFF4896 FIG065221: Holliday junction DNA helicase low > 78
Mucilaginibacter yixingensis YX-36 DSM 26809 0.08 ABZR88_RS16930 MFS transporter 0.40 ABZR88_RS20285 replication-associated recombination protein A low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.08 Echvi_1913 nitrite extrusion protein (nitrite facilitator) 0.40 Echvi_4603 ATPase related to the helicase subunit of the Holliday junction resolvase low > 79
Serratia liquefaciens MT49 0.08 IAI46_15600 NarK family nitrate/nitrite MFS transporter 0.50 IAI46_08570 replication-associated recombination protein A low > 86
Escherichia coli Nissle 1917 0.08 ECOLIN_RS07390 nitrate transporter NarK 0.51 ECOLIN_RS04745 replication-associated recombination protein RarA low > 55
Escherichia fergusonii Becca 0.08 EFB2_02702 Nitrate/nitrite transporter NarK 0.51 EFB2_03169 Replication-associated recombination protein A low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.08 OHPLBJKB_02460 Nitrate/nitrite transporter NarK 0.51 OHPLBJKB_02776 Replication-associated recombination protein A low > 73
Escherichia coli ECRC98 0.08 JDDGAC_06040 narK nitrate transporter NarK 0.51 JDDGAC_09370 rarA replication-associated recombination protein RarA low > 86
Escherichia coli ECRC102 0.08 NIAGMN_27700 narK nitrate transporter NarK 0.51 NIAGMN_03280 rarA replication-associated recombination protein RarA — —
Escherichia coli ECRC100 0.08 OKFHMN_28535 narK nitrate transporter NarK 0.51 OKFHMN_05560 rarA replication-associated recombination protein RarA low > 80
Escherichia coli BL21 0.08 ECD_01201 nitrate/nitrite transporter 0.51 ECD_00896 recombination intermediate processing DNA-dependent ATPase low > 61
Escherichia coli ECOR27 0.08 NOLOHH_20520 narK nitrate transporter NarK 0.51 NOLOHH_22130 rarA replication-associated recombination protein RarA low > 75
Escherichia coli ECRC99 0.08 KEDOAH_25530 narK nitrate transporter NarK 0.51 KEDOAH_22175 rarA replication-associated recombination protein RarA — —
Escherichia coli BW25113 0.08 b1223 narK nitrate/nitrite transporter (NCBI) 0.51 b0892 ycaJ recombination protein (NCBI) low > 76
Escherichia coli ECRC101 0.08 MCAODC_21725 narK nitrate transporter NarK 0.51 MCAODC_24950 rarA replication-associated recombination protein RarA low > 87
Escherichia coli ECRC62 0.08 BNILDI_18670 narK nitrate transporter NarK 0.51 BNILDI_20385 rarA replication-associated recombination protein RarA low > 75
Escherichia coli ECOR38 0.08 HEPCGN_24995 narK nitrate transporter NarK 0.51 HEPCGN_22950 rarA replication-associated recombination protein RarA low > 87
Pantoea sp. MT58 0.07 IAI47_04250 NarK family nitrate/nitrite MFS transporter 0.51 IAI47_12900 replication-associated recombination protein A low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.07 CA265_RS10010 MFS transporter 0.41 CA265_RS22400 AAA family ATPase low > 88

Not shown: 0 genomes with orthologs for Xcc-8004.2713.1 only; 44 genomes with orthologs for Xcc-8004.2744.1 only