Conservation of cofitness between RR42_RS31760 and RR42_RS04530 in Cupriavidus basilensis FW507-4G11

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS31760 IclR family transcriptional regulator 1.0 RR42_RS04530 pyrimidine permease 0.37 7
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS07510 IclR family transcriptional regulator 0.67 HSERO_RS18085 pyrimidine permease low > 78
Acidovorax sp. GW101-3H11 0.37 Ac3H11_3905 Ferrichrome-iron receptor 0.61 Ac3H11_4891 Uracil permease low > 79
Azospirillum sp. SherDot2 0.24 MPMX19_03246 Ferrichrome outer membrane transporter/phage receptor 0.59 MPMX19_02961 Putative pyrimidine permease RutG low > 112
Variovorax sp. OAS795 0.24 ABID97_RS23370 TonB-dependent siderophore receptor 0.64 ABID97_RS03010 solute carrier family 23 protein low > 91
Pseudomonas simiae WCS417 0.23 PS417_00680 TonB-dependent receptor 0.26 PS417_04430 uracil transporter low > 88
Agrobacterium fabrum C58 0.23 Atu4022 hydroxamate-type ferrisiderophore receptor 0.67 Atu3076 uracil transport protein low > 89
Pseudomonas stutzeri RCH2 0.22 Psest_0380 TonB-dependent siderophore receptor 0.28 Psest_1119 uracil-xanthine permease low > 67
Azospirillum brasilense Sp245 0.22 AZOBR_RS26605 TonB-denpendent receptor 0.23 AZOBR_RS31675 uracil transporter low > 97
Variovorax sp. SCN45 0.22 GFF5295 Ferrichrome-iron receptor 0.64 GFF3368 Pyrimidine permease low > 127
Paraburkholderia graminis OAS925 0.21 ABIE53_001694 iron complex outermembrane receptor protein 0.64 ABIE53_000545 putative pyrimidine permease RutG low > 113
Marinobacter adhaerens HP15 0.21 HP15_3673 ferrichrome outer membrane transporter 0.27 HP15_2307 xanthine/uracil permease low > 73
Serratia liquefaciens MT49 0.21 IAI46_21185 ferrichrome porin FhuA 0.63 IAI46_09025 pyrimidine utilization transport protein G low > 86
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1636 Ferrichrome-iron receptor 0.26 Pf6N2E2_5234 Uracil permease low > 103
Pectobacterium carotovorum WPP14 0.20 HER17_RS17620 TonB-dependent siderophore receptor 0.29 HER17_RS15455 uracil permease low > 75
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04924 iron complex outermembrane recepter protein 0.64 H281DRAFT_02126 uracil-xanthine permease low > 103
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS30735 TonB-dependent siderophore receptor 0.66 QEN71_RS00925 solute carrier family 23 protein low > 153
Pseudomonas sp. RS175 0.20 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.24 PFR28_03642 Uracil permease low > 88
Pseudomonas fluorescens SBW25 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.26 PFLU_RS04480 uracil-xanthine permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.26 PFLU_RS04480 uracil-xanthine permease low > 109
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS20275 TonB-denpendent receptor 0.64 BPHYT_RS01995 pyrimidine permease low > 109
Dickeya dadantii 3937 0.20 DDA3937_RS14700 TonB-dependent siderophore receptor 0.31 DDA3937_RS06035 uracil permease low > 74
Dickeya dianthicola ME23 0.20 DZA65_RS15585 TonB-dependent siderophore receptor 0.30 DZA65_RS06430 uracil permease low > 75
Pseudomonas sp. S08-1 0.20 OH686_01055 Ferrichrome-iron receptor 0.26 OH686_17980 Uracil permease or Uracil:proton symporter UraA low > 80
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_14070 TonB-dependent receptor 0.26 AO356_16560 uracil transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_1813 Ferrichrome-iron receptor 0.26 Pf1N1B4_2933 Uracil permease low > 87
Dickeya dianthicola 67-19 0.19 HGI48_RS14640 TonB-dependent siderophore receptor 0.30 HGI48_RS06080 uracil permease low > 71
Pseudomonas putida KT2440 0.19 PP_3155 putative Outer membrane ferric siderophore receptor 0.25 PP_0745 putative uracil permease low > 96
Klebsiella michiganensis M5al 0.19 BWI76_RS05125 ferrichrome porin FhuA 0.64 BWI76_RS10750 pyrimidine utilization transport protein G low > 92
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.26 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.26 Psyr_0968 Xanthine/uracil permease family low > 86
Dechlorosoma suillum PS 0.19 Dsui_2950 TonB-dependent siderophore receptor 0.26 Dsui_2332 uracil-xanthine permease low > 51
Enterobacter sp. TBS_079 0.18 MPMX20_00608 Ferrichrome outer membrane transporter/phage receptor 0.63 MPMX20_01693 Putative pyrimidine permease RutG low > 85
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_05095 TonB-dependent receptor 0.26 AO353_14850 uracil transporter low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4258 Ferrichrome-iron receptor 0.29 GFF2172 Uracil permease low > 78
Pantoea sp. MT58 0.18 IAI47_15610 ferrichrome porin FhuA 0.62 IAI47_12535 pyrimidine utilization transport protein G low > 76
Rahnella sp. WP5 0.18 EX31_RS03225 ferrichrome porin FhuA 0.62 EX31_RS24060 pyrimidine utilization transport protein G low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 0.64 OHPLBJKB_02660 Putative pyrimidine permease RutG low > 73
Shewanella amazonensis SB2B 0.17 Sama_2875 outer membrane protein (RefSeq) 0.24 Sama_1918 uracil-xanthine permease (RefSeq) low > 62
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.26 PfGW456L13_1596 Uracil permease low > 87
Enterobacter asburiae PDN3 0.17 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.60 EX28DRAFT_1920 pyrimidine utilization transport protein G low > 76
Shewanella sp. ANA-3 0.17 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.25 Shewana3_1641 uracil-xanthine permease (RefSeq) low > 73
Escherichia coli ECOR38 0.17 HEPCGN_08270 fhuA ferrichrome porin FhuA 0.64 HEPCGN_23495 rutG pyrimidine utilization transport protein G low > 87
Shewanella oneidensis MR-1 0.17 SO1156 TonB-dependent receptor (NCBI ptt file) 0.25 SO2879 uraA uracil permease (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_01065 TonB-dependent siderophore receptor 0.26 CSW01_10810 uracil permease low > 62
Escherichia coli BL21 0.17 ECD_00149 ferrichrome outer membrane transporter 0.65 ECD_01009 pyrimidine permease low > 61
Escherichia coli Nissle 1917 0.16 ECOLIN_RS00840 ferrichrome porin FhuA 0.64 ECOLIN_RS26455 pyrimidine utilization transport protein G — —
Escherichia fergusonii Becca 0.16 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 0.64 EFB2_03074 Putative pyrimidine permease RutG low > 86
Escherichia coli ECRC99 0.16 KEDOAH_17835 fhuA ferrichrome porin FhuA 0.64 KEDOAH_23100 rutG pyrimidine utilization transport protein G — —
Escherichia coli ECRC102 0.16 NIAGMN_08170 fhuA ferrichrome porin FhuA 0.64 NIAGMN_23690 rutG pyrimidine utilization transport protein G — —
Escherichia coli ECRC100 0.16 OKFHMN_10320 fhuA ferrichrome porin FhuA 0.64 OKFHMN_04645 rutG pyrimidine utilization transport protein G low > 80
Escherichia coli ECRC98 0.16 JDDGAC_13915 fhuA ferrichrome porin FhuA 0.64 JDDGAC_08255 rutG pyrimidine utilization transport protein G low > 86
Escherichia coli ECRC101 0.16 MCAODC_00835 fhuA ferrichrome porin FhuA 0.64 MCAODC_24030 rutG pyrimidine utilization transport protein G low > 87
Escherichia coli BW25113 0.16 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 0.64 b1006 ycdG putative transport protein (VIMSS) low > 76
Escherichia coli ECOR27 0.16 NOLOHH_02665 fhuA ferrichrome porin FhuA 0.64 NOLOHH_21545 rutG pyrimidine utilization transport protein G low > 75
Escherichia coli ECRC62 0.16 BNILDI_09005 fhuA ferrichrome porin FhuA 0.64 BNILDI_19710 rutG pyrimidine utilization transport protein G low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5752 Ferrichrome-iron receptor 0.63 GFF2000 Uracil permease low > 90
Acinetobacter radioresistens SK82 0.15 MPMX26_01925 Metal-pseudopaline receptor CntO 0.53 MPMX26_03014 Putative pyrimidine permease RutG — —
Bosea sp. OAE506 0.15 ABIE41_RS03600 TonB-dependent siderophore receptor 0.63 ABIE41_RS13010 uracil-xanthine permease family protein low > 77

Not shown: 21 genomes with orthologs for RR42_RS31760 only; 10 genomes with orthologs for RR42_RS04530 only