| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS16225 | | cytosol aminopeptidase | 1.0 | RR42_RS03245 | | D-alanyl-D-alanine carboxypeptidase | 0.44 | 7 |
| Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS12825 | | leucyl aminopeptidase | 0.54 | RPSI07_RS21110 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS12120 | | cytosol aminopeptidase | 0.54 | RS_RS02925 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS00150 | | leucyl aminopeptidase | 0.55 | ABZR87_RS08110 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS09120 | | leucyl aminopeptidase | 0.54 | UW163_RS01390 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS04550 | | leucyl aminopeptidase | 0.54 | RALBFv3_RS12220 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS25205 | | leucyl aminopeptidase | 0.43 | QEN71_RS02470 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.66 | ABIE53_001235 | | leucyl aminopeptidase | 0.45 | ABIE53_003419 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS04795 | | cytosol aminopeptidase | 0.47 | BPHYT_RS16225 | | D-alanyl-D-alanine carboxypeptidase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_00123 | | aminopeptidase A. Metallo peptidase. MEROPS family M17 | 0.45 | H281DRAFT_04181 | | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS15600 | | cytosol aminopeptidase | 0.33 | HSERO_RS16870 | | D-alanyl-D-alanine carboxypeptidase | low | > 78 |
| Dechlorosoma suillum PS | 0.51 | Dsui_3536 | | leucyl aminopeptidase | 0.27 | Dsui_0294 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS08295 | | leucyl aminopeptidase | 0.25 | ABCV34_RS15375 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | — | — |
| Shewanella amazonensis SB2B | 0.48 | Sama_0795 | | leucyl aminopeptidase (RefSeq) | 0.08 | Sama_1744 | | Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) | low | > 62 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_1091 | | aminopeptidase A, Metallo peptidase, MEROPS family M17 | 0.28 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_1091 | | aminopeptidase A, Metallo peptidase, MEROPS family M17 | 0.28 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | low | > 86 |
| Pseudomonas putida KT2440 | 0.47 | PP_0980 | | Probable cytosol aminopeptidase | 0.28 | PP_2098 | | D-alanyl-D-alanine carboxypeptidase | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_4846 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.28 | PfGW456L13_4091 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_04535 | | aminopeptidase | 0.29 | AO353_00765 | | D-alanyl-D-alanine carboxypeptidase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS05235 | | leucyl aminopeptidase | 0.29 | PFLU_RS22535 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS05235 | | leucyl aminopeptidase | 0.29 | PFLU_RS22535 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_5420 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.29 | Pf6N2E2_2344 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 103 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS20855 | pepA | leucyl aminopeptidase | 0.12 | LU632_RS21170 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 74 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_898 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.28 | Pf1N1B4_3846 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 87 |
| Pantoea sp. MT58 | 0.47 | IAI47_16795 | | leucyl aminopeptidase | 0.10 | IAI47_17085 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_17470 | | aminopeptidase | 0.29 | AO356_02595 | | D-alanyl-D-alanine carboxypeptidase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_05165 | | cytosol aminopeptidase | 0.29 | PS417_20920 | | D-alanyl-D-alanine carboxypeptidase | low | > 88 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_3267 | | Leucyl aminopeptidase | 0.11 | EX28DRAFT_3234 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | low | > 76 |
| Escherichia fergusonii Becca | 0.46 | EFB2_04275 | | Cytosol aminopeptidase | 0.11 | EFB2_00641 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 86 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_09980 | pepA | leucyl aminopeptidase | 0.11 | HEPCGN_16915 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 87 |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_04055 | pepA | leucyl aminopeptidase | 0.11 | NOLOHH_09840 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Escherichia coli ECRC62 | 0.46 | BNILDI_07455 | pepA | leucyl aminopeptidase | 0.11 | BNILDI_01695 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_15430 | pepA | leucyl aminopeptidase | 0.11 | JDDGAC_21665 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS24695 | | leucyl aminopeptidase | 0.11 | ECOLIN_RS18325 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 55 |
| Escherichia coli ECRC101 | 0.46 | MCAODC_02295 | pepA | leucyl aminopeptidase | 0.11 | MCAODC_08560 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 87 |
| Escherichia coli ECRC100 | 0.46 | OKFHMN_11790 | pepA | leucyl aminopeptidase | 0.11 | OKFHMN_18040 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 80 |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_16360 | pepA | leucyl aminopeptidase | 0.11 | KEDOAH_10110 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_03776 | | Cytosol aminopeptidase | 0.10 | OHPLBJKB_00518 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 73 |
| Escherichia coli BW25113 | 0.46 | b4260 | pepA | leucyl aminopeptidase (NCBI) | 0.11 | b3182 | dacB | D-alanyl-D-alanine carboxypeptidase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_09640 | pepA | leucyl aminopeptidase | 0.11 | NIAGMN_15800 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Pseudomonas sp. RS175 | 0.46 | PFR28_03528 | | Cytosol aminopeptidase | 0.29 | PFR28_01057 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 88 |
| Escherichia coli BL21 | 0.46 | ECD_04126 | | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor | 0.10 | ECD_03047 | | D-alanyl-D-alanine carboxypeptidase | low | > 61 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_04118 | | Cytosol aminopeptidase | 0.11 | MPMX20_04086 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 85 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS02060 | | leucyl aminopeptidase | 0.12 | DZA65_RS03175 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS01955 | | leucyl aminopeptidase | 0.11 | HGI48_RS03180 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 71 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_02360 | | leucyl aminopeptidase | 0.11 | IAI46_01875 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF949 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.11 | GFF2924 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 78 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS03040 | | leucyl aminopeptidase | 0.11 | BWI76_RS25165 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 92 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_07810 | | Cytosol aminopeptidase PepA | 0.28 | OH686_03105 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1235 | | Leucyl aminopeptidase | 0.29 | Psest_1950 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | low | > 67 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS19450 | | leucyl aminopeptidase | 0.12 | HER17_RS18335 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Marinobacter adhaerens HP15 | 0.44 | HP15_1315 | | leucyl aminopeptidase | 0.20 | HP15_829 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF4309 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.28 | GFF2768 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_2399 | | Cytosol aminopeptidase PepA (EC 3.4.11.1) | 0.29 | Ac3H11_670 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 79 |
| Azospirillum brasilense Sp245 | 0.30 | AZOBR_RS16385 | | aminopeptidase A | 0.06 | AZOBR_RS18340 | | D-alanyl-D-alanine carboxypeptidase | — | — |
Not shown: 26 genomes with orthologs for RR42_RS16225 only; 6 genomes with orthologs for RR42_RS03245 only