Conservation of cofitness between QEN71_RS10560 and QEN71_RS28010 in Paraburkholderia sabiae LMG 24235

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS10560 glycogen debranching protein GlgX 1.0 QEN71_RS28010 glutamate synthase-related protein 0.42 20
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_02812 glycogen operon protein 0.95 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS26285 glycogen debranching protein 0.95 BPHYT_RS17855 glutamate synthase low > 109
Azospirillum sp. SherDot2 0.73 MPMX19_04929 Glycogen operon protein GlgX 0.40 MPMX19_02657 Glutamate synthase [NADPH] large chain low > 112
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) 0.36 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) 0.36 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas sp. RS175 0.68 PFR28_02150 Glycogen operon protein GlgX 0.36 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas sp. S08-1 0.68 OH686_01305 glycogen debranching enzyme GlgX 0.37 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_1073 Glycogen debranching enzyme (EC 3.2.1.-) 0.36 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas putida KT2440 0.68 PP_4055 Glycogen debranching enzyme 0.36 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_26000 glycogen debranching protein 0.36 AO356_09375 glutamate synthase low > 104
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 0.37 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 0.37 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens SBW25 0.67 PFLU_RS16435 glycogen debranching protein GlgX 0.36 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS16435 glycogen debranching protein GlgX 0.36 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_23750 glycogen debranching protein 0.36 AO353_12515 glutamate synthase low > 101
Rhodopseudomonas palustris CGA009 0.66 TX73_017120 glycogen debranching protein GlgX 0.59 TX73_004590 glutamate synthase large subunit
Pseudomonas stutzeri RCH2 0.66 Psest_2167 glycogen debranching enzyme GlgX 0.37 Psest_3711 Glutamate synthase domain 2 low > 67
Pseudomonas simiae WCS417 0.66 PS417_14505 glycogen debranching protein 0.36 PS417_02000 glutamate synthase low > 88
Rahnella sp. WP5 0.63 EX31_RS07170 glycogen debranching protein GlgX 0.39 EX31_RS12515 glutamate synthase large subunit low > 89
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1331.1 Glycogen debranching enzyme (EC 3.2.1.-) 0.36 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 74
Rhizobium sp. OAE497 0.56 ABIE40_RS30515 glycogen debranching protein GlgX 0.60 ABIE40_RS16275 glutamate synthase large subunit
Rhodospirillum rubrum S1H 0.56 Rru_A0505 Glycogen debranching enzyme GlgX (NCBI) 0.39 Rru_A0019 Glutamate synthase (ferredoxin) (NCBI)
Enterobacter asburiae PDN3 0.56 EX28DRAFT_1157 glycogen debranching enzyme GlgX 0.38 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_02327 Glycogen operon protein GlgX 0.37 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Bosea sp. OAE506 0.55 ABIE41_RS13065 glycogen debranching protein GlgX 0.60 ABIE41_RS08565 glutamate synthase large subunit low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF2548 Glycogen debranching enzyme (EC 3.2.1.-) 0.38 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Klebsiella michiganensis M5al 0.55 BWI76_RS14140 glycogen debranching enzyme 0.37 BWI76_RS25315 glutamate synthase large subunit low > 92
Magnetospirillum magneticum AMB-1 0.54 AMB_RS15425 glycogen debranching enzyme GlgX 0.38 AMB_RS02685 glutamate synthase large subunit low > 64
Variovorax sp. SCN45 0.54 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) 0.77 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 127
Variovorax sp. OAS795 0.52 ABID97_RS12155 glycogen debranching protein GlgX 0.77 ABID97_RS23225 glutamate synthase-related protein low > 91
Mucilaginibacter yixingensis YX-36 DSM 26809 0.52 ABZR88_RS11805 glycogen debranching protein GlgX 0.49 ABZR88_RS06905 glutamate synthase large subunit 0.76 17
Shewanella sp. ANA-3 0.49 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) 0.38 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Mycobacterium tuberculosis H37Rv 0.49 Rv1564c Probable maltooligosyltrehalose synthase TreX 0.48 Rv3859c Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT)
Shewanella oneidensis MR-1 0.49 SO1495 glgX glycogen operon protein (NCBI ptt file) 0.38 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Sinorhizobium meliloti 1021 0.49 SM_b21446 glycosyl hydrolase 0.60 SMc04028 glutamate synthase low > 103
Bifidobacterium breve UCC2003 0.49 BBR_RS14330 glycogen debranching enzyme GlgX 0.46 BBR_RS15255 glutamate synthase large subunit low > 34
Shewanella loihica PV-4 0.48 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) 0.38 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) 0.30 49
Escherichia coli ECOR27 0.38 NOLOHH_08680 glgX glycogen debranching protein GlgX 0.37 NOLOHH_09685 gltB glutamate synthase large subunit low > 75
Escherichia coli BW25113 0.38 b3431 glgX glycogen debranching enzyme (NCBI) 0.37 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli ECRC62 0.38 BNILDI_02835 glgX glycogen debranching protein GlgX 0.37 BNILDI_01850 gltB glutamate synthase large subunit low > 75
Serratia liquefaciens MT49 0.38 IAI46_23935 glycogen debranching protein GlgX 0.39 IAI46_22345 glutamate synthase large subunit low > 86
Escherichia coli ECRC99 0.38 KEDOAH_11250 glgX glycogen debranching protein GlgX 0.37 KEDOAH_10265 gltB glutamate synthase large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_00270 Glycogen debranching enzyme 0.37 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Escherichia coli ECOR38 0.38 HEPCGN_15705 glgX glycogen debranching protein GlgX 0.37 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 87
Escherichia coli ECRC98 0.38 JDDGAC_20520 glgX glycogen debranching protein GlgX 0.37 JDDGAC_21510 gltB glutamate synthase large subunit low > 86
Escherichia coli ECRC101 0.38 MCAODC_07420 glgX glycogen debranching protein GlgX 0.37 MCAODC_08405 gltB glutamate synthase large subunit low > 87
Escherichia coli ECRC100 0.38 OKFHMN_16890 glgX glycogen debranching protein GlgX 0.37 OKFHMN_17885 gltB glutamate synthase large subunit low > 80
Escherichia coli ECRC102 0.38 NIAGMN_14660 glgX glycogen debranching protein GlgX 0.37 NIAGMN_15645 gltB glutamate synthase large subunit
Escherichia coli BL21 0.38 ECD_03283 glycogen debranching enzyme 0.37 ECD_03077 glutamate synthase, large subunit low > 61
Escherichia fergusonii Becca 0.38 EFB2_00388 Glycogen debranching enzyme 0.37 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS19635 glycogen debranching protein GlgX 0.37 ECOLIN_RS18475 glutamate synthase large subunit low > 55
Shewanella amazonensis SB2B 0.38 Sama_2452 glycogen operon protein (RefSeq) 0.38 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.37 MIT1002_02398 Glycogen debranching enzyme 0.38 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Pectobacterium carotovorum WPP14 0.37 HER17_RS01490 glycogen debranching protein GlgX 0.38 HER17_RS19910 glutamate synthase large subunit low > 75
Dickeya dadantii 3937 0.36 DDA3937_RS19740 glycogen debranching protein GlgX 0.39 DDA3937_RS01665 glutamate synthase large subunit 0.38 73
Dickeya dianthicola 67-19 0.36 HGI48_RS19850 glycogen debranching protein GlgX 0.38 HGI48_RS01560 glutamate synthase large subunit low > 71
Dickeya dianthicola ME23 0.36 DZA65_RS20925 glycogen debranching protein GlgX 0.38 DZA65_RS01635 glutamate synthase large subunit 0.35 71
Agrobacterium fabrum C58 0.36 Atu4073 glycogen debranching protein 0.60 Atu3784 glutamate synthase large subunit low > 89
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_0086 glgX isoamylase. Glycosyl Hydrolase family 13. 0.39 Synpcc7942_0890 glsF glutamate synthase (ferredoxin)
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_19235 glycogen debranching enzyme GlgX 0.48 CSW01_12020 glutamate synthase large subunit low > 62

Not shown: 5 genomes with orthologs for QEN71_RS10560 only; 32 genomes with orthologs for QEN71_RS28010 only