Conservation of cofitness between QEN71_RS26240 and QEN71_RS05250 in Paraburkholderia sabiae LMG 24235

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26240 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 1.0 QEN71_RS05250 CoA transferase subunit B 0.38 15
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_04724 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase 0.92 H281DRAFT_04496 3-oxoacid CoA-transferase subunit B
Burkholderia phytofirmans PsJN 0.88 BPHYT_RS03720 malonic semialdehyde reductase 0.93 BPHYT_RS13670 succinyl-CoA:3-ketoacid-CoA transferase
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1450 Short-chain alcohol dehydrogenase of unknown specificity 0.63 EX28DRAFT_1709 3-oxoacid CoA-transferase, B subunit low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS08810 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.51 ECOLIN_RS12975 acetate CoA-transferase subunit beta
Escherichia coli ECOR38 0.73 HEPCGN_26930 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.51 HEPCGN_22420 atoA acetate CoA-transferase subunit beta low > 87
Escherichia coli BL21 0.73 ECD_01498 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase 0.51 ECD_02149 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 0.34 50
Escherichia fergusonii Becca 0.73 EFB2_02417 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.51 EFB2_01633 Acetate CoA-transferase subunit beta low > 86
Escherichia coli BW25113 0.73 b1539 ydfG L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) 0.51 b2222 atoA acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (NCBI) low > 76
Escherichia coli ECRC62 0.73 BNILDI_17130 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.62 BNILDI_17480 atoA succinyl-CoA--3-ketoacid-CoA transferase low > 75
Escherichia coli ECOR27 0.73 NOLOHH_18640 ydfG bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.62 NOLOHH_18995 succinyl-CoA--3-ketoacid-CoA transferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02173 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.51 OHPLBJKB_01488 Acetate CoA-transferase subunit beta low > 73
Enterobacter sp. TBS_079 0.73 MPMX20_02099 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 0.62 MPMX20_01911 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 85
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS08960 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG 0.76 ABZR87_RS13765 CoA transferase subunit B
Ralstonia solanacearum GMI1000 0.70 RS_RS03675 NAD(P)-dependent oxidoreductase 0.81 RS_RS07910 CoA transferase subunit B
Ralstonia solanacearum UW163 0.69 UW163_RS00665 NAD(P)-dependent oxidoreductase 0.81 UW163_RS15135 CoA transferase subunit B
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS12900 NAD(P)-dependent oxidoreductase 0.81 RALBFv3_RS01825 CoA transferase subunit B
Ralstonia solanacearum PSI07 0.69 RPSI07_RS20325 NAD(P)-dependent oxidoreductase 0.82 RPSI07_RS15665 CoA transferase subunit B
Castellaniella sp019104865 MT123 0.63 ABCV34_RS03925 SDR family NAD(P)-dependent oxidoreductase 0.81 ABCV34_RS00775 3-oxoacid CoA-transferase subunit B low > 48
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS06135 malonic semialdehyde reductase 0.75 HSERO_RS23185 succinyl-CoA:3-ketoacid-CoA transferase low > 78
Rhodospirillum rubrum S1H 0.59 Rru_A2127 Serine 3-dehydrogenase (NCBI) 0.47 Rru_A1471 Butyrate-acetoacetate CoA-transferase (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0585 Short-chain alcohol dehydrogenase of unknown specificity 0.63 B158DRAFT_2504 3-oxoacid CoA-transferase, B subunit low > 40
Pseudomonas putida KT2440 0.55 PP_0488 putative NADP-dependent dehydrogenase HI_1430 0.61 PP_3123 acetoacetyl CoA-transferase (subunit B) low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR 0.61 Psyr_3238 3-oxoacid CoA-transferase low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_0602 Short-chain dehydrogenase/reductase SDR 0.61 Psyr_3238 3-oxoacid CoA-transferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_08475 hypothetical protein 0.64 AO356_21645 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_3575 Oxidoreductase, short chain dehydrogenase/reductase family 0.64 Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) low > 103
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_117 Oxidoreductase, short chain dehydrogenase/reductase family 0.13 PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.4903.1 Oxidoreductase 0.77 Xcc-8004.4477.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 74
Pseudomonas sp. RS175 0.52 PFR28_05158 Sulfoacetaldehyde reductase 0.64 PFR28_01324 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 88
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_1376 Oxidoreductase, short chain dehydrogenase/reductase family 0.64 Pf1N1B4_5834 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 87
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_13380 hypothetical protein 0.61 AO353_27940 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_0101 Short-chain alcohol dehydrogenase of unknown specificity 0.81 Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) low > 67
Rhodanobacter denitrificans MT42 0.50 LRK55_RS08680 SDR family NAD(P)-dependent oxidoreductase 0.62 LRK55_RS03850 3-oxoacid CoA-transferase subunit B low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS09150 SDR family NAD(P)-dependent oxidoreductase 0.62 LRK54_RS04080 3-oxoacid CoA-transferase subunit B low > 59
Azospirillum sp. SherDot2 0.50 MPMX19_02817 Serine 3-dehydrogenase 0.49 MPMX19_05364 Acetate CoA-transferase subunit beta low > 112
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS02750 SDR family oxidoreductase 0.64 PFLU_RS10580 CoA transferase subunit B low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS02750 SDR family oxidoreductase 0.64 PFLU_RS10580 CoA transferase subunit B low > 109
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2041 Short-chain alcohol dehydrogenase of unknown specificity 0.70 Ga0059261_0263 3-oxoacid CoA-transferase, B subunit low > 68
Bosea sp. OAE506 0.50 ABIE41_RS08870 SDR family NAD(P)-dependent oxidoreductase 0.69 ABIE41_RS01845 3-oxoacid CoA-transferase subunit B low > 77
Pseudomonas simiae WCS417 0.49 PS417_02680 hypothetical protein 0.64 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_00460 NAD(P)-dependent oxidoreductase 0.66 CA264_04620 succinyl-CoA--3-ketoacid-CoA transferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS15110 NAD(P)-dependent oxidoreductase 0.62 CA265_RS06310 succinyl-CoA--3-ketoacid-CoA transferase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_1820 Short-chain alcohol dehydrogenase of unknown specificity 0.64 Echvi_3271 3-oxoacid CoA-transferase, B subunit low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS15830 SDR family NAD(P)-dependent oxidoreductase 0.59 ABZR88_RS05195 3-oxoacid CoA-transferase subunit B low > 71
Mycobacterium tuberculosis H37Rv 0.35 Rv0484c Probable short-chain type oxidoreductase 0.70 Rv2503c Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB (3-oxo-acid:CoA transferase) (OXCT B) (succinyl CoA:3-oxoacid CoA-transferase) low > 58
Fusobacterium nucleatum SB010 0.34 HUW76_08120 SDR family NAD(P)-dependent oxidoreductase 0.50 HUW76_01855 CoA transferase subunit B low > 35
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS03515 SDR family oxidoreductase 0.68 A4249_RS02955 3-oxoacid CoA-transferase subunit B low > 48
Variovorax sp. SCN45 0.27 GFF4612 Short-chain dehydrogenase/reductase SDR 0.76 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 127
Acinetobacter radioresistens SK82 0.26 MPMX26_00858 putative oxidoreductase 0.73 MPMX26_02381 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS36075 oxidoreductase 0.83 RR42_RS06560 succinyl-CoA:3-ketoacid-CoA transferase
Alteromonas macleodii MIT1002 0.25 MIT1002_02198 putative oxidoreductase 0.61 MIT1002_02000 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 70
Acidovorax sp. GW101-3H11 0.20 Ac3H11_2710 short-chain dehydrogenase/reductase SDR 0.72 Ac3H11_131 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)

Not shown: 28 genomes with orthologs for QEN71_RS26240 only; 13 genomes with orthologs for QEN71_RS05250 only