Conservation of cofitness between QEN71_RS08645 and QEN71_RS04500 in Paraburkholderia sabiae LMG 24235

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS08645 GTP cyclohydrolase II 1.0 QEN71_RS04500 RluA family pseudouridine synthase 0.53 15
Paraburkholderia graminis OAS925 0.91 ABIE53_006416 GTP cyclohydrolase II 0.81 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_05415 GTP cyclohydrolase II 0.81 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase — —
Burkholderia phytofirmans PsJN 0.90 BPHYT_RS24715 GTP cyclohydrolase 0.81 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS29255 GTP cyclohydrolase 0.60 RR42_RS14155 pseudouridine synthase low > 128
Marinobacter adhaerens HP15 0.46 HP15_579 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 0.39 HP15_2221 pseudouridine synthase, RluA family — —
Dechlorosoma suillum PS 0.46 Dsui_0717 GTP cyclohydrolase II 0.51 Dsui_2437 pseudouridine synthase, RluA family — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_0049 GTP cyclohydrolase II 0.40 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) — —
Dickeya dianthicola ME23 0.45 DZA65_RS13050 GTP cyclohydrolase II 0.39 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Dickeya dadantii 3937 0.45 DDA3937_RS12545 GTP cyclohydrolase II 0.40 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Dickeya dianthicola 67-19 0.45 HGI48_RS12600 GTP cyclohydrolase II 0.39 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00955 GTP cyclohydrolase II 0.45 ABCV34_RS08415 RluA family pseudouridine synthase — —
Rahnella sp. WP5 0.44 EX31_RS09880 GTP cyclohydrolase II 0.44 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Serratia liquefaciens MT49 0.44 IAI46_13945 GTP cyclohydrolase II 0.42 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Enterobacter sp. TBS_079 0.44 MPMX20_02498 GTP cyclohydrolase-2 0.44 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C — —
Pseudomonas stutzeri RCH2 0.44 Psest_3544 GTP cyclohydrolase II 0.39 Psest_1680 pseudouridine synthase, RluA family — —
Enterobacter asburiae PDN3 0.44 EX28DRAFT_0950 GTP cyclohydrolase II 0.44 EX28DRAFT_1844 pseudouridine synthase, RluA family — —
Shewanella loihica PV-4 0.44 Shew_2446 GTP cyclohydrolase II (RefSeq) 0.42 Shew_1594 RluA family pseudouridine synthase (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS23850 GTP cyclohydrolase 0.59 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C — —
Klebsiella michiganensis M5al 0.43 BWI76_RS11945 GTP cyclohydrolase II 0.44 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase — —
Acinetobacter radioresistens SK82 0.43 MPMX26_02745 GTP cyclohydrolase-2 0.35 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C — —
Shewanella sp. ANA-3 0.43 Shewana3_2600 ribA GTP cyclohydrolase II (RefSeq) 0.43 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF2708 GTP cyclohydrolase II (EC 3.5.4.25) 0.44 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Shewanella amazonensis SB2B 0.43 Sama_1277 ribA GTP cyclohydrolase II (RefSeq) 0.42 Sama_1988 pseudouridylate synthase (RefSeq) — —
Escherichia coli ECRC99 0.43 KEDOAH_26195 ribA GTP cyclohydrolase-2 0.43 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC100 0.43 OKFHMN_02570 ribA GTP cyclohydrolase-2 0.43 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC101 0.43 MCAODC_15695 ribA GTP cyclohydrolase-2 0.43 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR27 0.43 NOLOHH_20235 ribA GTP cyclohydrolase-2 0.44 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pseudomonas sp. S08-1 0.43 OH686_15740 GTP cyclohydrolase II 0.38 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS12530 ribA GTP cyclohydrolase II 0.45 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECOR38 0.43 HEPCGN_25630 ribA GTP cyclohydrolase-2 0.44 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC62 0.43 BNILDI_18385 ribA GTP cyclohydrolase-2 0.44 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BW25113 0.43 b1277 ribA GTP cyclohydrolase II protein (NCBI) 0.44 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) — —
Escherichia coli ECRC98 0.43 JDDGAC_05115 ribA GTP cyclohydrolase-2 0.43 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC102 0.43 NIAGMN_26740 ribA GTP cyclohydrolase-2 0.43 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_02405 GTP cyclohydrolase-2 0.44 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C — —
Escherichia coli BL21 0.43 ECD_01254 GTP cyclohydrolase II 0.44 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4456 GTP cyclohydrolase II 0.39 Psyr_1639 ribosomal large subunit pseudouridine synthase C — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4456 GTP cyclohydrolase II 0.39 Psyr_1639 ribosomal large subunit pseudouridine synthase C — —
Pantoea sp. MT58 0.42 IAI47_09255 GTP cyclohydrolase II 0.42 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli Nissle 1917 0.42 ECOLIN_RS07710 GTP cyclohydrolase II 0.43 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia fergusonii Becca 0.42 EFB2_02648 GTP cyclohydrolase-2 0.44 EFB2_02889 Ribosomal large subunit pseudouridine synthase C — —
Pectobacterium carotovorum WPP14 0.42 HER17_RS09325 GTP cyclohydrolase II 0.42 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pseudomonas putida KT2440 0.41 PP_0522 GTP cyclohydrolase-2 0.39 PP_1906 ribosomal large subunit pseudouridine synthase C — —
Pseudomonas simiae WCS417 0.41 PS417_25230 GTP cyclohydrolase 0.40 PS417_21480 23S rRNA pseudouridylate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS26865 GTP cyclohydrolase II 0.40 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS26865 GTP cyclohydrolase II 0.40 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_06675 GTP cyclohydrolase 0.39 AO353_01405 23S rRNA pseudouridylate synthase — —
Pseudomonas sp. RS175 0.41 PFR28_03941 Riboflavin biosynthesis protein 0.40 PFR28_03018 Ribosomal large subunit pseudouridine synthase C — —
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4927 GTP cyclohydrolase II (EC 3.5.4.25) 0.40 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2657 GTP cyclohydrolase II (EC 3.5.4.25) 0.38 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1321 GTP cyclohydrolase II (EC 3.5.4.25) 0.39 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_14970 GTP cyclohydrolase 0.40 AO356_20125 23S rRNA pseudouridylate synthase — —
Alteromonas macleodii MIT1002 0.40 MIT1002_00144 GTP cyclohydrolase-2 0.43 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS03435 GTP cyclohydrolase II 0.33 ABZR86_RS02725 RluA family pseudouridine synthase 0.32 54
Ralstonia solanacearum UW163 0.30 UW163_RS21235 GTP cyclohydrolase II RibA 0.60 UW163_RS11840 RluA family pseudouridine synthase — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS17905 GTP cyclohydrolase II RibA 0.60 RALBFv3_RS14375 RluA family pseudouridine synthase low > 76

Not shown: 1 genomes with orthologs for QEN71_RS08645 only; 24 genomes with orthologs for QEN71_RS04500 only