Conservation of cofitness between Psyr_3856 and Psyr_4473 in Pseudomonas syringae pv. syringae B728a

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3856 Helicase c2 1.0 Psyr_4473 OmpW 0.57 6
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3856 Helicase c2 1.00 Psyr_4473 OmpW low > 86
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.46 Pf6N2E2_4909 Outer membrane protein W precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_05425 ATP-dependent DNA helicase DinG 0.47 AO356_14880 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.93 PS417_06510 ATP-dependent DNA helicase DinG 0.52 PS417_25315 membrane protein low > 88
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.48 PfGW456L13_1302 Outer membrane protein W precursor low > 87
Pseudomonas fluorescens SBW25 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.47 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_17020 ATP-dependent DNA helicase DinG 0.52 AO353_06765 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.47 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas sp. RS175 0.93 PFR28_00520 ATP-dependent DNA helicase DinG 0.48 PFR28_03959 Outer membrane protein W low > 88
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.46 Pf1N1B4_2639 Outer membrane protein W precursor — —
Pseudomonas sp. S08-1 0.89 OH686_04830 ATP-dependent helicase DinG/Rad3 0.51 OH686_15635 Outer membrane protein W precursor low > 80
Pseudomonas putida KT2440 0.88 PP_1125 putative Helicase 0.67 PP_0504 Outer membrane protein OprG 0.20 62
Pseudomonas stutzeri RCH2 0.88 Psest_2857 Rad3-related DNA helicases 0.52 Psest_3571 Outer membrane protein W low > 67
Marinobacter adhaerens HP15 0.45 HP15_1856 helicase c2 0.46 HP15_3604 outer membrane protein OmpW low > 73
Shewanella sp. ANA-3 0.34 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.44 Shewana3_2775 outer membrane protein W (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) 0.41 SO1673 outer membrane protein OmpW, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.33 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.42 Shew_2554 outer membrane protein W (RefSeq) low > 60
Shewanella amazonensis SB2B 0.32 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.41 Sama_1371 outer membrane protein W (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_09290 ATP-dependent DNA helicase DinG 0.43 CSW01_18465 outer membrane protein W low > 62
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 0.17 Ac3H11_541 Outer membrane protein W precursor — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2695 ATP-dependent helicase DinG/Rad3 0.18 GFF1690 Outer membrane protein W precursor low > 90
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 0.22 Xcc-8004.1234.1 Outer membrane protein W precursor low > 74
Klebsiella michiganensis M5al 0.22 BWI76_RS08920 ATP-dependent DNA helicase DinG 0.40 BWI76_RS11810 outer membrane protein OmpW low > 92
Enterobacter asburiae PDN3 0.22 EX28DRAFT_2193 Rad3-related DNA helicases 0.40 EX28DRAFT_0927 Outer membrane protein W low > 76
Escherichia fergusonii Becca 0.22 EFB2_03306 ATP-dependent DNA helicase DinG 0.39 EFB2_02669 Outer membrane protein W low > 86
Escherichia coli Nissle 1917 0.22 ECOLIN_RS04255 ATP-dependent DNA helicase DinG 0.39 ECOLIN_RS07580 outer membrane protein OmpW — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF697 ATP-dependent helicase DinG/Rad3 0.40 GFF2731 Outer membrane protein W precursor low > 78
Escherichia coli ECRC62 0.22 BNILDI_20910 dinG ATP-dependent DNA helicase DinG 0.40 BNILDI_18500 ompW outer membrane protein OmpW low > 75
Escherichia coli ECOR27 0.22 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG 0.40 NOLOHH_20355 ompW outer membrane protein OmpW low > 75
Escherichia coli BL21 0.22 ECD_00766 ATP-dependent DNA helicase 0.40 ECD_01230 outer membrane protein W low > 61
Escherichia coli ECRC100 0.22 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG 0.40 OKFHMN_28695 ompW outer membrane protein OmpW low > 80
Escherichia coli ECRC98 0.22 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG 0.40 JDDGAC_05880 ompW outer membrane protein OmpW low > 86
Escherichia coli BW25113 0.22 b0799 dinG ATP-dependent DNA helicase (NCBI) 0.40 b1256 ompW outer membrane protein W (NCBI) low > 76
Escherichia coli ECRC102 0.22 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG 0.40 NIAGMN_27540 ompW outer membrane protein OmpW — —
Escherichia coli ECRC101 0.22 MCAODC_25495 dinG ATP-dependent DNA helicase DinG 0.40 MCAODC_21565 ompW outer membrane protein OmpW low > 87
Escherichia coli ECRC99 0.22 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG 0.40 KEDOAH_25690 ompW outer membrane protein OmpW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_02914 putative ATP-dependent helicase DinG 0.40 OHPLBJKB_02427 Outer membrane protein W low > 73
Escherichia coli ECOR38 0.22 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG 0.40 HEPCGN_25160 ompW outer membrane protein OmpW low > 87
Enterobacter sp. TBS_079 0.22 MPMX20_01426 ATP-dependent DNA helicase DinG 0.40 MPMX20_02571 Outer membrane protein W low > 85
Pectobacterium carotovorum WPP14 0.21 HER17_RS13230 ATP-dependent DNA helicase DinG 0.38 HER17_RS10950 outer membrane protein OmpW low > 75
Dickeya dadantii 3937 0.21 DDA3937_RS08765 ATP-dependent DNA helicase DinG 0.39 DDA3937_RS10450 outer membrane protein OmpW low > 74
Dickeya dianthicola ME23 0.21 DZA65_RS09155 ATP-dependent DNA helicase DinG 0.39 DZA65_RS10930 outer membrane protein OmpW 0.38 17
Dickeya dianthicola 67-19 0.21 HGI48_RS08850 ATP-dependent DNA helicase DinG 0.40 HGI48_RS10450 outer membrane protein OmpW low > 71
Serratia liquefaciens MT49 0.20 IAI46_07445 ATP-dependent DNA helicase DinG 0.42 IAI46_14055 outer membrane protein OmpW low > 86
Pantoea sp. MT58 0.20 IAI47_13295 ATP-dependent DNA helicase DinG 0.40 IAI47_09155 outer membrane protein OmpW low > 76
Rahnella sp. WP5 0.20 EX31_RS19020 ATP-dependent DNA helicase DinG 0.38 EX31_RS09990 outer membrane protein OmpW low > 89
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_2492 Rad3-related DNA helicases 0.36 B158DRAFT_2223 Outer membrane protein W low > 40
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS07580 helicase 0.19 RR42_RS20315 membrane protein low > 128
Alteromonas macleodii MIT1002 0.14 MIT1002_02593 putative ATP-dependent helicase DinG 0.40 MIT1002_00027 Outer membrane protein W precursor low > 70
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.18 H281DRAFT_05618 outer membrane protein low > 103
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS06060 ATP-dependent DNA helicase 0.18 QEN71_RS28020 OmpW family outer membrane protein low > 153
Ralstonia solanacearum PSI07 0.09 RPSI07_RS15960 ATP-dependent DNA helicase 0.20 RPSI07_RS08300 OmpW family protein — —
Paraburkholderia graminis OAS925 0.09 ABIE53_002724 ATP-dependent DNA helicase DinG 0.19 ABIE53_000023 outer membrane protein low > 113
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS14855 helicase 0.20 HSERO_RS16010 membrane protein 0.45 24
Caulobacter crescentus NA1000 Δfur 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.22 CCNA_01475 OmpW family outer membrane cation channel low > 67
Caulobacter crescentus NA1000 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.22 CCNA_01475 OmpW family outer membrane cation channel low > 66

Not shown: 7 genomes with orthologs for Psyr_3856 only; 12 genomes with orthologs for Psyr_4473 only