Conservation of cofitness between Psyr_2689 and Psyr_3297 in Pseudomonas syringae pv. syringae B728a

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 1.0 Psyr_3297 CheW protein 0.34 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 1.00 Psyr_3297 CheW protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.92 AO353_19285 chemotaxis protein CheW low > 101
Rahnella sp. WP5 0.68 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 EX31_RS11205 chemotaxis protein CheV low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 HER17_RS13880 chemotaxis protein low > 75
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 IJEDHG_26420 chemotaxis protein CheV low > 61
Erwinia tracheiphila SCR3 0.67 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 LU632_RS16610 chemotaxis protein low > 74
Dickeya dadantii 3937 0.66 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 DDA3937_RS08090 chemotaxis protein CheV low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.29 HGI48_RS07815 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.29 DZA65_RS08410 chemotaxis protein CheV low > 75
Enterobacter sp. TBS_079 0.66 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.29 MPMX20_03205 Chemotaxis protein CheV low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.29 EX28DRAFT_0335 Chemotaxis signal transduction protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.30 GFF1876 Chemotaxis protein CheV (EC 2.7.3.-) low > 78
Pantoea sp. MT58 0.65 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 IAI47_15065 chemotaxis protein CheV low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.30 PagCFBP13505_RS10095 chemotaxis protein CheV low > 74
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.30 RR42_RS27090 chemotaxis protein CheV low > 128
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.92 GEMAOFIL_04123 Chemotaxis protein CheV low > 93
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS10435 aminotransferase DegT 0.30 HSERO_RS09765 chemotaxis protein CheV — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.30 H281DRAFT_04914 CheW protein — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.31 QEN71_RS38230 chemotaxis protein — —
Pseudomonas simiae WCS417 0.33 PS417_27245 aminotransferase DegT 0.92 PS417_19615 chemotaxis protein CheW low > 88
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS08930 aminotransferase DegT 0.29 BPHYT_RS07045 chemotaxis protein CheV — —
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.92 PFLU_RS21585 chemotaxis protein CheV low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.92 PFLU_RS21585 chemotaxis protein CheV low > 109
Paraburkholderia graminis OAS925 0.32 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.30 ABIE53_001701 two-component system chemotaxis response regulator CheV — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.32 RPSI07_RS02100 chemotaxis protein CheV — —
Ralstonia solanacearum GMI1000 0.30 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.32 RS_RS19975 chemotaxis protein CheV — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.31 RALBFv3_RS20690 chemotaxis protein CheV — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.32 ABZR87_RS21330 chemotaxis protein low > 80
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.92 Pf1N1B4_229 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas sp. DMC3 0.29 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.92 GFF4567 Chemotaxis protein CheV low > 89
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.93 Pf6N2E2_2415 Chemotaxis protein CheV (EC 2.7.3.-) low > 103
Alteromonas macleodii MIT1002 0.28 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.57 MIT1002_02830 Chemotaxis protein CheV low > 70
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.93 PfGW456L13_2280 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas stutzeri RCH2 0.26 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.83 Psest_1842 Chemotaxis signal transduction protein — —
Pseudomonas sp. RS175 0.25 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.92 PFR28_01012 Chemotaxis protein CheV — —
Shewanella sp. ANA-3 0.25 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.61 Shewana3_2462 response regulator receiver modulated CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) 0.61 SO1989 cheV-1 chemotaxis protein CheV (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.23 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.60 Shew_2144 response regulator receiver modulated CheW protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01285 perosamine synthetase 0.60 CSW01_10015 chemotaxis protein CheV low > 62
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_03400 aminotransferase DegT 0.92 AO356_02950 chemotaxis protein CheW low > 104
Pseudomonas sp. BP01 0.21 JOY50_RS13140 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.91 JOY50_RS25005 chemotaxis protein CheV low > 84
Acidovorax sp. GW101-3H11 0.19 Ac3H11_1545 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.32 Ac3H11_3513 Chemotaxis protein CheV (EC 2.7.3.-) low > 79

Not shown: 60 genomes with orthologs for Psyr_2689 only; 5 genomes with orthologs for Psyr_3297 only