| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3177 | | Recombination protein MgsA | 1.0 | Psyr_2969 | | RND efflux system, outer membrane lipoprotein, NodT | 0.31 | 14 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3177 | | Recombination protein MgsA | 1.00 | Psyr_2969 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_22185 | | recombination factor protein RarA | 0.75 | AO356_27610 | | RND transporter | low | > 104 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_02606 | | Replication-associated recombination protein A | 0.75 | PFR28_01727 | | Outer membrane protein OprM | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_4062 | | FIG065221: Holliday junction DNA helicase | 0.79 | Pf1N1B4_4863 | | Outer membrane protein OprN | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_299 | | FIG065221: Holliday junction DNA helicase | 0.77 | Pf6N2E2_949 | | Outer membrane protein OprN | low | > 103 |
| Pseudomonas putida KT2440 | 0.91 | PP_4002 | | DNA-dependent ATPase required for recombination | 0.78 | PP_3427 | | Multidrug efflux RND outer membrane protein OprN | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_27640 | | recombination factor protein RarA | 0.73 | AO353_23955 | | RND transporter | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS18520 | | replication-associated recombination protein A | 0.76 | PFLU_RS14255 | | TolC family protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2653 | | FIG065221: Holliday junction DNA helicase | 0.79 | PfGW456L13_3059 | | Outer membrane protein OprN | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS18520 | | replication-associated recombination protein A | 0.76 | PFLU_RS14255 | | TolC family protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_16480 | | recombination factor protein RarA | 0.76 | PS417_13185 | | RND transporter | low | > 88 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_00270 | | Replication-associated recombination protein RarA | 0.72 | OH686_01000 | | Multidrug efflux system, outer membrane factor lipoprotein | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_2034 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.70 | Psest_2143 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 67 |
| Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_1819 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.17 | B158DRAFT_0952 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 40 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_01554 | | Replication-associated recombination protein A | 0.24 | MPMX20_01451 | | Toluene efflux pump outer membrane protein TtgI | low | > 85 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_2040 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.25 | EX28DRAFT_2165 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_2052 | | recombination factor protein RarA (RefSeq) | 0.24 | Shewana3_1918 | | outer membrane efflux protein (RefSeq) | low | > 73 |
| Rahnella sp. WP5 | 0.59 | EX31_RS18515 | | replication-associated recombination protein A | 0.27 | EX31_RS10805 | | efflux transporter outer membrane subunit | low | > 89 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_08570 | | replication-associated recombination protein A | 0.25 | IAI46_13390 | | TolC family protein | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS09755 | | replication-associated recombination protein A | 0.26 | LU632_RS09495 | | efflux transporter outer membrane subunit | low | > 74 |
| Pantoea sp. MT58 | 0.58 | IAI47_12900 | | replication-associated recombination protein A | 0.24 | IAI47_13160 | | efflux transporter outer membrane subunit | low | > 76 |
| Paraburkholderia graminis OAS925 | 0.58 | ABIE53_001292 | | putative ATPase | 0.24 | ABIE53_002589 | | NodT family efflux transporter outer membrane factor (OMF) lipoprotein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS03415 | | replication-associated recombination protein A | 0.26 | QEN71_RS09280 | | efflux transporter outer membrane subunit | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS09515 | | ATPase AAA | 0.21 | HSERO_RS15975 | | RND transporter | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_00180 | | Recombination protein MgsA | 0.26 | H281DRAFT_04936 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 103 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1694 | | AAA ATPase | 0.28 | Dsui_3175 | | efflux transporter, outer membrane factor lipoprotein, NodT family | — | — |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS07220 | | replication-associated recombination protein A | 0.23 | ABCV34_RS01305 | | efflux transporter outer membrane subunit | low | > 48 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.54 | Xcc-8004.2744.1 | | FIG065221: Holliday junction DNA helicase | 0.41 | Xcc-8004.3475.1 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 74 |
| Variovorax sp. SCN45 | 0.54 | GFF6034 | | Replication-associated recombination protein RarA | 0.37 | GFF3508 | | Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system | low | > 127 |
| Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_07580 | rarA | recombination factor protein RarA | 0.42 | OKGIIK_14960 | tolC | RND transporter | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS01825 | | replication-associated recombination protein A | 0.37 | ABZR86_RS15395 | | efflux transporter outer membrane subunit | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS17320 | | replication-associated recombination protein A | 0.40 | LRK54_RS08145 | | TolC family protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS17545 | | replication-associated recombination protein A | 0.40 | LRK55_RS07895 | | TolC family protein | low | > 63 |
| Lysobacter sp. OAE881 | 0.52 | ABIE51_RS11445 | | replication-associated recombination protein A | 0.30 | ABIE51_RS01070 | | efflux transporter outer membrane subunit | low | > 62 |
| Agrobacterium fabrum C58 | 0.47 | Atu1914 | | ATPase, AAA family protein | 0.25 | Atu2552 | | nodulation protein T precursor | — | — |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS08045 | | replication-associated recombination protein A | 0.23 | ABIE40_RS15365 | | efflux transporter outer membrane subunit | — | — |
| Rhodopseudomonas palustris CGA009 | 0.47 | TX73_016655 | | replication-associated recombination protein A | 0.21 | TX73_021275 | | efflux transporter outer membrane subunit | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF777 | | FIG065221: Holliday junction DNA helicase | 0.23 | GFF4169 | | Outer membrane component of tripartite multidrug resistance system | low | > 90 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS17620 | | replication-associated recombination protein A | 0.24 | AMB_RS09475 | | outer membrane protein | low | > 64 |
| Bosea sp. OAE506 | 0.45 | ABIE41_RS14690 | | replication-associated recombination protein A | 0.26 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | low | > 77 |
| Bacteroides ovatus ATCC 8483 | 0.42 | BACOVA_03971 | | ATPase, AAA family | 0.21 | BACOVA_02605 | | efflux transporter, outer membrane factor lipoprotein, NodT family | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.41 | BT1205 | | putative ATPase, AAA family (NCBI ptt file) | 0.21 | BT0884 | | outer membrane efflux protein oprM precursor (NCBI ptt file) | low | > 81 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.33 | DVU1686 | | ATPase, AAA family (TIGR) | 0.25 | DVU3246 | | RND efflux system, outer membrane protein, NodT family (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.32 | DvMF_0339 | | recombination factor protein RarA (RefSeq) | 0.27 | DvMF_2159 | | RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) | low | > 51 |
Not shown: 55 genomes with orthologs for Psyr_3177 only; 0 genomes with orthologs for Psyr_2969 only