Conservation of cofitness between Psyr_3886 and Psyr_2464 in Pseudomonas syringae pv. syringae B728a

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3886 methionyl-tRNA synthetase 1.0 Psyr_2464 methionine synthase (B12-dependent) 0.40 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3886 methionyl-tRNA synthetase 1.00 Psyr_2464 methionine synthase (B12-dependent) — —
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_733 Methionyl-tRNA synthetase (EC 6.1.1.10) 0.92 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.40 9
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1759 Methionyl-tRNA synthetase (EC 6.1.1.10) 0.92 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_04055 methionine--tRNA ligase 0.92 AO353_21615 methionine synthase low > 101
Pseudomonas sp. DMC3 0.90 GFF5082 Methionine--tRNA ligase 0.92 GFF3687 Methionine synthase — —
Pseudomonas sp. RS175 0.90 PFR28_03343 Methionine--tRNA ligase 0.93 PFR28_01369 Methionine synthase — —
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_18375 methionine--tRNA ligase 0.93 AO356_00545 methionine synthase — —
Pseudomonas fluorescens SBW25 0.89 PFLU_RS05750 methionine--tRNA ligase 0.92 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS05750 methionine--tRNA ligase 0.92 PFLU_RS13000 methionine synthase low > 109
Pseudomonas sp. SVBP6 0.89 COO64_RS16915 metG methionine--tRNA ligase 0.88 COO64_RS24910 metH methionine synthase — —
Pseudomonas lactucae CFBP13502 0.89 GEMAOFIL_01320 Methionine--tRNA ligase 0.92 GEMAOFIL_02709 Methionine synthase low > 96
Pseudomonas putida KT2440 0.89 PP_1097 Methionine--tRNA ligase 0.88 PP_2375 cobalamin-dependent methionine synthase low > 96
Pseudomonas simiae WCS417 0.89 PS417_05665 methionine--tRNA ligase 0.92 PS417_12310 methionine synthase — —
Pseudomonas sp. BP01 0.88 JOY50_RS24020 metG methionine--tRNA ligase 0.88 JOY50_RS10720 metH methionine synthase low > 84
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5600 Methionyl-tRNA synthetase (EC 6.1.1.10) 0.93 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) — —
Pseudomonas segetis P6 0.86 ACVTMO_RS07230 metG methionine--tRNA ligase 0.88 ACVTMO_RS12855 metH methionine synthase — —
Pseudomonas sp. S08-1 0.85 OH686_03860 Methionyl-tRNA synthetase 0.86 OH686_03335 methionine synthase — —
Pseudomonas aeruginosa PA14 0.85 IKLFDK_17870 methionine--tRNA ligase 0.86 IKLFDK_08975 methionine synthase — —
Pseudomonas aeruginosa PUPa3 0.85 DQ20_RS41560 metG;go_function=nucleotide methionine--tRNA ligase 0.86 DQ20_RS55030 metH;go_function=zinc methionine synthase — —
Pseudomonas aeruginosa MRSN321 0.85 DY961_RS15500 metG;go_function=nucleotide methionine--tRNA ligase 0.86 DY961_RS20955 metH;go_function=zinc methionine synthase — —
Pseudomonas stutzeri RCH2 0.84 Psest_3047 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain 0.86 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0439 methionyl-tRNA synthetase (EC 6.1.1.10) 0.64 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) — —
Rahnella sp. WP5 0.66 EX31_RS11555 methionine--tRNA ligase 0.65 EX31_RS11760 methionine synthase — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS12395 methionine--tRNA ligase 0.64 ECOLIN_RS23160 methionine synthase — —
Klebsiella pneumoniae MKP103 0.66 KDGMDA_26475 methionine--tRNA ligase 0.64 KDGMDA_10165 methionine synthase low > 95
Escherichia coli ECOR38 0.66 HEPCGN_02705 metG methionine--tRNA ligase 0.64 HEPCGN_11885 metH methionine synthase low > 88
Escherichia coli ECRC62 0.66 BNILDI_14255 metG methionine--tRNA ligase 0.64 BNILDI_06140 metH methionine synthase — —
Escherichia coli ECOR27 0.66 NOLOHH_15305 metG methionine--tRNA ligase 0.64 NOLOHH_05380 metH methionine synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01596 Methionine--tRNA ligase 0.64 OHPLBJKB_04030 Methionine synthase — —
Escherichia coli ECRC101 0.66 MCAODC_21155 metG methionine--tRNA ligase 0.64 MCAODC_03740 metH methionine synthase low > 87
Escherichia coli ECRC99 0.66 KEDOAH_04160 metG methionine--tRNA ligase 0.64 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC98 0.66 JDDGAC_28115 metG methionine--tRNA ligase 0.64 JDDGAC_16865 metH methionine synthase — —
Escherichia coli ECRC100 0.66 OKFHMN_24005 metG methionine--tRNA ligase 0.64 OKFHMN_13240 metH methionine synthase — —
Pectobacterium carotovorum WPP14 0.66 HER17_RS14660 methionine--tRNA ligase 0.65 HER17_RS02310 methionine synthase low > 75
Escherichia coli ECRC102 0.66 NIAGMN_21950 metG methionine--tRNA ligase 0.64 NIAGMN_10990 metH methionine synthase — —
Shewanella loihica PV-4 0.66 Shew_1573 metG methionyl-tRNA synthetase (RefSeq) 0.62 Shew_0710 metH B12-dependent methionine synthase (RefSeq) — —
Escherichia coli BW25113 0.66 b2114 metG methionyl-tRNA synthetase (NCBI) 0.64 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.66 EFB2_01742 Methionine--tRNA ligase 0.64 EFB2_04592 Methionine synthase low > 86
Enterobacter sp. TBS_079 0.66 MPMX20_03090 Methionine--tRNA ligase 0.64 MPMX20_00235 Methionine synthase low > 85
Escherichia coli BL21 0.66 ECD_02044 methionyl-tRNA synthetase 0.64 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Shewanella amazonensis SB2B 0.66 Sama_2049 metG methionyl-tRNA synthetase (RefSeq) 0.62 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.33 43
Serratia liquefaciens MT49 0.66 IAI46_07960 methionine--tRNA ligase 0.65 IAI46_23155 methionine synthase low > 87
Klebsiella michiganensis M5al 0.66 BWI76_RS19425 methionine--tRNA ligase 0.65 BWI76_RS01685 methionine synthase — —
Pantoea sp. MT58 0.66 IAI47_06775 methionine--tRNA ligase 0.65 IAI47_17990 methionine synthase — —
Dickeya dadantii 3937 0.65 DDA3937_RS06675 methionine--tRNA ligase 0.64 DDA3937_RS19040 methionine synthase — —
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS00875 methionine--tRNA ligase 0.65 PagCFBP13505_RS22305 methionine synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF3824 Methionyl-tRNA synthetase (EC 6.1.1.10) 0.65 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) — —
Dickeya dianthicola 67-19 0.65 HGI48_RS06695 methionine--tRNA ligase 0.64 HGI48_RS19130 methionine synthase — —
Shewanella sp. ANA-3 0.65 Shewana3_1760 metG methionyl-tRNA synthetase (RefSeq) 0.63 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) — —
Marinobacter adhaerens HP15 0.65 HP15_1292 methionyl-tRNA synthetase 0.68 HP15_1792 B12-dependent methionine synthase — —
Dickeya dianthicola ME23 0.64 DZA65_RS07050 methionine--tRNA ligase 0.64 DZA65_RS20250 methionine synthase — —
Shewanella oneidensis MR-1 0.64 SO2619 metG methionyl-tRNA synthetase (NCBI ptt file) 0.62 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_05265 methionine--tRNA ligase 0.64 CSW01_02060 methionine synthase low > 62
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2379 methionyl-tRNA synthetase (EC 6.1.1.10) 0.64 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) — —
Acinetobacter baumannii LAC-4 0.60 RR41_RS15370 methionine--tRNA ligase 0.66 RR41_RS08790 methionine synthase low > 55
Methylophilus sp. DMC18 0.60 GFF1079 Methionine--tRNA ligase 0.58 GFF2281 Methionine synthase low > 43
Acinetobacter radioresistens SK82 0.59 MPMX26_02526 Methionine--tRNA ligase 0.67 MPMX26_02351 Methionine synthase low > 36
Dechlorosoma suillum PS 0.56 Dsui_1248 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase 0.62 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS15470 methionyl-tRNA synthetase 0.60 HSERO_RS21740 methionine synthase — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS08930 methionine--tRNA ligase 0.58 ABCV34_RS14560 methionine synthase — —
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS07310 methionine--tRNA ligase 0.49 HMPREF1078_RS14955 methionine synthase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS19810 methionine--tRNA ligase 0.59 ABZR88_RS20930 methionine synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS20270 methionine--tRNA ligase 0.60 CA265_RS23440 methionine synthase 0.59 15
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_00570 methionine--tRNA ligase 0.59 CA264_16785 methionine synthase low > 74
Fusobacterium nucleatum SB010 0.15 HUW76_03910 methionine--tRNA ligase 0.28 HUW76_02290 homocysteine S-methyltransferase family protein — —

Not shown: 36 genomes with orthologs for Psyr_3886 only; 11 genomes with orthologs for Psyr_2464 only