Conservation of cofitness between Psyr_0188 and Psyr_0574 in Pseudomonas syringae pv. syringae B728a

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0188 Protein of unknown function UPF0047 1.0 Psyr_0574 protease FtsH subunit HflK 0.58 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0188 Protein of unknown function UPF0047 1.00 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas sp. DMC3 0.86 GFF373 hypothetical protein 0.75 GFF3222 Modulator of FtsH protease HflK low > 89
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2168 FIG004064: hypothetical protein 0.78 Pf1N1B4_1410 HflK protein — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_839 FIG004064: hypothetical protein 0.75 PfGW456L13_152 HflK protein low > 87
Pseudomonas fluorescens SBW25 0.85 PFLU_RS29295 YjbQ family protein 0.78 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS29295 YjbQ family protein 0.78 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_12710 hypothetical protein 0.77 AO356_08645 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_4413 FIG004064: hypothetical protein 0.75 Pf6N2E2_3612 HflK protein low > 103
Pseudomonas simiae WCS417 0.84 PS417_27610 hypothetical protein 0.76 PS417_02500 membrane protein — —
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_09065 hypothetical protein 0.78 AO353_13155 hypothetical protein low > 101
Pseudomonas lactucae CFBP13502 0.84 GEMAOFIL_05660 hypothetical protein 0.75 GEMAOFIL_00738 Modulator of FtsH protease HflK — —
Pseudomonas sp. RS175 0.84 PFR28_04381 hypothetical protein 0.77 PFR28_05123 Modulator of FtsH protease HflK low > 88
Pseudomonas stutzeri RCH2 0.82 Psest_3770 secondary thiamine-phosphate synthase enzyme 0.67 Psest_0685 HflK protein — —
Pseudomonas sp. S08-1 0.80 OH686_13770 UPF0047 protein YjbQ 0.66 OH686_09460 HflK protein low > 80
Pseudomonas aeruginosa PA14 0.78 IKLFDK_27020 Uncharacterised protein family UPF0047 0.68 IKLFDK_28830 FtsH protease activity modulator HflK — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_01960 hypothetical protein 0.33 CSW01_01845 protease modulator HflK low > 62
Shewanella amazonensis SB2B 0.66 Sama_1665 hypothetical protein (RefSeq) 0.34 Sama_3023 hflK protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.64 HP15_721 protein belonging to uncharacterized protein family UPF0047 0.42 HP15_2497 HflK low > 73
Pantoea sp. MT58 0.64 IAI47_17830 YjbQ family protein 0.32 IAI47_02600 FtsH protease activity modulator HflK low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS21155 YjbQ family protein 0.32 PagCFBP13505_RS11195 FtsH protease activity modulator HflK low > 74
Pectobacterium carotovorum WPP14 0.62 HER17_RS03555 secondary thiamine-phosphate synthase enzyme YjbQ 0.32 HER17_RS02595 FtsH protease activity modulator HflK low > 75
Enterobacter sp. TBS_079 0.61 MPMX20_00274 hypothetical protein 0.32 MPMX20_00455 Modulator of FtsH protease HflK low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_4248 secondary thiamine-phosphate synthase enzyme 0.33 EX28DRAFT_3371 HflK protein low > 76
Escherichia coli BL21 0.61 ECD_03928 thiamine phosphate synthase 0.32 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor low > 61
Escherichia coli BW25113 0.61 b4056 yjbQ hypothetical protein (NCBI) 0.32 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli ECRC102 0.61 NIAGMN_10750 yjbQ UPF0047 protein YjbQ 0.32 NIAGMN_10095 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECOR27 0.61 NOLOHH_05155 yjbQ UPF0047 protein YjbQ 0.32 NOLOHH_04510 hflK FtsH protease activity modulator HflK low > 76
Escherichia coli ECRC99 0.61 KEDOAH_15245 yjbQ UPF0047 protein YjbQ 0.32 KEDOAH_15910 hflK FtsH protease activity modulator HflK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03985 hypothetical protein 0.32 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 74
Escherichia coli ECOR38 0.61 HEPCGN_11520 yjbQ UPF0047 protein YjbQ 0.32 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 88
Escherichia coli ECRC98 0.61 JDDGAC_16540 yjbQ UPF0047 protein YjbQ 0.32 JDDGAC_15885 hflK FtsH protease activity modulator HflK low > 87
Escherichia coli ECRC100 0.61 OKFHMN_12905 yjbQ UPF0047 protein YjbQ 0.32 OKFHMN_12245 hflK FtsH protease activity modulator HflK low > 79
Escherichia coli ECRC101 0.61 MCAODC_03415 yjbQ UPF0047 protein YjbQ 0.32 MCAODC_02760 hflK FtsH protease activity modulator HflK low > 88
Escherichia fergusonii Becca 0.60 EFB2_04535 hypothetical protein 0.33 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli ECRC62 0.60 BNILDI_06370 yjbQ UPF0047 protein YjbQ 0.32 BNILDI_06980 hflK FtsH protease activity modulator HflK low > 75
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23475 secondary thiamine-phosphate synthase enzyme YjbQ 0.32 ECOLIN_RS24240 FtsH protease activity modulator HflK low > 55
Klebsiella pneumoniae MKP103 0.60 KDGMDA_10390 Thiamin phosphate synthase 0.33 KDGMDA_11045 FtsH protease activity modulator HflK low > 95
Shewanella loihica PV-4 0.59 Shew_1893 hypothetical protein (RefSeq) 0.33 Shew_0568 HflK protein (RefSeq) low > 60
Erwinia amylovora T8 0.59 OLJFJH_03445 Uncharacterised protein family UPF0047 0.31 OLJFJH_02490 FtsH protease activity modulator HflK low > 58
Klebsiella michiganensis M5al 0.58 BWI76_RS01935 thiamin phosphate synthase 0.32 BWI76_RS02545 protease modulator HflK low > 92
Dickeya dadantii 3937 0.56 DDA3937_RS17595 YjbQ family protein 0.34 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF1425 FIG004064: hypothetical protein 0.33 GFF827 HflK protein low > 78
Serratia liquefaciens MT49 0.53 IAI46_22925 YjbQ family protein 0.32 IAI46_01635 FtsH protease activity modulator HflK low > 86
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS10440 secondary thiamine-phosphate synthase enzyme YjbQ 0.29 ABZR86_RS08355 FtsH protease activity modulator HflK low > 74
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS26250 hypothetical protein 0.28 BPHYT_RS12545 membrane protein — —
Paraburkholderia graminis OAS925 0.43 ABIE53_005988 secondary thiamine-phosphate synthase enzyme 0.29 ABIE53_002735 membrane protease subunit HflK low > 113
Dechlorosoma suillum PS 0.43 Dsui_0738 secondary thiamine-phosphate synthase enzyme 0.33 Dsui_3135 HflK protein — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02804 secondary thiamine-phosphate synthase enzyme 0.29 H281DRAFT_00523 protease FtsH subunit HflK low > 103
Phaeobacter inhibens DSM 17395 0.41 PGA1_c08850 secondary thiamine-phosphate synthase enzyme 0.26 PGA1_c23710 putative protein HflK low > 62
Methylophilus sp. DMC18 0.41 GFF1790 hypothetical protein 0.33 GFF1223 hypothetical protein low > 43
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_11150 yjbQ secondary thiamine-phosphate synthase 0.29 OKGIIK_06640 hflK FtsH protease activity modulator HflK low > 53
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS04275 secondary thiamine-phosphate synthase enzyme YjbQ 0.28 LRK54_RS00620 FtsH protease activity modulator HflK 0.57 7
Bosea sp. OAE506 0.40 ABIE41_RS12025 secondary thiamine-phosphate synthase enzyme YjbQ 0.24 ABIE41_RS12850 FtsH protease activity modulator HflK low > 77
Rhodanobacter denitrificans MT42 0.40 LRK55_RS04050 secondary thiamine-phosphate synthase enzyme YjbQ 0.28 LRK55_RS00390 FtsH protease activity modulator HflK low > 63
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS05655 secondary thiamine-phosphate synthase enzyme YjbQ 0.28 LRK53_RS09535 FtsH protease activity modulator HflK low > 59
Rhizobium sp. OAE497 0.40 ABIE40_RS12650 secondary thiamine-phosphate synthase enzyme YjbQ 0.25 ABIE40_RS11535 FtsH protease activity modulator HflK low > 107
Sinorhizobium meliloti 1021 0.39 SMc01559 hypothetical protein 0.27 SMc01441 membrane bound protease low > 103
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_2014 secondary thiamine-phosphate synthase enzyme 0.30 B158DRAFT_1954 protease FtsH subunit HflK low > 40
Agrobacterium fabrum C58 0.37 Atu2164 hypothetical protein 0.25 Atu2045 HFLK protein low > 89

Not shown: 15 genomes with orthologs for Psyr_0188 only; 33 genomes with orthologs for Psyr_0574 only