Conservation of cofitness between Psyr_2457 and Psyr_0017 in Pseudomonas syringae pv. syringae B728a

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2457 Aminoglycoside phosphotransferase 1.0 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.32 16
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2457 Aminoglycoside phosphotransferase 1.00 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_21500 aminoglycoside phosphotransferase 0.80 AO353_10630 16S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_4528 Predicted aminoglycoside phosphotransferase 0.80 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas simiae WCS417 0.88 PS417_15025 aminoglycoside phosphotransferase 0.80 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas sp. DMC3 0.88 GFF1692 hypothetical protein 0.79 GFF590 Ribosomal RNA small subunit methyltransferase B low > 89
Pseudomonas orientalis W4I3 0.87 QF045_RS14950 phosphotransferase family protein 0.80 QF045_RS03020 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 93
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_545 Predicted aminoglycoside phosphotransferase 0.81 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens SBW25 0.87 PFLU_RS17040 phosphotransferase family protein 0.81 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_3498 Predicted aminoglycoside phosphotransferase 0.78 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS17040 phosphotransferase family protein 0.81 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_23330 aminoglycoside phosphotransferase 0.80 AO356_11275 16S rRNA methyltransferase low > 104
Pseudomonas sp. RS175 0.86 PFR28_02396 hypothetical protein 0.79 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas lactucae CFBP13502 0.85 GEMAOFIL_03307 hypothetical protein 0.80 GEMAOFIL_00223 Ribosomal RNA small subunit methyltransferase B 0.53 86
Pseudomonas sp. SVBP6 0.84 COO64_RS24860 phosphotransferase family protein 0.79 COO64_RS02215 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 93
Pseudomonas sp. S08-1 0.83 OH686_03510 acyl-CoA dehydrogenase, putative phosphotransferase 0.70 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Pseudomonas segetis P6 0.83 MPMX49_02795 hypothetical protein 0.77 MPMX49_00273 Ribosomal RNA small subunit methyltransferase B low > 75
Pseudomonas sp. BP01 0.82 JOY50_RS03965 phosphotransferase family protein 0.80 JOY50_RS08250 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 84
Pseudomonas putida KT2440 0.81 PP_3925 conserved protein of unknown function 0.80 PP_0066 Ribosomal RNA small subunit methyltransferase B low > 96
Pseudomonas aeruginosa PUPa3 0.81 DQ20_RS54955 phosphotransferase family protein 0.72 DQ20_RS58690 rsmB;go_function=RNA 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 101
Pseudomonas aeruginosa MRSN321 0.81 DY961_RS20875 phosphotransferase family protein 0.72 DY961_RS26285 rsmB;go_function=RNA 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 100
Pseudomonas aeruginosa PA14 0.80 IKLFDK_08895 phosphotransferase family protein 0.71 IKLFDK_25475 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 98
Pseudomonas stutzeri RCH2 0.80 Psest_2082 Predicted aminoglycoside phosphotransferase 0.79 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB low > 67
Marinobacter adhaerens HP15 0.60 HP15_823 phosphotransferase enzyme family protein 0.42 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase low > 73
Acinetobacter radioresistens SK82 0.50 MPMX26_01462 hypothetical protein 0.35 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B — —
Alteromonas macleodii MIT1002 0.49 MIT1002_02747 thiamine kinase 0.36 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.85 10
Acinetobacter baumannii LAC-4 0.49 RR41_RS13710 phosphotransferase family protein 0.38 RR41_RS00120 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 55
Xanthobacter sp. DMC5 0.28 GFF2838 hypothetical protein 0.22 GFF3851 Ribosomal RNA small subunit methyltransferase B — —
Shewanella loihica PV-4 0.27 Shew_2861 aminoglycoside phosphotransferase (RefSeq) 0.40 Shew_3738 sun protein (RefSeq) low > 60
Variovorax sp. OAS795 0.27 ABID97_RS11575 phosphotransferase 0.24 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 91
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_0845 Predicted aminoglycoside phosphotransferase 0.16 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases low > 68
Caulobacter crescentus NA1000 0.26 CCNA_00301 phosphotransferase family protein 0.21 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00301 phosphotransferase family protein 0.21 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 67
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS14670 phosphotransferase 0.31 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS13265 phosphotransferase family protein 0.17 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase low > 48
Ralstonia solanacearum GMI1000 0.25 RS_RS10130 phosphotransferase family protein 0.29 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS14560 phosphotransferase family protein 0.31 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 81
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS06745 aminoglycoside phosphotransferase 0.29 BPHYT_RS01475 16S rRNA methyltransferase low > 109
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS24035 phosphotransferase 0.29 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 153
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS05745 aminoglycoside phosphotransferase 0.26 RR42_RS20450 16S rRNA methyltransferase low > 128
Rhodopseudomonas palustris CGA009 0.25 TX73_017000 phosphotransferase family protein 0.19 TX73_000155 transcription antitermination factor NusB low > 86
Paraburkholderia graminis OAS925 0.25 ABIE53_001615 aminoglycoside phosphotransferase (APT) family kinase protein 0.29 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04592 Predicted kinase, aminoglycoside phosphotransferase (APT) family 0.29 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase low > 103
Ralstonia solanacearum UW163 0.23 UW163_RS10970 phosphotransferase family protein 0.30 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS02755 phosphotransferase family protein 0.30 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4494 Predicted aminoglycoside phosphotransferase 0.28 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 90
Mycobacterium tuberculosis H37Rv 0.22 Rv3761c Possible acyl-CoA dehydrogenase FadE36 0.14 Rv1407 Probable Fmu protein (sun protein) low > 58
Acidovorax sp. GW101-3H11 0.22 Ac3H11_1052 Predicted aminoglycoside phosphotransferase 0.25 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) — —
Rhodanobacter sp000427505 FW510-R12 0.22 LRK53_RS10705 phosphotransferase 0.33 LRK53_RS02905 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 59
Sphingobium sp. HT1-2 0.21 GFF4883 acyl-CoA dehydrogenase, putative phosphotransferase 0.18 GFF3272 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) low > 95
Dinoroseobacter shibae DFL-12 0.21 Dshi_1003 aminoglycoside phosphotransferase (RefSeq) 0.18 Dshi_3033 Fmu (Sun) domain protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.20 PGA1_c15630 putative aminoglycoside phosphotransferase 0.19 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B low > 62

Not shown: 2 genomes with orthologs for Psyr_2457 only; 54 genomes with orthologs for Psyr_0017 only