Conservation of cofitness between PfGW456L13_4874 and PfGW456L13_2927 in Pseudomonas fluorescens GW456-L13

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_4874 Iron-sulfur cluster regulator IscR 1.0 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.29 14
Pseudomonas fluorescens FW300-N1B4 1.00 Pf1N1B4_866 Iron-sulfur cluster regulator IscR 0.98 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_06650 transcriptional regulator 0.95 AO356_22805 alkyl hydroperoxide reductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_15830 transcriptional regulator 0.95 AO353_26965 alkyl hydroperoxide reductase low > 101
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.95 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas simiae WCS417 0.97 PS417_23205 transcriptional regulator 0.95 PS417_14045 alkyl hydroperoxide reductase low > 88
Pseudomonas fluorescens SBW25 0.97 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.95 PFLU_RS14570 peroxiredoxin low > 109
Pseudomonas sp. RS175 0.97 PFR28_00285 HTH-type transcriptional regulator IscR 0.95 PFR28_02482 Alkyl hydroperoxide reductase C low > 88
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_3190 Iron-sulfur cluster regulator IscR 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 103
Pseudomonas sp. S08-1 0.93 OH686_17470 iron-sulfur cluster assembly transcription factor IscR 0.70 OH686_18680 peroxiredoxin low > 80
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.95 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.95 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas stutzeri RCH2 0.86 Psest_1250 iron-sulfur cluster assembly transcription factor IscR 0.71 Psest_1133 peroxiredoxin
Pseudomonas putida KT2440 0.86 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.88 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit low > 96
Shewanella loihica PV-4 0.59 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.75 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq)
Pantoea sp. MT58 0.59 IAI47_05000 Fe-S cluster assembly transcriptional regulator IscR 0.76 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.64 11
Marinobacter adhaerens HP15 0.59 HP15_1487 transcriptional regulator, BadM/Rrf2 family 0.71 HP15_3622 peroxiredoxin low > 73
Alteromonas macleodii MIT1002 0.59 MIT1002_02802 HTH-type transcriptional regulator IscR 0.71 MIT1002_01784 Alkyl hydroperoxide reductase subunit C low > 70
Shewanella amazonensis SB2B 0.59 Sama_1292 Rrf2 family protein (RefSeq) 0.73 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1458 transcriptional regulator, BadM/Rrf2 family 0.74 B158DRAFT_0278 peroxiredoxin low > 40
Pectobacterium carotovorum WPP14 0.58 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 0.75 HER17_RS02545 alkyl hydroperoxide reductase subunit C low > 75
Shewanella oneidensis MR-1 0.58 SO2263 Rrf2 family protein (NCBI ptt file) 0.73 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.58 DDA3937_RS15550 Fe-S cluster assembly transcriptional regulator IscR 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C
Shewanella sp. ANA-3 0.58 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.73 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) low > 73
Dickeya dianthicola 67-19 0.57 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.74 HGI48_RS02460 alkyl hydroperoxide reductase subunit C
Dickeya dianthicola ME23 0.57 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.74 DZA65_RS02565 alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli ECRC98 0.50 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2436 Iron-sulfur cluster regulator IscR 0.75 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 78
Escherichia coli ECOR38 0.50 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia fergusonii Becca 0.50 EFB2_01359 HTH-type transcriptional regulator IscR 0.74 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli ECRC100 0.50 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.74 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 73
Escherichia coli ECRC99 0.50 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C
Enterobacter sp. TBS_079 0.50 MPMX20_03412 HTH-type transcriptional regulator IscR 0.75 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Escherichia coli ECRC62 0.50 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C low > 75
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.75 EX28DRAFT_2350 peroxiredoxin low > 76
Escherichia coli BL21 0.50 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.74 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 61
Escherichia coli Nissle 1917 0.50 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.74 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C low > 55
Escherichia coli ECRC101 0.50 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C 0.61 26
Escherichia coli BW25113 0.50 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.74 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli ECRC102 0.50 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.74 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C
Klebsiella michiganensis M5al 0.49 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Acinetobacter radioresistens SK82 0.49 MPMX26_01328 HTH-type transcriptional regulator IscR 0.79 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00477 transcriptional regulator, BadM/Rrf2 family 0.78 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C)
Paraburkholderia graminis OAS925 0.47 ABIE53_002782 Rrf2 family iron-sulfur cluster assembly transcriptional regulator 0.78 ABIE53_005904 peroxiredoxin low > 113
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS12785 Rrf2 family transcriptional regulator 0.79 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS05780 Fe-S cluster assembly transcriptional regulator IscR 0.78 QEN71_RS13380 alkyl hydroperoxide reductase subunit C low > 153
Castellaniella sp019104865 MT123 0.45 ABCV34_RS05100 Fe-S cluster assembly transcriptional regulator IscR 0.78 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS15775 DNA-binding protein 0.79 HSERO_RS21540 alkyl hydroperoxide reductase subunit C
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4961 Iron-sulfur cluster regulator IscR 0.67 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Acidovorax sp. GW101-3H11 0.45 Ac3H11_4113 Iron-sulfur cluster regulator IscR 0.64 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS09975 Fe-S cluster assembly transcriptional regulator IscR 0.67 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Rhodospirillum rubrum S1H 0.41 Rru_A2028 Transcriptional Regulator, BadM/Rrf2 family (NCBI) 0.83 Rru_A1418 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI)
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS04565 Rrf2 family transcriptional regulator 0.74 A4249_RS04540 alkyl hydroperoxide reductase subunit C low > 48
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS09485 SUF system Fe-S cluster assembly regulator 0.82 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74

Not shown: 9 genomes with orthologs for PfGW456L13_4874 only; 26 genomes with orthologs for PfGW456L13_2927 only