Conservation of cofitness between PfGW456L13_2593 and PfGW456L13_2633 in Pseudomonas fluorescens GW456-L13

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_2593 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 1.0 PfGW456L13_2633 Isocitrate lyase (EC 4.1.3.1) 0.41 3
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_3988 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.99 Pf1N1B4_4042 Isocitrate lyase (EC 4.1.3.1) (from data) 0.30 15
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_20355 AMP-binding protein 0.99 AO353_27735 isocitrate lyase low > 101
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_01575 AMP-binding protein 0.99 AO356_22080 isocitrate lyase low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_2190 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.98 Pf6N2E2_279 Isocitrate lyase (EC 4.1.3.1) low > 103
Pseudomonas sp. RS175 0.87 PFR28_01261 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase 0.98 PFR28_02625 Isocitrate lyase low > 88
Pseudomonas simiae WCS417 0.82 PS417_17010 AMP-binding protein 0.99 PS417_16570 isocitrate lyase low > 88
Pseudomonas fluorescens SBW25 0.81 PFLU_RS18960 AMP-binding protein 0.99 PFLU_RS18610 isocitrate lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS18960 AMP-binding protein 0.99 PFLU_RS18610 isocitrate lyase low > 109
Pseudomonas putida KT2440 0.78 PP_4063 putative Long-chain-fatty-acid-CoA ligase 0.97 PP_4116 isocitrate lyase 0.29 19
Pseudomonas stutzeri RCH2 0.72 Psest_1086 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.15 Psest_2014 Isocitrate lyase (EC 4.1.3.1) (from data) low > 67
Marinobacter adhaerens HP15 0.61 HP15_999 acyl-CoA synthase 0.14 HP15_3234 isocitrate lyase low > 73
Azospirillum sp. SherDot2 0.56 MPMX19_03344 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase 0.58 MPMX19_05830 Isocitrate lyase low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4967 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.71 GFF4147 Isocitrate lyase (EC 4.1.3.1) low > 90
Rhodanobacter denitrificans MT42 0.55 LRK55_RS08165 AMP-binding protein 0.68 LRK55_RS10225 isocitrate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS08400 AMP-binding protein 0.68 LRK54_RS10585 isocitrate lyase low > 59
Paraburkholderia graminis OAS925 0.54 ABIE53_000249 fatty-acyl-CoA synthase 0.73 ABIE53_002536 isocitrate lyase 0.27 10
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_02398 fatty-acyl-CoA synthase 0.72 H281DRAFT_00580 isocitrate lyase low > 103
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS07325 AMP-binding protein 0.68 ABZR87_RS11590 isocitrate lyase low > 80
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_15170 AMP-binding protein 0.68 OKGIIK_13320 aceA isocitrate lyase low > 52
Variovorax sp. OAS795 0.54 ABID97_RS25135 AMP-binding protein 0.76 ABID97_RS11115 isocitrate lyase low > 91
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS11360 AMP-binding protein 0.69 RALBFv3_RS00150 isocitrate lyase low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS02225 AMP-binding protein 0.69 UW163_RS13480 isocitrate lyase — —
Ralstonia solanacearum PSI07 0.53 RPSI07_RS21845 AMP-binding protein 0.69 RPSI07_RS17335 isocitrate lyase low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS02190 AMP-binding protein 0.69 RS_RS06810 isocitrate lyase low > 80
Variovorax sp. SCN45 0.53 GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) 0.71 GFF4829 Isocitrate lyase (EC 4.1.3.1) low > 127
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS19375 AMP-binding protein 0.72 BPHYT_RS12285 isocitrate lyase low > 109
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3009 Acetoacetate--CoA ligase (EC 6.2.1.16) (from data) 0.71 Ac3H11_2831 Isocitrate lyase (EC 4.1.3.1) (from data) 0.40 32
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS26915 AMP-binding protein 0.69 RR42_RS12200 isocitrate lyase low > 128
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS29275 AMP-binding protein 0.70 QEN71_RS06270 isocitrate lyase low > 153
Shewanella loihica PV-4 0.51 Shew_2593 acyl-CoA synthetase (RefSeq) 0.78 Shew_1276 Isocitrate lyase (EC 4.1.3.1) (from data) low > 60
Pontibacter actiniarum KMM 6156, DSM 19842 0.51 CA264_07945 AMP-binding protein 0.60 CA264_09255 isocitrate lyase low > 74
Shewanella amazonensis SB2B 0.51 Sama_1904 AMP-binding domain protein (RefSeq) 0.79 Sama_2380 Isocitrate lyase (EC 4.1.3.1) (from data) low > 62
Shewanella sp. ANA-3 0.51 Shewana3_2475 AMP-binding domain protein (RefSeq) 0.78 Shewana3_2942 isocitrate lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO1971 AMP-binding family protein (NCBI ptt file) 0.77 SO1484 aceA Isocitrate lyase (EC 4.1.3.1) (from data) low > 76
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_0771 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.15 Ga0059261_1963 Isocitrate lyase low > 68
Mycobacterium tuberculosis H37Rv 0.47 Rv2505c Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) 0.61 Rv0467 Isocitrate lyase Icl (isocitrase) (isocitratase) — —
Rhodopseudomonas palustris CGA009 0.28 TX73_002405 AMP-binding protein 0.15 TX73_022775 isocitrate lyase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3540 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.72 GFF1352 Isocitrate lyase (EC 4.1.3.1) low > 78
Caulobacter crescentus NA1000 0.20 CCNA_01382 long-chain-fatty-acid--CoA ligase 0.17 CCNA_01841 isocitrate lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_01382 long-chain-fatty-acid--CoA ligase 0.17 CCNA_01841 isocitrate lyase low > 67

Not shown: 14 genomes with orthologs for PfGW456L13_2593 only; 38 genomes with orthologs for PfGW456L13_2633 only