| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_2700 | | Cysteine synthase (EC 2.5.1.47) | 1.0 | Pf6N2E2_4755 | | YihE protein, required for LPS synthesis | 0.28 | 17 |
| Pseudomonas fluorescens FW300-N2C3 | 0.99 | AO356_04305 | | cysteine synthase | 0.99 | AO356_14115 | | serine/threonine protein kinase | low | > 104 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00734 | | Cysteine synthase A | 0.97 | PFR28_04107 | | Serine/threonine protein kinase RdoA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_18020 | | cysteine synthase | 0.94 | AO353_07545 | | serine/threonine protein kinase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.91 | GFF2334 | | Cysteine synthase A | 0.94 | GFF80 | | Stress response kinase A | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.90 | GEMAOFIL_01633 | | Cysteine synthase A | 0.95 | GEMAOFIL_05326 | | Serine/threonine protein kinase RdoA | low | > 93 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_07505 | | cysteine synthase | 0.95 | PS417_26025 | | serine/threonine protein kinase | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_3374 | | Cysteine synthase (EC 2.5.1.47) | 0.94 | Pf1N1B4_2481 | | YihE protein, required for LPS synthesis | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS07585 | | cysteine synthase A | 0.95 | PFLU_RS27670 | | serine/threonine protein kinase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS07585 | | cysteine synthase A | 0.95 | PFLU_RS27670 | | serine/threonine protein kinase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.89 | PfGW456L13_4472 | | Cysteine synthase (EC 2.5.1.47) | 0.93 | PfGW456L13_1143 | | YihE protein, required for LPS synthesis | low | > 87 |
| Pseudomonas sp. S08-1 | 0.87 | OH686_05215 | | cysteine synthase A | 0.82 | OH686_10380 | | YihE protein, required for LPS synthesis | low | > 80 |
| Pseudomonas sp. BP01 | 0.87 | JOY50_RS01420 | cysK | cysteine synthase A | 0.84 | JOY50_RS17915 | | serine/threonine protein kinase | low | > 84 |
| Pseudomonas putida KT2440 | 0.86 | PP_4571 | | cysteine synthase A | 0.83 | PP_0359 | | serine/threonine protein kinase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.86 | COO64_RS22165 | cysK | cysteine synthase A | 0.89 | COO64_RS22745 | | serine/threonine protein kinase | low | > 93 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.86 | Psyr_1583 | | cysteine synthase | 0.87 | Psyr_4697 | | Aminoglycoside phosphotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.86 | Psyr_1583 | | cysteine synthase | 0.87 | Psyr_4697 | | Aminoglycoside phosphotransferase | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.84 | IKLFDK_13610 | | cysteine synthase A | 0.82 | IKLFDK_22995 | | serine/threonine protein kinase | low | > 100 |
| Pseudomonas stutzeri RCH2 | 0.79 | Psest_1855 | | cysteine synthase A | 0.84 | Psest_0409 | | Putative homoserine kinase type II (protein kinase fold) | low | > 67 |
| Marinobacter adhaerens HP15 | 0.71 | HP15_3453 | | cysteine synthase A | 0.52 | HP15_2490 | | kinase | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.69 | CSW01_04945 | | cysteine synthase A | 0.49 | CSW01_00175 | | serine/threonine protein kinase | low | > 62 |
| Dickeya dadantii 3937 | 0.68 | DDA3937_RS04490 | | cysteine synthase A | 0.46 | DDA3937_RS00095 | | serine/threonine protein kinase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS17170 | | cysteine synthase A | 0.43 | HER17_RS21480 | | serine/threonine protein kinase | low | > 75 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_18445 | | cysteine synthase A | 0.46 | IAI46_25000 | | serine/threonine protein kinase | low | > 86 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS04370 | | cysteine synthase A | 0.45 | DZA65_RS22245 | | serine/threonine protein kinase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS04450 | | cysteine synthase A | 0.45 | HGI48_RS21270 | | serine/threonine protein kinase | low | > 71 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_12745 | cysK | cysteine synthase A | 0.43 | BNILDI_05225 | srkA | stress response kinase SrkA | low | > 75 |
| Enterobacter sp. TBS_079 | 0.67 | MPMX20_03308 | | Cysteine synthase A | 0.43 | MPMX20_04604 | | Stress response kinase A | low | > 85 |
| Escherichia fergusonii Becca | 0.66 | EFB2_01462 | | Cysteine synthase A | 0.43 | EFB2_04758 | | Stress response kinase A | low | > 86 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_06020 | cysK | cysteine synthase A | 0.43 | KEDOAH_13975 | srkA | stress response kinase SrkA | — | — |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_19970 | cysK | cysteine synthase A | 0.43 | NIAGMN_11930 | srkA | stress response kinase SrkA | low | > 80 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_13880 | cysK | cysteine synthase A | 0.43 | NOLOHH_06305 | srkA | stress response kinase SrkA | low | > 76 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_26150 | cysK | cysteine synthase A | 0.43 | JDDGAC_17800 | srkA | stress response kinase SrkA | low | > 87 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_0214 | | cysteine synthase A | 0.42 | EX28DRAFT_4340 | | Putative homoserine kinase type II (protein kinase fold) | low | > 76 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_12730 | cysK | cysteine synthase A | 0.43 | MCAODC_04675 | srkA | stress response kinase SrkA | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_01309 | | Cysteine synthase A | 0.43 | OHPLBJKB_04194 | | Stress response kinase A | low | > 74 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS13870 | | cysteine synthase A | 0.43 | ECOLIN_RS22245 | | stress response kinase SrkA | low | > 55 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_22200 | cysK | cysteine synthase A | 0.43 | OKFHMN_14175 | srkA | stress response kinase SrkA | low | > 79 |
| Escherichia coli BL21 | 0.66 | ECD_02314 | | cysteine synthase A, O-acetylserine sulfhydrolase A subunit | 0.43 | ECD_03745 | | Cpx stress response Thr/Ser protein kinase; MazF antagonist protein | low | > 61 |
| Escherichia coli BW25113 | 0.66 | b2414 | cysK | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | 0.43 | b3859 | yihE | predicted kinase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_21380 | cysK | cysteine synthase A | 0.43 | HEPCGN_12810 | srkA | stress response kinase SrkA | low | > 88 |
| Pantoea sp. MT58 | 0.66 | IAI47_05440 | | cysteine synthase A | 0.44 | IAI47_00420 | | serine/threonine protein kinase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF2044 | | Cysteine synthase (EC 2.5.1.47) | 0.43 | GFF2212 | | YihE protein, a ser/thr kinase implicated in LPS synthesis and Cpx signalling | low | > 78 |
| Klebsiella pneumoniae MKP103 | 0.66 | KDGMDA_27485 | | cysteine synthase A | 0.44 | KDGMDA_08955 | | serine/threonine protein kinase | low | > 95 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS20640 | | cysteine synthase A | 0.43 | BWI76_RS00340 | | stress response kinase A | low | > 92 |
| Pantoea agglomerans CFBP13505 P0401 | 0.65 | PagCFBP13505_RS19985 | | cysteine synthase A | 0.45 | PagCFBP13505_RS18935 | | serine/threonine protein kinase | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.65 | IJEDHG_17655 | cysK | cysteine synthase A | 0.39 | IJEDHG_10980 | | serine/threonine protein kinase | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.65 | LU632_RS06625 | cysK | cysteine synthase A | 0.39 | LU632_RS23880 | | serine/threonine protein kinase | low | > 74 |
| Rahnella sp. WP5 | 0.65 | EX31_RS20175 | | cysteine synthase A | 0.46 | EX31_RS15915 | | serine/threonine protein kinase | low | > 89 |
| Erwinia amylovora T8 | 0.65 | OLJFJH_10865 | | cysteine synthase A | 0.42 | OLJFJH_05460 | | serine/threonine protein kinase | 0.34 | 55 |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_1561 | | cysteine synthase (RefSeq) | 0.50 | Shewana3_3839 | | serine/threonine protein kinase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.64 | SO2903 | cysK | cysteine synthase A (NCBI ptt file) | 0.50 | SO0332 | | hypothetical kinase (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_02237 | | Cysteine synthase A | 0.51 | MIT1002_00718 | | serine/threonine protein kinase | — | — |
| Shewanella loihica PV-4 | 0.62 | Shew_2382 | | cysteine synthase A (RefSeq) | 0.52 | Shew_0264 | | serine/threonine protein kinase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.61 | Sama_1508 | | cysteine synthase A (RefSeq) | 0.48 | Sama_3322 | | serine/threonine protein kinase (RefSeq) | low | > 62 |
| Dechlorosoma suillum PS | 0.59 | Dsui_2521 | | cysteine synthase A | 0.53 | Dsui_2766 | | putative homoserine kinase type II (protein kinase fold) | low | > 51 |
| Variovorax sp. SCN45 | 0.41 | GFF4549 | | Cysteine synthase (EC 2.5.1.47) | 0.50 | GFF3567 | | YihE protein, required for LPS synthesis | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF4578 | | Cysteine synthase (EC 2.5.1.47) | 0.46 | GFF355 | | YihE protein, required for LPS synthesis | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_1975 | | Cysteine synthase (EC 2.5.1.47) | 0.51 | Ac3H11_4649 | | YihE protein, required for LPS synthesis | low | > 79 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS06080 | | cysteine synthase A | 0.48 | ABID97_RS00940 | | serine/threonine protein kinase | low | > 91 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS21960 | | cysteine synthase | 0.52 | RR42_RS02875 | | serine/threonine protein kinase | low | > 128 |
| Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_2456 | | cysteine synthase A | 0.57 | B158DRAFT_1377 | | Putative homoserine kinase type II (protein kinase fold) | low | > 40 |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS05875 | | cysteine synthase A | 0.44 | ABZR86_RS16915 | | serine/threonine protein kinase | low | > 74 |
Not shown: 35 genomes with orthologs for Pf6N2E2_2700 only; 14 genomes with orthologs for Pf6N2E2_4755 only