Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | 1.0 | PP_5149 | | threonine deaminase | 0.38 | 16 |
Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.90 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.51 | 24 |
Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.90 | AO356_10330 | | threonine dehydratase | 0.54 | 4 |
Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.89 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.60 | 1 |
Pseudomonas simiae WCS417 | 0.91 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.88 | PS417_27010 | | threonine dehydratase | 0.57 | 1 |
Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.89 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.59 | 84 |
Pseudomonas sp. RS175 | 0.91 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.89 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.31 | 29 |
Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.88 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.89 | AO353_08485 | | threonine dehydratase | 0.42 | 5 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.87 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.87 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.89 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
Pseudomonas sp. S08-1 | 0.89 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | 0.85 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.86 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.90 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.43 | 19 |
Marinobacter adhaerens HP15 | 0.73 | HP15_1814 | | phospho-2-dehydro-3-heoxyheptonate aldolase | 0.66 | HP15_3213 | | threonine dehydratase biosynthetic | low | > 73 |
Acinetobacter radioresistens SK82 | 0.69 | MPMX26_01673 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.51 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | low | > 36 |
Dechlorosoma suillum PS | 0.62 | Dsui_2381 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.59 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
Shewanella loihica PV-4 | 0.58 | Shew_1067 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.53 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.58 | 34 |
Alteromonas macleodii MIT1002 | 0.58 | MIT1002_01314 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.52 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | low | > 70 |
Shewanella sp. ANA-3 | 0.57 | Shewana3_3013 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.53 | Shewana3_0359 | | threonine dehydratase (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.56 | SO1361 | aroF | phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) | 0.54 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | low | > 76 |
Shewanella amazonensis SB2B | 0.54 | Sama_0893 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.56 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.78 | 12 |
Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_4034 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.58 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.71 | 51 |
Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS07160 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | HSERO_RS19510 | | threonine dehydratase | 0.90 | 13 |
Variovorax sp. SCN45 | 0.48 | GFF4447 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) | 0.58 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.90 | 56 |
Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS02730 | | 3-deoxy-7-phosphoheptulonate synthase | 0.53 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS02485 | | 3-deoxy-7-phosphoheptulonate synthase | 0.53 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | low | > 63 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF581 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.59 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.57 | 62 |
Ralstonia solanacearum UW163 | 0.47 | UW163_RS00610 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
Variovorax sp. OAS795 | 0.47 | ABID97_RS06345 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | 0.67 | 18 |
Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS12955 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_09785 | | 3-deoxy-7-phosphoheptulonate synthase | 0.53 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 52 |
Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS05860 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.56 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS00390 | | 3-deoxy-7-phosphoheptulonate synthase | 0.56 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS12205 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.46 | RS_RS13320 | | 3-deoxy-7-phosphoheptulonate synthase | 0.60 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS11845 | | 3-deoxy-7-phosphoheptulonate synthase | 0.59 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | — | — |
Paraburkholderia graminis OAS925 | 0.46 | ABIE53_003992 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS26560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.57 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.40 | 97 |
Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS23245 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | BPHYT_RS03145 | | threonine dehydratase | — | — |
Castellaniella sp019104865 MT123 | 0.43 | ABCV34_RS06825 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.60 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | — | — |
Not shown: 34 genomes with orthologs for PP_2324 only; 2 genomes with orthologs for PP_5149 only