Conservation of cofitness between PP_2324 and PP_5149 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 1.0 PP_5149 threonine deaminase 0.38 16
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.90 Pf6N2E2_3938 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.51 24
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.90 AO356_10330 threonine dehydratase 0.54 4
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.89 PFLU_RS28665 threonine ammonia-lyase, biosynthetic 0.60 1
Pseudomonas simiae WCS417 0.91 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.88 PS417_27010 threonine dehydratase 0.57 1
Pseudomonas fluorescens SBW25 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.89 PFLU_RS28665 threonine ammonia-lyase, biosynthetic 0.59 84
Pseudomonas sp. RS175 0.91 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.89 PFR28_04834 L-threonine dehydratase biosynthetic IlvA 0.31 29
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.88 Pf1N1B4_2280 Threonine dehydratase biosynthetic (EC 4.3.1.19) low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.89 AO353_08485 threonine dehydratase 0.42 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.87 Psyr_4846 L-threonine ammonia-lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.87 Psyr_4846 L-threonine ammonia-lyase low > 86
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.89 PfGW456L13_949 Threonine dehydratase biosynthetic (EC 4.3.1.19) low > 87
Pseudomonas sp. S08-1 0.89 OH686_01760 3-deoxy-7-phosphoheptulonate synthase 0.85 OH686_11400 threonine ammonia-lyase, biosynthetic low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.90 Psest_3866 threonine ammonia-lyase, biosynthetic, long form 0.43 19
Marinobacter adhaerens HP15 0.73 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.66 HP15_3213 threonine dehydratase biosynthetic low > 73
Acinetobacter radioresistens SK82 0.69 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.51 MPMX26_01278 L-threonine dehydratase biosynthetic IlvA low > 36
Dechlorosoma suillum PS 0.62 Dsui_2381 phospho-2-dehydro-3-deoxyheptonate aldolase 0.59 Dsui_0728 threonine ammonia-lyase, biosynthetic, long form
Shewanella loihica PV-4 0.58 Shew_1067 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.53 Shew_0293 threonine dehydratase (RefSeq) 0.58 34
Alteromonas macleodii MIT1002 0.58 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.52 MIT1002_04040 L-threonine dehydratase biosynthetic IlvA low > 70
Shewanella sp. ANA-3 0.57 Shewana3_3013 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.53 Shewana3_0359 threonine dehydratase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) 0.54 SO4344 ilvA threonine dehydratase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0893 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.56 Sama_3278 threonine dehydratase (RefSeq) 0.78 12
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.58 Ac3H11_2042 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.71 51
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.57 HSERO_RS19510 threonine dehydratase 0.90 13
Variovorax sp. SCN45 0.48 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.58 GFF5246 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.90 56
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.53 LRK54_RS10300 threonine ammonia-lyase, biosynthetic low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.53 LRK55_RS09940 threonine ammonia-lyase, biosynthetic low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.59 GFF1379 Threonine dehydratase biosynthetic (EC 4.3.1.19) 0.57 62
Ralstonia solanacearum UW163 0.47 UW163_RS00610 3-deoxy-7-phosphoheptulonate synthase 0.58 UW163_RS02190 threonine ammonia-lyase, biosynthetic
Variovorax sp. OAS795 0.47 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.58 ABID97_RS07000 threonine ammonia-lyase, biosynthetic 0.67 18
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS12955 3-deoxy-7-phosphoheptulonate synthase 0.58 RALBFv3_RS11395 threonine ammonia-lyase, biosynthetic low > 76
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.53 OKGIIK_13620 ilvA threonine ammonia-lyase, biosynthetic low > 52
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.56 RR42_RS02315 threonine dehydratase low > 128
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.56 ABZR86_RS15925 threonine ammonia-lyase, biosynthetic low > 74
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS12205 3-deoxy-7-phosphoheptulonate synthase 0.58 ABZR87_RS07360 threonine ammonia-lyase, biosynthetic low > 80
Ralstonia solanacearum GMI1000 0.46 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.60 RS_RS02225 threonine ammonia-lyase, biosynthetic
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.59 RPSI07_RS21810 threonine ammonia-lyase, biosynthetic
Paraburkholderia graminis OAS925 0.46 ABIE53_003992 3-deoxy-7-phosphoheptulonate synthase 0.57 ABIE53_002293 threonine dehydratase low > 113
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.57 QEN71_RS01985 threonine ammonia-lyase, biosynthetic 0.40 97
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS23245 phospho-2-dehydro-3-deoxyheptonate aldolase 0.57 BPHYT_RS03145 threonine dehydratase
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.60 ABCV34_RS14460 threonine ammonia-lyase, biosynthetic

Not shown: 34 genomes with orthologs for PP_2324 only; 2 genomes with orthologs for PP_5149 only