Conservation of cofitness between PP_2173 and PP_5104 in Pseudomonas putida KT2440

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2173 Transcriptional regulator, AraC family 1.0 PP_5104 thiazole synthase 0.20 17
Pseudomonas fluorescens SBW25 0.75 PFLU_RS18330 AraC family transcriptional regulator 0.89 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS18330 AraC family transcriptional regulator 0.89 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas simiae WCS417 0.74 PS417_01425 AraC family transcriptional regulator 0.89 PS417_26775 thiazole synthase low > 88
Pseudomonas sp. RS175 0.74 PFR28_02003 HTH-type transcriptional activator RhaR 0.91 PFR28_04252 Thiazole synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_83 transcriptional regulator, AraC family 0.91 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_28535 AraC family transcriptional regulator 0.91 AO353_08215 thiazole synthase low > 101
Dechlorosoma suillum PS 0.49 Dsui_2034 DNA gyrase inhibitor 0.66 Dsui_1014 putative enzyme of thiazole biosynthesis
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS19895 AraC family transcriptional regulator 0.64 HSERO_RS02130 thiazole synthase low > 78
Azospirillum sp. SherDot2 0.47 MPMX19_01363 HTH-type transcriptional activator RhaS 0.43 MPMX19_00262 Thiazole synthase low > 112
Shewanella loihica PV-4 0.47 Shew_0371 AraC family transcriptional regulator (RefSeq) 0.35 Shew_2092 thiazole biosynthesis family protein (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.46 HER17_RS19395 AraC family transcriptional regulator 0.37 HER17_RS20400 thiazole synthase low > 75
Rahnella sp. WP5 0.45 EX31_RS13520 AraC family transcriptional regulator 0.36 EX31_RS16795 thiazole synthase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3136 Uncharacterized protein ygiV 0.35 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Shewanella amazonensis SB2B 0.41 Sama_0076 transcription activator, effector binding (RefSeq) 0.35 Sama_1856 thiG thiazole synthase (RefSeq) low > 62
Ralstonia solanacearum PSI07 0.40 RPSI07_RS23330 AraC family transcriptional regulator 0.35 RPSI07_RS23435 thiazole synthase
Ralstonia solanacearum GMI1000 0.40 RS_RS00650 AraC family transcriptional regulator 0.35 RS_RS00535 thiazole synthase
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS05545 AraC family transcriptional regulator 0.36 ABZR87_RS04800 thiazole synthase
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS10040 AraC family transcriptional regulator 0.35 RALBFv3_RS09925 thiazole synthase
Ralstonia solanacearum UW163 0.39 UW163_RS03540 AraC family transcriptional regulator 0.35 UW163_RS03655 thiazole synthase
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_02611 AraC-family transcriptional regulator 0.56 CCNA_01957 thiazole biosynthesis protein ThiG
Caulobacter crescentus NA1000 0.37 CCNA_02611 AraC-family transcriptional regulator 0.56 CCNA_01957 thiazole biosynthesis protein ThiG
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_23800 AraC family transcriptional regulator 0.91 AO356_13375 thiazole synthase low > 104
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS22525 AraC family transcriptional regulator 0.34 RR42_RS01305 thiazole synthase
Azospirillum brasilense Sp245 0.23 AZOBR_RS00835 transcriptional regulator 0.40 AZOBR_RS30960 thiazole synthase
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_4190 transcriptional regulator, AraC family 0.89 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Variovorax sp. SCN45 0.21 GFF3429 Transcriptional regulator, AraC family 0.34 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Bacteroides ovatus ATCC 8483 0.20 BACOVA_01480 transcriptional regulator, effector binding domain protein 0.35 BACOVA_02359 thiazole biosynthesis protein ThiG low > 94
Bacteroides thetaiotaomicron VPI-5482 0.20 BT1904 transcriptional regulator, AraC-type (NCBI ptt file) 0.34 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) low > 81
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0277 transcriptional regulator, AraC family (TIGR) 0.33 DVU2094 thiG thiG protein (TIGR) low > 55
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS00025 AraC family transcriptional regulator 0.35 QEN71_RS27930 thiazole synthase
Phaeobacter inhibens DSM 17395 0.18 PGA1_c30530 HTH-type transcriptional regulator, AraC family 0.33 PGA1_c09070 thiazole biosynthesis protein ThiG low > 62
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS00095 AraC family transcriptional regulator 0.35 BPHYT_RS17775 thiazole synthase
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.1401.1 hypothetical protein 0.66 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG low > 74
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS07810 AraC family transcriptional regulator 0.34 HMPREF1181_RS14680 thiazole synthase low > 56
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF4832 transcriptional regulator, AraC type; possible DNA gyrase inhibitor 0.32 GFF246 Thiazole biosynthesis protein ThiG
Rhodopseudomonas palustris CGA009 0.15 TX73_004525 AraC family transcriptional regulator 0.33 TX73_018530 thiazole synthase
Bifidobacterium breve UCC2003 0.15 BBR_RS14655 AraC family transcriptional regulator 0.36 BBR_RS13965 thiazole synthase low > 34
Dickeya dadantii 3937 0.14 DDA3937_RS18435 MDR efflux pump AcrAB transcriptional activator RobA 0.35 DDA3937_RS01155 thiazole synthase low > 74
Dickeya dianthicola 67-19 0.14 HGI48_RS18365 MDR efflux pump AcrAB transcriptional activator RobA 0.35 HGI48_RS01150 thiazole synthase low > 71
Dickeya dianthicola ME23 0.14 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA 0.36 DZA65_RS01195 thiazole synthase low > 75
Paraburkholderia bryophila 376MFSha3.1 0.13 H281DRAFT_03691 transcriptional regulator, AraC family 0.35 H281DRAFT_05639 thiazole-phosphate synthase
Serratia liquefaciens MT49 0.13 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA 0.34 IAI46_01300 thiazole synthase low > 86
Paraburkholderia graminis OAS925 0.13 ABIE53_004566 AraC family transcriptional regulator 0.35 ABIE53_003714 thiazole synthase
Pseudomonas sp. S08-1 0.11 OH686_16830 Transcriptional regulator, AraC family 0.87 OH686_14285 Thiazole synthase low > 80

Not shown: 1 genomes with orthologs for PP_2173 only; 50 genomes with orthologs for PP_5104 only