Conservation of cofitness between PP_2215 and PP_2337 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2215 acetyl-CoA acetyltransferase 1.0 PP_2337 aconitate isomerase 0.26 13
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_25685 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) 0.84 AO353_00885 3-methylitaconate isomerase 0.41 12
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_2982 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.86 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.45 4
Pseudomonas fluorescens SBW25 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.27 17
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4786 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.84 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase — —
Pseudomonas sp. RS175 0.84 PFR28_01882 Acetyl-CoA acetyltransferase 0.82 PFR28_02924 2-methyl-aconitate isomerase 0.54 15
Pseudomonas simiae WCS417 0.84 PS417_13855 acetyl-CoA acetyltransferase 0.84 PS417_21065 3-methylitaconate isomerase 0.24 4
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_1145 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.83 Pf6N2E2_6064 2-methylaconitate isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_26350 acetyl-CoA acetyltransferase 0.83 AO356_20880 3-methylitaconate isomerase 0.22 66
Pseudomonas stutzeri RCH2 0.76 Psest_2446 acetyl-CoA acetyltransferases 0.80 Psest_2318 probable AcnD-accessory protein PrpF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3031 Thiolase 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3031 Thiolase 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas sp. S08-1 0.74 OH686_00870 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase 0.82 OH686_01675 probable AcnD-accessory protein PrpF — —
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS01125 acetyl-CoA C-acetyltransferase 0.82 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF 0.32 112
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_02089 acetyl-CoA C-acetyltransferase 0.80 H281DRAFT_02982 2-methylaconitate cis-trans isomerase low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_000590 acetyl-CoA C-acetyltransferase 0.81 ABIE53_005044 putative AcnD-accessory protein PrpF low > 113
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS02230 acetyl-CoA acetyltransferase 0.81 BPHYT_RS30140 3-methylitaconate isomerase low > 109
Ralstonia solanacearum PSI07 0.65 RPSI07_RS22800 acetyl-CoA C-acyltransferase 0.83 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF low > 81
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS06305 acetyl-CoA C-acetyltransferase 0.83 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF 0.56 5
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS25380 acetyl-CoA acetyltransferase 0.85 RR42_RS11275 3-methylitaconate isomerase 0.29 87
Ralstonia solanacearum UW163 0.64 UW163_RS03065 acetyl-CoA C-acyltransferase 0.81 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS10515 acetyl-CoA C-acyltransferase 0.81 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF low > 76
Ralstonia solanacearum GMI1000 0.64 RS_RS01355 acetyl-CoA C-acyltransferase 0.83 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF low > 80
Acidovorax sp. GW101-3H11 0.63 Ac3H11_2994 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) 0.76 Ac3H11_2325 2-methylaconitate cis-trans isomerase — —
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_2511 acetyl-CoA acetyltransferases 0.76 B158DRAFT_1346 2-methylaconitate cis-trans isomerase low > 40
Variovorax sp. OAS795 0.60 ABID97_RS25195 acetyl-CoA C-acyltransferase 0.59 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF low > 91
Variovorax sp. SCN45 0.60 GFF1993 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.80 GFF269 2-methylaconitate isomerase low > 127
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS04635 acetyl-CoA acetyltransferase 0.78 HSERO_RS11420 3-methylitaconate isomerase — —
Azospirillum brasilense Sp245 0.59 AZOBR_RS28180 acetyl-CoA acetyltransferase 0.75 AZOBR_RS24310 3-methylitaconate isomerase low > 97
Shewanella loihica PV-4 0.59 Shew_1667 acetyl-CoA acetyltransferase (RefSeq) 0.74 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.46 18
Shewanella amazonensis SB2B 0.59 Sama_1375 Acetyl-CoA C-acetyltransferase (RefSeq) 0.75 Sama_3297 hypothetical protein (RefSeq) low > 62
Marinobacter adhaerens HP15 0.58 HP15_1009 acyl-CoA thiolase 0.76 HP15_1929 AcnD-accessory protein PrpF — —
Acinetobacter radioresistens SK82 0.58 MPMX26_02383 Acetyl-CoA acetyltransferase 0.78 MPMX26_00659 2-methyl-aconitate isomerase low > 36
Alteromonas macleodii MIT1002 0.58 MIT1002_01671 Acetyl-CoA acetyltransferase 0.72 MIT1002_03132 3-methylitaconate isomerase — —
Shewanella sp. ANA-3 0.57 Shewana3_2771 acetyl-CoA acetyltransferases (RefSeq) 0.81 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.55 24
Shewanella oneidensis MR-1 0.57 SO1677 atoB 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) 0.81 SO0342 conserved hypothetical protein (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.52 ABIE51_RS13145 acetyl-CoA C-acyltransferase 0.83 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS20570 acetyl-CoA C-acyltransferase 0.81 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF low > 74
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.3647.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.81 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.51 17

Not shown: 23 genomes with orthologs for PP_2215 only; 1 genomes with orthologs for PP_2337 only