Conservation of cofitness between PP_2337 and PP_2336 in Pseudomonas putida KT2440

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2337 aconitate isomerase 1.0 PP_2336 aconitate hydratase 1 0.72 1
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.90 PfGW456L13_4116 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.92 1
Cupriavidus basilensis FW507-4G11 0.85 RR42_RS11275 3-methylitaconate isomerase 0.84 RR42_RS11270 aconitate hydratase 0.97 1
Pseudomonas simiae WCS417 0.84 PS417_21065 3-methylitaconate isomerase 0.89 PS417_21070 aconitate hydratase 0.41 6
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_00885 3-methylitaconate isomerase 0.90 AO353_00890 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.69 2
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.90 Pf1N1B4_3821 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) — —
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.88 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.65 1
Pseudomonas fluorescens SBW25 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.88 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.67 1
Ralstonia solanacearum PSI07 0.83 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF 0.85 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.81 1
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_6064 2-methylaconitate isomerase 0.91 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.82 1
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_20880 3-methylitaconate isomerase 0.90 AO356_20875 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.74 1
Ralstonia sp. UNC404CL21Col 0.83 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF 0.85 ABZR87_RS16735 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.94 1
Lysobacter sp. OAE881 0.83 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF 0.82 ABIE51_RS09495 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Ralstonia solanacearum GMI1000 0.83 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF 0.86 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.79 1
Pseudomonas sp. RS175 0.82 PFR28_02924 2-methyl-aconitate isomerase 0.90 PFR28_02925 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.86 1
Pseudomonas sp. S08-1 0.82 OH686_01675 probable AcnD-accessory protein PrpF 0.81 OH686_01680 2-methylisocitrate dehydratase, Fe/S-dependent — —
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF 0.85 QEN71_RS31060 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.37 89
Shewanella sp. ANA-3 0.81 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.83 Shewana3_3827 aconitate hydratase (RefSeq) 0.98 1
Xanthomonas campestris pv. campestris strain 8004 0.81 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.84 Xcc-8004.3979.1 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.79 3
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF 0.84 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.68 1
Ralstonia solanacearum UW163 0.81 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF 0.84 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Dyella japonica UNC79MFTsu3.2 0.81 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF 0.84 ABZR86_RS08435 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.79 1
Shewanella oneidensis MR-1 0.81 SO0342 conserved hypothetical protein (NCBI ptt file) 0.84 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) 0.93 1
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS30140 3-methylitaconate isomerase 0.83 BPHYT_RS30145 aconitate hydratase 0.31 1
Paraburkholderia graminis OAS925 0.81 ABIE53_005044 putative AcnD-accessory protein PrpF 0.83 ABIE53_005043 iron-sulfur-dependent 2-methylisocitrate dehydratase 0.42 1
Pseudomonas stutzeri RCH2 0.80 Psest_2318 probable AcnD-accessory protein PrpF 0.80 Psest_2319 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent — —
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_02982 2-methylaconitate cis-trans isomerase 0.83 H281DRAFT_02981 aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.73 1
Variovorax sp. SCN45 0.80 GFF269 2-methylaconitate isomerase 0.86 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) 0.97 1
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.88 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.88 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 86
Herbaspirillum seropedicae SmR1 0.78 HSERO_RS11420 3-methylitaconate isomerase 0.87 HSERO_RS11425 aconitate hydratase — —
Acinetobacter radioresistens SK82 0.78 MPMX26_00659 2-methyl-aconitate isomerase 0.80 MPMX26_02481 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.77 2
Marinobacter adhaerens HP15 0.76 HP15_1929 AcnD-accessory protein PrpF 0.82 HP15_1930 aconitate hydratase 1 — —
Acidovorax sp. GW101-3H11 0.76 Ac3H11_2325 2-methylaconitate cis-trans isomerase 0.82 Ac3H11_2323 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) — —
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_1346 2-methylaconitate cis-trans isomerase 0.81 B158DRAFT_1345 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent 0.93 1
Shewanella amazonensis SB2B 0.75 Sama_3297 hypothetical protein (RefSeq) 0.83 Sama_3296 aconitate hydratase (RefSeq) 0.81 1
Shewanella loihica PV-4 0.74 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.82 Shew_1822 aconitate hydratase (RefSeq) 0.90 1
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 0.78 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 62
Alteromonas macleodii MIT1002 0.72 MIT1002_03132 3-methylitaconate isomerase 0.82 MIT1002_03131 Aconitate hydratase 1 — —

Not shown: 2 genomes with orthologs for PP_2337 only; 9 genomes with orthologs for PP_2336 only