Conservation of cofitness between PP_2328 and PP_2327 in Pseudomonas putida KT2440

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2328 Phosphoadenosine phosphosulfate reductase 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.71 3
Pseudomonas simiae WCS417 0.92 PS417_21125 phosphoadenosine phosphosulfate reductase 0.96 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25 0.92 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas sp. RS175 0.91 PFR28_02935 Phosphoadenosine phosphosulfate reductase 0.96 PFR28_00966 HTH-type transcriptional regulator CysB — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_00935 phosphoadenosine phosphosulfate reductase 0.97 AO353_19060 CysB family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_6054 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4125 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.72 36
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_20830 phosphoadenosine phosphosulfate reductase 0.97 AO356_03180 CysB family transcriptional regulator 0.48 74
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_3812 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas stutzeri RCH2 0.85 Psest_2328 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase 0.91 Psest_2329 Transcriptional regulator — —
Marinobacter adhaerens HP15 0.68 HP15_1853 phosphoadenosine phosphosulfate reductase 0.80 HP15_1854 transcriptional regulator, LysR family — —
Acinetobacter radioresistens SK82 0.66 MPMX26_00649 Phosphoadenosine phosphosulfate reductase 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR low > 36
Castellaniella sp019104865 MT123 0.40 ABCV34_RS14110 phosphoadenylyl-sulfate reductase 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator low > 48
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS15560 phosphoadenosine phosphosulfate reductase 0.47 HSERO_RS08245 CysB family transcriptional regulator low > 78
Ralstonia solanacearum PSI07 0.35 RPSI07_RS12785 phosphoadenylyl-sulfate reductase 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.34 RS_RS12160 phosphoadenylyl-sulfate reductase 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator low > 80
Dechlorosoma suillum PS 0.33 Dsui_1984 thioredoxin-dependent adenylylsulfate APS reductase 0.52 Dsui_1988 transcriptional regulator — —
Lysobacter sp. OAE881 0.21 ABIE51_RS15835 phosphoadenylyl-sulfate reductase 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.97 7
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.1256.1 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.81 20
Pantoea sp. MT58 0.19 IAI47_04160 phosphoadenylyl-sulfate reductase 0.67 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS05895 phosphoadenylyl-sulfate reductase 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.98 3
Rhodanobacter denitrificans MT42 0.19 LRK55_RS00695 phosphoadenylyl-sulfate reductase 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS00920 phosphoadenylyl-sulfate reductase 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.58 6
Dickeya dadantii 3937 0.18 DDA3937_RS16935 phosphoadenylyl-sulfate reductase 0.68 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Serratia liquefaciens MT49 0.18 IAI46_03695 phosphoadenylyl-sulfate reductase 0.68 IAI46_13965 HTH-type transcriptional regulator CysB — —
Pectobacterium carotovorum WPP14 0.18 HER17_RS04245 phosphoadenylyl-sulfate reductase 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB 0.94 11
Dickeya dianthicola 67-19 0.18 HGI48_RS17005 phosphoadenylyl-sulfate reductase 0.69 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Dickeya dianthicola ME23 0.18 DZA65_RS18080 phosphoadenylyl-sulfate reductase 0.68 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_05970 cysH phosphoadenylyl-sulfate reductase 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Shewanella oneidensis MR-1 0.17 SO3736 cysH phosphoadenosine phosphosulfate reductase (NCBI ptt file) 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.78 61
Shewanella amazonensis SB2B 0.17 Sama_2837 phosphoadenosine phosphosulfate reductase (RefSeq) 0.66 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Enterobacter sp. TBS_079 0.17 MPMX20_03641 Phosphoadenosine phosphosulfate reductase 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Erwinia tracheiphila SCR3 0.17 LU632_RS06410 phosphoadenylyl-sulfate reductase 0.67 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Rahnella sp. WP5 0.17 EX31_RS07895 phosphoadenylyl-sulfate reductase 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB 0.96 10
Klebsiella michiganensis M5al 0.17 BWI76_RS22755 phosphoadenosine phosphosulfate reductase 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2851 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.67 EX28DRAFT_0946 Transcriptional regulator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF4818 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.68 GFF2712 Cys regulon transcriptional activator CysB — —
Escherichia coli ECOR27 0.17 NOLOHH_12195 cysH phosphoadenosine phosphosulfate reductase 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR38 0.17 HEPCGN_19085 cysH phosphoadenosine phosphosulfate reductase 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.17 BNILDI_10745 cysH phosphoadenosine phosphosulfate reductase 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BL21 0.17 ECD_02607 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00971 Phosphoadenosine phosphosulfate reductase 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Escherichia coli ECRC99 0.17 KEDOAH_07745 cysH phosphoadenosine phosphosulfate reductase 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC102 0.17 NIAGMN_18150 cysH phosphoadenosine phosphosulfate reductase 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BW25113 0.17 b2762 cysH phosphoadenosine phosphosulfate reductase (NCBI) 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia coli ECRC98 0.17 JDDGAC_24045 cysH phosphoadenosine phosphosulfate reductase 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.17 OKFHMN_20380 cysH phosphoadenosine phosphosulfate reductase 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.17 ECOLIN_RS15400 phosphoadenosine phosphosulfate reductase 0.67 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Escherichia coli ECRC101 0.17 MCAODC_10905 cysH phosphoadenosine phosphosulfate reductase 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Shewanella loihica PV-4 0.17 Shew_0667 phosphoadenosine phosphosulfate reductase (RefSeq) 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Alteromonas macleodii MIT1002 0.17 MIT1002_03378 Phosphoadenosine phosphosulfate reductase 0.68 MIT1002_02005 Cys regulon transcriptional activator — —
Escherichia fergusonii Becca 0.16 EFB2_01155 Phosphoadenosine phosphosulfate reductase 0.67 EFB2_02652 HTH-type transcriptional regulator CysB — —
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_2162 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.43 B158DRAFT_2455 Transcriptional regulator low > 40

Not shown: 18 genomes with orthologs for PP_2328 only; 15 genomes with orthologs for PP_2327 only