Conservation of cofitness between PP_5093 and PP_1318 in Pseudomonas putida KT2440

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5093 twitching motility protein 1.0 PP_1318 Cytochrome b 0.14 13
Pseudomonas sp. S08-1 0.55 OH686_10970 Twitching motility protein PilT 0.93 OH686_08385 Ubiquinol-cytochrome C reductase, cytochrome B subunit
Shewanella amazonensis SB2B 0.55 Sama_2476 twitching motility protein (RefSeq) 0.73 Sama_3020 ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.55 Psest_0285 pilus retraction protein PilT 0.89 Psest_3278 Cytochrome b subunit of the bc complex
Marinobacter adhaerens HP15 0.55 HP15_289 twitching motility protein PilT 0.79 HP15_546 ubiquinol-cytochrome c reductase, cytochrome b
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_08155 twitching motility protein PilT 0.94 AO353_15250 cytochrome B low > 101
Shewanella sp. ANA-3 0.54 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) 0.73 Shewana3_0602 cytochrome b/b6 domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.54 Shew_1138 twitching motility protein (RefSeq) 0.73 Shew_0571 cytochrome b/b6 domain-containing protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02460 type IV pili twitching motility protein PilT 0.69 CSW01_03050 cytochrome b low > 62
Shewanella oneidensis MR-1 0.54 SO3351 pilT twitching motility protein PilT (NCBI ptt file) 0.72 SO0609 petB ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0195 pilus retraction protein PilT 0.73 B158DRAFT_2101 Cytochrome b subunit of the bc complex low > 40
Rhodanobacter denitrificans MT42 0.54 LRK55_RS04025 type IV pilus twitching motility protein PilT 0.60 LRK55_RS13485 cytochrome bc complex cytochrome b subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS04255 type IV pilus twitching motility protein PilT 0.60 LRK54_RS13770 cytochrome bc complex cytochrome b subunit
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_11130 pilT twitching motility protein PilT 0.57 OKGIIK_03010 qcrB,petB cytochrome b
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1012 Twitching motility protein PilT 0.96 PfGW456L13_1635 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 87
Pseudomonas sp. RS175 0.54 PFR28_04241 Twitching mobility protein 0.96 PFR28_03605 Cytochrome b
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS10420 type IV pilus twitching motility protein PilT 0.55 ABZR86_RS09875 cytochrome bc complex cytochrome b subunit low > 74
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1713.1 Twitching motility protein PilT 0.64 Xcc-8004.2229.1 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 74
Lysobacter sp. OAE881 0.53 ABIE51_RS16055 type IV pilus twitching motility protein PilT 0.64 ABIE51_RS15435 cytochrome bc complex cytochrome b subunit low > 62
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_4602 Twitching motility protein PilT 0.96 Pf6N2E2_5338 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2343 Twitching motility protein PilT 0.95 Pf1N1B4_961 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 87
Pseudomonas simiae WCS417 0.53 PS417_26720 twitching motility protein PilT 0.94 PS417_04160 cytochrome B
Alteromonas macleodii MIT1002 0.53 MIT1002_03060 Twitching mobility protein 0.65 MIT1002_00815 Cytochrome b/c1 low > 70
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.94 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_13430 twitching motility protein PilT 0.96 AO356_17070 cytochrome B 0.26 61
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.94 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Ralstonia solanacearum PSI07 0.52 RPSI07_RS11730 type IV pili twitching motility protein PilT 0.64 RPSI07_RS10510 cytochrome b low > 81
Ralstonia solanacearum GMI1000 0.51 RS_RS13430 type IV pili twitching motility protein PilT 0.64 RS_RS14670 cytochrome b low > 80
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS05570 type IV pili twitching motility protein PilT 0.66 RALBFv3_RS06725 cytochrome b low > 76
Ralstonia solanacearum UW163 0.51 UW163_RS08055 type IV pili twitching motility protein PilT 0.66 UW163_RS06890 cytochrome b
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS01220 type IV pilus twitching motility protein PilT 0.64 ABZR87_RS02380 cytochrome bc complex cytochrome b subunit low > 80
Dechlorosoma suillum PS 0.51 Dsui_0604 pilus retraction protein PilT 0.69 Dsui_1813 cytochrome b subunit of the bc complex
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS17350 twitching motility protein PilT 0.64 RR42_RS18820 cytochrome B low > 128
Variovorax sp. OAS795 0.49 ABID97_RS00255 type IV pilus twitching motility protein PilT 0.60 ABID97_RS22980 cytochrome bc complex cytochrome b subunit low > 91
Variovorax sp. SCN45 0.49 GFF3743 Twitching motility protein PilT 0.60 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) low > 127
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4473 Twitching motility protein PilT 0.60 Ac3H11_4751 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19000 twitching motility protein PilT 0.66 HSERO_RS20240 cytochrome B low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF2721 Twitching motility protein PilT 0.64 GFF1294 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 90
Rhodospirillum rubrum S1H 0.33 Rru_A0118 type II secretion system protein E (NCBI) 0.46 Rru_A0363 Cytochrome b/b6-like (NCBI)

Not shown: 31 genomes with orthologs for PP_5093 only; 17 genomes with orthologs for PP_1318 only