| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4058 | | 1,4-alpha-glucan branching enzyme | 1.0 | PP_0396 | | conserved protein of unknown function | 0.36 | 17 |
| Pseudomonas sp. RS175 | 0.79 | PFR28_01319 | | 1,4-alpha-glucan branching enzyme GlgB | 0.89 | PFR28_04069 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.79 | PfGW456L13_3253 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.89 | PfGW456L13_1195 | | FIG002076: hypothetical protein | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_4678 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.89 | Pf1N1B4_2522 | | FIG002076: hypothetical protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_2117 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.89 | Pf6N2E2_4800 | | yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_01245 | | glycogen branching protein | 0.89 | AO356_14310 | | yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_22945 | | glycogen branching protein | 0.89 | AO353_07340 | | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | 0.89 | PFLU_RS27490 | | YeaH/YhbH family protein | 0.30 | 104 |
| Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS13485 | | 1,4-alpha-glucan branching protein GlgB | 0.89 | PFLU_RS27490 | | YeaH/YhbH family protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.77 | PS417_12805 | | glycogen branching protein | 0.89 | PS417_25835 | | hypothetical protein | 0.39 | 20 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_2491 | | glycogen branching enzyme | 0.89 | Psyr_4632 | | Protein of unknown function DUF444 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_2491 | | glycogen branching enzyme | 0.89 | Psyr_4632 | | Protein of unknown function DUF444 | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_2158 | | alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | 0.86 | Psest_3673 | | Uncharacterized conserved protein | low | > 67 |
| Pseudomonas sp. S08-1 | 0.68 | OH686_01540 | | 1,4-alpha-glucan branching enzyme | 0.87 | OH686_15015 | | UPF0229 protein YeaH | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS17215 | | 1,4-alpha-glucan branching protein GlgB | 0.50 | ABZR87_RS14215 | | YeaH/YhbH family protein | low | > 80 |
| Rhizobium sp. OAE497 | 0.60 | ABIE40_RS30590 | | 1,4-alpha-glucan branching protein GlgB | 0.38 | ABIE40_RS12545 | | YeaH/YhbH family protein | low | > 107 |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS33780 | | glycogen branching protein | 0.54 | BPHYT_RS11185 | | hypothetical protein | 0.24 | 70 |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS17730 | | 1,4-alpha-glucan branching protein GlgB | 0.54 | QEN71_RS07380 | | YeaH/YhbH family protein | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS12510 | | glycogen branching protein | 0.53 | HSERO_RS21695 | | hypothetical protein | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_004826 | | 1,4-alpha-glucan branching enzyme | 0.56 | ABIE53_002317 | | uncharacterized sporulation protein YeaH/YhbH (DUF444 family) | 0.57 | 20 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06050 | | 1,4-alpha-glucan branching enzyme | 0.56 | H281DRAFT_05233 | | hypothetical protein | low | > 103 |
| Azospirillum brasilense Sp245 | 0.55 | AZOBR_RS09455 | | glycogen branching protein | 0.39 | AZOBR_RS12650 | | hypothetical protein | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS15430 | | 1,4-alpha-glucan branching protein GlgB | 0.43 | AMB_RS10890 | | hypothetical protein | — | — |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_03849 | | 1,4-alpha-glucan branching enzyme GlgB | 0.42 | MPMX19_02156 | | hypothetical protein | — | — |
| Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS01485 | | 1,4-alpha-glucan branching enzyme | 0.57 | HER17_RS11155 | | YeaH/YhbH family protein | low | > 75 |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_15700 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | HEPCGN_05095 | yeaH | UPF0229 protein YeaH | low | > 85 |
| Escherichia coli BL21 | 0.53 | ECD_03284 | | 1,4-alpha-glucan branching enzyme | 0.56 | ECD_01753 | | UPF0229 family protein | — | — |
| Escherichia coli BW25113 | 0.53 | b3432 | glgB | glycogen branching enzyme (NCBI) | 0.56 | b1784 | yeaH | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_00269 | | 1,4-alpha-glucan branching enzyme GlgB | 0.56 | OHPLBJKB_01948 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC62 | 0.53 | BNILDI_02840 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | BNILDI_16020 | yeaH | UPF0229 protein YeaH | — | — |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS19640 | | 1,4-alpha-glucan branching enzyme | 0.56 | ECOLIN_RS09945 | | YeaH/YhbH family protein | low | > 52 |
| Escherichia fergusonii Becca | 0.53 | EFB2_00387 | | 1,4-alpha-glucan branching enzyme GlgB | 0.56 | EFB2_02210 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC101 | 0.53 | OKFHMN_16885 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | OKFHMN_26705 | yeaH | UPF0229 protein YeaH | — | — |
| Escherichia coli ECRC101 | 0.53 | MCAODC_07415 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | MCAODC_18705 | yeaH | UPF0229 protein YeaH | — | — |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_14655 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | NIAGMN_01360 | yeaH | UPF0229 protein YeaH | — | — |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_08675 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | NOLOHH_17235 | yeaH | UPF0229 protein YeaH | — | — |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_11255 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | KEDOAH_01405 | yeaH | UPF0229 protein YeaH | — | — |
| Serratia liquefaciens MT49 | 0.53 | IAI46_23940 | | 1,4-alpha-glucan branching protein GlgB | 0.56 | IAI46_14380 | | YeaH/YhbH family protein | low | > 86 |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_20515 | glgB | 1,4-alpha-glucan branching enzyme | 0.56 | JDDGAC_01280 | yeaH | UPF0229 protein YeaH | — | — |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS19855 | | 1,4-alpha-glucan branching protein GlgB | 0.54 | HGI48_RS10250 | | YeaH/YhbH family protein | low | > 71 |
| Pantoea sp. MT58 | 0.52 | IAI47_01680 | | 1,4-alpha-glucan branching enzyme | 0.56 | IAI47_08920 | | YeaH/YhbH family protein | low | > 76 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS20930 | | 1,4-alpha-glucan branching protein GlgB | 0.54 | DZA65_RS10725 | | YeaH/YhbH family protein | low | > 75 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_4115 | | alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | 0.57 | EX28DRAFT_1777 | | Uncharacterized conserved protein | low | > 76 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_04314 | | 1,4-alpha-glucan branching enzyme GlgB | 0.57 | MPMX20_01839 | | hypothetical protein | low | > 85 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS04550 | | 1,4-alpha-glucan branching protein GlgB | 0.45 | ABID97_RS10265 | | YeaH/YhbH family protein | low | > 91 |
| Rahnella sp. WP5 | 0.52 | EX31_RS05025 | | 1,4-alpha-glucan branching enzyme | 0.56 | EX31_RS06255 | | YeaH/YhbH family protein | low | > 89 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS26215 | | glycogen-branching enzyme | 0.56 | BWI76_RS11480 | | hypothetical protein | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF575 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.56 | GFF3472 | | UPF0229 protein YeaH | low | > 78 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS19745 | | 1,4-alpha-glucan branching protein GlgB | 0.54 | DDA3937_RS10240 | | YeaH/YhbH family protein | low | > 74 |
| Sinorhizobium meliloti 1021 | 0.51 | SMc03922 | | glycogen branching protein | 0.40 | SMc01266 | | hypothetical protein | low | > 103 |
| Variovorax sp. SCN45 | 0.51 | GFF6333 | | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | 0.46 | GFF2934 | | FIG002076: hypothetical protein | low | > 127 |
| Shewanella oneidensis MR-1 | 0.50 | SO1494 | glgB | 1,4-alpha-glucan branching enzyme (NCBI ptt file) | 0.55 | SO2883 | | yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | low | > 76 |
| Shewanella amazonensis SB2B | 0.50 | Sama_2453 | | 1,4-alpha-glucan branching enzyme (RefSeq) | 0.54 | Sama_1922 | | yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) | low | > 62 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_2934 | | glycogen branching enzyme (RefSeq) | 0.52 | Shewana3_1637 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.48 | Shew_1168 | | glycogen branching enzyme (RefSeq) | 0.55 | Shew_1832 | | hypothetical protein (RefSeq) | low | > 60 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_1712 | | glycogen branching enzyme | 0.65 | HP15_2934 | | protein YeaH | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_14125 | | 1,4-alpha-glucan branching enzyme | 0.57 | CSW01_09385 | | hypothetical protein | low | > 62 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_11140 | | 1,4-alpha-glucan branching enzyme | 0.39 | CA264_07095 | | hypothetical protein | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.44 | MIT1002_02399 | | 1,4-alpha-glucan branching enzyme GlgB | 0.59 | MIT1002_01232 | | hypothetical protein | — | — |
Not shown: 19 genomes with orthologs for PP_4058 only; 4 genomes with orthologs for PP_0396 only