Conservation of cofitness between PP_2152 and PP_0104 in Pseudomonas putida KT2440

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2152 glycerophosphoryl diester phosphodiesterase 1.0 PP_0104 Cytochrome c oxidase subunit 1 0.21 15
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_00385 glycerophosphodiester phosphodiesterase 0.95 AO353_10835 cytochrome oxidase subunit I low > 101
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3920 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.95 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas simiae WCS417 0.87 PS417_07655 glycerophosphodiester phosphodiesterase 0.97 PS417_00305 cytochrome oxidase subunit I 0.22 6
Pseudomonas sp. RS175 0.87 PFR28_01128 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.96 PFR28_04690 Cytochrome c oxidase subunit 1 low > 88
Pseudomonas fluorescens SBW25 0.87 PFLU_RS07730 glycerophosphodiester phosphodiesterase 0.97 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS07730 glycerophosphodiester phosphodiesterase 0.97 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_2273 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.96 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) 0.25 5
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_02245 glycerophosphodiester phosphodiesterase 0.96 AO356_11165 cytochrome oxidase subunit I low > 104
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4023 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.95 PfGW456L13_614 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas sp. S08-1 0.81 OH686_22010 Glycerophosphoryl diester phosphodiesterase 0.92 OH686_12320 cytochrome c oxidase, subunit I low > 80
Pseudomonas stutzeri RCH2 0.81 Psest_1664 Glycerophosphoryl diester phosphodiesterase 0.91 Psest_4327 cytochrome c oxidase, subunit I low > 67
Marinobacter adhaerens HP15 0.38 HP15_2244 glycerophosphoryl diester phosphodiesterase 0.90 HP15_3772 cytochrome c oxidase, subunit I low > 73
Variovorax sp. SCN45 0.21 GFF2533 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.70 GFF2298 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF1263 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.70 GFF689 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 90
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS01340 glycerophosphodiester phosphodiesterase 0.72 QEN71_RS01500 cytochrome c oxidase subunit I low > 153
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS02485 membrane protein 0.72 BPHYT_RS02645 cytochrome oxidase subunit I
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1230 Glycerophosphoryl diester phosphodiesterase 0.77 B158DRAFT_0136 cytochrome c oxidase, subunit I low > 40
Acidovorax sp. GW101-3H11 0.19 Ac3H11_4784 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.70 Ac3H11_3891 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 79
Ralstonia solanacearum UW163 0.19 UW163_RS13035 glycerophosphodiester phosphodiesterase 0.72 UW163_RS02630 cytochrome c oxidase subunit I
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS15575 glycerophosphodiester phosphodiesterase 0.72 RALBFv3_RS10950 cytochrome c oxidase subunit I low > 76
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_2972 Glycerophosphodiester phosphodiesterase (RefSeq) 0.41 DvMF_0536 cytochrome c oxidase, subunit I (RefSeq) low > 51
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS12950 membrane protein 0.70 RR42_RS01880 cytochrome oxidase subunit I low > 128
Magnetospirillum magneticum AMB-1 0.18 AMB_RS02715 glycerophosphodiester phosphodiesterase 0.57 AMB_RS10960 cytochrome c oxidase subunit I low > 64
Ralstonia solanacearum PSI07 0.18 RPSI07_RS17780 glycerophosphodiester phosphodiesterase 0.72 RPSI07_RS22360 cytochrome c oxidase subunit I low > 81
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_02044 glycerophosphoryl diester phosphodiesterase 0.72 H281DRAFT_01993 cytochrome c oxidase subunit 1 0.26 84
Azospirillum brasilense Sp245 0.18 AZOBR_RS01355 glycerophosphoryl diester phosphodiesterase 0.54 AZOBR_RS10585 cytochrome C oxidase subunit I low > 97
Ralstonia sp. UNC404CL21Col 0.17 ABZR87_RS11105 glycerophosphodiester phosphodiesterase 0.71 ABZR87_RS06800 cytochrome c oxidase subunit I low > 80
Alteromonas macleodii MIT1002 0.17 MIT1002_00492 Glycerophosphoryl diester phosphodiesterase 0.78 MIT1002_04034 Cytochrome c oxidase subunit 1 low > 70
Paraburkholderia graminis OAS925 0.17 ABIE53_000641 glycerophosphoryl diester phosphodiesterase 0.72 ABIE53_000674 cytochrome c oxidase subunit 1 low > 113
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU0176 glycerophosphoryl diester phosphodiesterase family protein (TIGR) 0.40 DVU1815 cytochrome c oxidase, subunit I, putative (TIGR) low > 55
Azospirillum sp. SherDot2 0.16 MPMX19_00062 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.54 MPMX19_00885 Cytochrome c oxidase subunit 1 low > 112
Shewanella amazonensis SB2B 0.16 Sama_3037 glycerophosphoryl diester phosphodiesterase (RefSeq) 0.83 Sama_3484 cytochrome-c oxidase (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.16 SMc03129 hypothetical protein 0.52 SMc00010 cytochrome C oxidase polypeptide I transmembrane protein low > 103
Variovorax sp. OAS795 0.16 ABID97_RS07210 glycerophosphodiester phosphodiesterase 0.70 ABID97_RS23960 cytochrome c oxidase subunit I low > 91
Ralstonia solanacearum GMI1000 0.15 RS_RS06355 glycerophosphodiester phosphodiesterase 0.72 RS_RS01790 cytochrome c oxidase subunit I low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_06415 glycerophosphodiester phosphodiesterase 0.36 CA264_01315 cytochrome c oxidase subunit I
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS18050 glycerophosphodiester phosphodiesterase 0.70 HSERO_RS20785 cytochrome oxidase subunit I low > 78
Agrobacterium fabrum C58 0.14 Atu6144 agrocinopine phosphodiesterase 0.52 Atu0768 cytochrome-c oxidase chain I low > 89
Shewanella loihica PV-4 0.13 Shew_0554 glycerophosphoryl diester phosphodiesterase (RefSeq) 0.81 Shew_0124 cytochrome-c oxidase (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.13 ABCV34_RS03080 glycerophosphodiester phosphodiesterase 0.71 ABCV34_RS13270 cytochrome c oxidase subunit I low > 48
Mycobacterium tuberculosis H37Rv 0.12 Rv0317c Possible glycerophosphoryl diester phosphodiesterase GlpQ2 (glycerophosphodiester phosphodiesterase) 0.42 Rv3043c Probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1)
Shewanella sp. ANA-3 0.12 Shewana3_0585 glycerophosphoryl diester phosphodiesterase (RefSeq) 0.82 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) low > 73

Not shown: 32 genomes with orthologs for PP_2152 only; 20 genomes with orthologs for PP_0104 only