Conservation of cofitness between PFLU_RS29215 and PFLU_RS24645 in Pseudomonas fluorescens SBW25

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS29215 response regulator transcription factor 1.0 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.95 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29215 response regulator transcription factor 1.00 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.45 6
Pseudomonas simiae WCS417 0.99 PS417_27535 chemotaxis protein CheY 0.97 PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 88
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_08995 chemotaxis protein CheY 0.92 AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_855 Autolysis response regulater LytR 0.91 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.35 32
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_12785 chemotaxis protein CheY 0.89 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Pseudomonas sp. RS175 0.86 PFR28_04366 Sensory transduction protein LytR 0.89 PFR28_03512 N-acetylgalactosamine-6-phosphate deacetylase low > 88
Lysobacter sp. OAE881 0.39 ABIE51_RS02955 LytTR family DNA-binding domain-containing protein 0.26 ABIE51_RS01635 N-acetylglucosamine-6-phosphate deacetylase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.830.1 Autolysis response regulater LytR 0.23 Xcc-8004.957.1 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_14425 lytT DNA-binding response regulator 0.28 OKGIIK_14345 nagA N-acetylglucosamine-6-phosphate deacetylase low > 52
Rhodanobacter denitrificans MT42 0.27 LRK55_RS07675 LytTR family DNA-binding domain-containing protein 0.26 LRK55_RS07585 N-acetylglucosamine-6-phosphate deacetylase — —
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07945 LytTR family DNA-binding domain-containing protein 0.26 LRK54_RS07855 N-acetylglucosamine-6-phosphate deacetylase — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS14825 LytTR family DNA-binding domain-containing protein 0.24 ABZR86_RS16045 N-acetylglucosamine-6-phosphate deacetylase low > 74
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_18385 DNA-binding response regulator 0.21 CSW01_08945 N-acetylglucosamine-6-phosphate deacetylase low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS18055 LytTR family DNA-binding domain-containing protein 0.22 ABZR88_RS01260 N-acetylglucosamine-6-phosphate deacetylase low > 71
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0044 two component transcriptional regulator, LytTR family 0.26 Ga0059261_1645 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 68
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS18060 LytR family transcriptional regulator 0.61 HSERO_RS22760 N-acetylglucosamine-6-phosphate deacetylase low > 78
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_1140 Response regulator of the LytR/AlgR family 0.13 Echvi_4311 N-acetylglucosamine-6-phosphate deacetylase low > 79
Alteromonas macleodii MIT1002 0.19 MIT1002_01189 Transcriptional regulatory protein YehT 0.21 MIT1002_00910 N-acetylglucosamine-6-phosphate deacetylase low > 70
Shewanella sp. ANA-3 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) 0.27 Shewana3_3112 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 73
Dickeya dadantii 3937 0.19 DDA3937_RS16365 two-component system response regulator BtsR 0.19 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS10975 DNA-binding response regulator 0.21 CA265_RS18930 N-acetylglucosamine-6-phosphate deacetylase 0.34 83
Erwinia tracheiphila SCR3 0.18 LU632_RS20440 btsR two-component system response regulator BtsR 0.19 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase low > 74
Shewanella oneidensis MR-1 0.18 SO2823 response regulator (NCBI ptt file) 0.26 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 76
Dickeya dianthicola 67-19 0.18 HGI48_RS16465 two-component system response regulator BtsR 0.19 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Dickeya dianthicola ME23 0.18 DZA65_RS17550 two-component system response regulator BtsR 0.18 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase low > 75
Serratia liquefaciens MT49 0.17 IAI46_23615 two-component system response regulator BtsR 0.19 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 86
Enterobacter sp. TBS_079 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR 0.31 MPMX20_04044 N-acetylgalactosamine-6-phosphate deacetylase low > 85
Rahnella sp. WP5 0.17 EX31_RS00780 two-component system response regulator BtsR 0.20 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89
Escherichia coli ECRC98 0.16 JDDGAC_28005 btsR two-component system response regulator BtsR 0.29 JDDGAC_21940 nagA N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli BW25113 0.16 b2125 yehT orf, hypothetical protein (VIMSS) 0.19 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Escherichia coli ECOR27 0.16 NOLOHH_15235 btsR two-component system response regulator BtsR 0.29 NOLOHH_10090 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_01586 Transcriptional regulatory protein BtsR 0.29 OHPLBJKB_00566 N-acetylgalactosamine-6-phosphate deacetylase low > 73
Escherichia coli ECRC100 0.16 OKFHMN_23915 btsR two-component system response regulator BtsR 0.29 OKFHMN_18310 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia fergusonii Becca 0.16 EFB2_01731 Transcriptional regulatory protein BtsR 0.30 EFB2_00684 N-acetylgalactosamine-6-phosphate deacetylase low > 86
Escherichia coli ECRC99 0.16 KEDOAH_04250 btsR two-component system response regulator BtsR 0.29 KEDOAH_09840 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Enterobacter asburiae PDN3 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family 0.30 EX28DRAFT_3191 N-acetylglucosamine-6-phosphate deacetylase low > 76
Escherichia coli ECRC102 0.16 NIAGMN_21850 btsR two-component system response regulator BtsR 0.29 NIAGMN_16070 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli Nissle 1917 0.16 ECOLIN_RS12450 two-component system response regulator BtsR 0.29 ECOLIN_RS18050 N-acetylglucosamine-6-phosphate deacetylase low > 55
Escherichia coli BL21 0.16 ECD_02054 putative response regulator in two-component system withYehU 0.29 ECD_03002 N-acetylgalactosamine-6-phosphate deacetylase low > 61
Escherichia coli ECRC101 0.16 MCAODC_21245 btsR two-component system response regulator BtsR 0.29 MCAODC_08820 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Bacteroides ovatus ATCC 8483 0.16 BACOVA_02521 response regulator receiver domain protein 0.23 BACOVA_03397 N-acetylglucosamine-6-phosphate deacetylase low > 94
Escherichia coli ECOR38 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR 0.30 HEPCGN_17145 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECRC62 0.16 BNILDI_14185 btsR two-component system response regulator BtsR 0.19 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Pectobacterium carotovorum WPP14 0.16 HER17_RS05370 two-component system response regulator BtsR 0.17 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF3820 Two-component response-regulatory protein YehT 0.19 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 78
Bacteroides thetaiotaomicron VPI-5482 0.16 BT1457 two-component system response regulator (NCBI ptt file) 0.23 BT3588 N-acetylglucosamine-6-phosphate deacetylase (NCBI ptt file) low > 81
Klebsiella michiganensis M5al 0.16 BWI76_RS19470 DNA-binding response regulator 0.19 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Shewanella amazonensis SB2B 0.15 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) 0.22 Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 62
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS06285 LytTR family DNA-binding domain-containing protein 0.20 HMPREF1078_RS15565 N-acetylglucosamine-6-phosphate deacetylase low > 61
Azospirillum sp. SherDot2 0.15 MPMX19_06239 Transcriptional regulatory protein BtsR 0.23 MPMX19_03613 N-acetylglucosamine-6-phosphate deacetylase low > 112
Pantoea sp. MT58 0.15 IAI47_05560 response regulator transcription factor 0.21 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Azospirillum brasilense Sp245 0.15 AZOBR_RS22560 transcriptional regulator 0.24 AZOBR_RS11675 N-acetylglucosamine 6-phosphate deacetylase — —
Shewanella loihica PV-4 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) 0.23 Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 60
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS18080 response regulator transcription factor 0.22 HMPREF1058_RS07745 N-acetylglucosamine-6-phosphate deacetylase low > 67
Fusobacterium nucleatum SB010 0.14 HUW76_02600 response regulator transcription factor 0.28 HUW76_07090 N-acetylglucosamine-6-phosphate deacetylase low > 35
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS14405 response regulator transcription factor 0.22 ABI39_RS00260 N-acetylglucosamine-6-phosphate deacetylase low > 72
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS12495 response regulator transcription factor 0.21 HMPREF1181_RS12440 N-acetylglucosamine-6-phosphate deacetylase low > 56

Not shown: 24 genomes with orthologs for PFLU_RS29215 only; 11 genomes with orthologs for PFLU_RS24645 only