| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS08655 | | heme ABC transporter permease | 1.0 | PFLU_RS04140 | | response regulator transcription factor | 0.68 | 4 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS08655 | | heme ABC transporter permease | 1.00 | PFLU_RS04140 | | response regulator transcription factor | 0.27 | 102 |
| Pseudomonas simiae WCS417 | 0.98 | PS417_08700 | | heme ABC transporter permease | 1.00 | PS417_04100 | | chemotaxis protein CheY | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_18860 | | heme ABC transporter permease | 1.00 | AO353_05335 | | chemotaxis protein CheY | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_2558 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 1.00 | Pf6N2E2_3302 | | Dna binding response regulator PrrA (RegA) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_03650 | | heme ABC transporter permease | 1.00 | AO356_07205 | | chemotaxis protein CheY | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_3641 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.99 | Pf1N1B4_1115 | | Dna binding response regulator PrrA (RegA) | — | — |
| Pseudomonas sp. RS175 | 0.94 | PFR28_00867 | | Heme exporter protein C | 0.99 | PFR28_00137 | | Photosynthetic apparatus regulatory protein RegA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_4314 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.98 | PfGW456L13_5048 | | Dna binding response regulator PrrA (RegA) | — | — |
| Pseudomonas putida KT2440 | 0.87 | PP_4325 | | protoheme IX reservoir complex subunit | 0.89 | PP_0888 | | Photosynthetic apparatus regulatory protein RegA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.86 | Psyr_3391 | | Cytochrome c-type biogenesis protein CcmC | 0.96 | Psyr_4230 | | Helix-turn-helix, Fis-type | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.86 | Psyr_3391 | | Cytochrome c-type biogenesis protein CcmC | 0.96 | Psyr_4230 | | Helix-turn-helix, Fis-type | — | — |
| Pseudomonas stutzeri RCH2 | 0.85 | Psest_1756 | | heme exporter protein CcmC | 0.86 | Psest_3338 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | — | — |
| Pseudomonas sp. S08-1 | 0.75 | OH686_02650 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.82 | OH686_08680 | | Dna binding response regulator PrrA (RegA) | — | — |
| Marinobacter adhaerens HP15 | 0.59 | HP15_2284 | | heme exporter protein CcmC | 0.44 | HP15_3981 | | two component transcriptional regulator, Fis family | — | — |
| Shewanella oneidensis MR-1 | 0.53 | SO0261 | ccmC | heme exporter protein CcmC (NCBI ptt file) | 0.41 | SO4172 | | DNA-binding response regulator (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_0229 | | heme exporter protein CcmC (RefSeq) | 0.41 | Shewana3_3707 | | response regulator receiver protein (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.52 | Shew_0188 | | heme exporter protein CcmC (RefSeq) | 0.40 | Shew_3342 | | two component Fis family transcriptional regulator (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.51 | Sama_0243 | | heme exporter protein CcmC (RefSeq) | 0.43 | Sama_3186 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_1325 | | heme exporter protein CcmC | 0.46 | B158DRAFT_1932 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.91 | 9 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS00725 | | heme ABC transporter (exporter) permease component | 0.40 | AZOBR_RS03415 | | chemotaxis protein CheY | — | — |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_02530 | | Heme exporter protein C | 0.42 | MPMX19_06181 | | Photosynthetic apparatus regulatory protein RegA | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS06430 | | heme ABC transporter permease | 0.54 | ABZR86_RS10115 | | response regulator transcription factor | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.2345.1 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.42 | Xcc-8004.3041.1 | | Dna binding response regulator PrrA (RegA) | — | — |
| Dechlorosoma suillum PS | 0.44 | Dsui_1169 | | heme exporter protein CcmC | 0.59 | Dsui_1180 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | — | — |
| Agrobacterium fabrum C58 | 0.43 | Atu2688 | | ABC transporter, membrane spanning protein (heme) | 0.45 | Atu0050 | | two component response regulator | — | — |
| Sinorhizobium meliloti 1021 | 0.43 | SMc03849 | | heme exporter C (cytochrome C-type biogenesis protein) transmembrane | 0.44 | SMc02584 | | transcriptional regulator | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS18290 | | heme ABC transporter permease | 0.45 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | low | > 107 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS16080 | | heme ABC transporter permease | 0.53 | LRK54_RS04040 | | response regulator transcription factor | — | — |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS15830 | | heme ABC transporter permease | 0.53 | LRK55_RS03810 | | response regulator transcription factor | — | — |
| Bosea sp. OAE506 | 0.42 | ABIE41_RS04985 | | heme ABC transporter permease | 0.42 | ABIE41_RS21050 | | response regulator transcription factor | — | — |
| Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_08570 | ccmC | heme ABC transporter permease | 0.54 | OKGIIK_10900 | | two-component system response regulator | — | — |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS08715 | | heme ABC transporter permease CcmC | 0.38 | ABIE51_RS09795 | | response regulator transcription factor | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.40 | CCNA_03786 | | heme chaperone heme-lyase | 0.45 | CCNA_01845 | | two-component response regulator protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.40 | CCNA_03786 | | heme chaperone heme-lyase | 0.45 | CCNA_01845 | | two-component response regulator protein | low | > 66 |
| Rhodopseudomonas palustris CGA009 | 0.38 | TX73_001060 | | heme ABC transporter permease | 0.42 | TX73_002960 | | ActR/PrrA/RegA family redox response regulator transcription factor | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_0175 | | heme exporter protein CcmC | 0.40 | Ga0059261_1560 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.45 | 64 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_1853 | | heme exporter protein CcmC (RefSeq) | 0.47 | Dshi_3430 | | two component transcriptional regulator, Fis family (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c18870 | | heme exporter protein C | 0.43 | PGA1_c35390 | | photosynthetic apparatus regulatory protein RegA | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS12785 | | heme ABC transporter permease | 0.42 | A4249_RS04475 | | response regulator transcription factor | — | — |
Not shown: 22 genomes with orthologs for PFLU_RS08655 only; 14 genomes with orthologs for PFLU_RS04140 only