Conservation of cofitness between OHPLBJKB_01668 and OHPLBJKB_03235 in Escherichia coli HS(pFamp)R (ATCC 700891)

39 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Escherichia coli HS(pFamp)R (ATCC 700891)	1.0	OHPLBJKB_01668		hypothetical protein	1.0	OHPLBJKB_03235		ATP-dependent Clp protease ATP-binding subunit ClpX	0.62	14
Pseudomonas fluorescens FW300-N2E3	0.57	AO353_10255		ABC transporter	0.75	AO353_20180		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Pseudomonas fluorescens FW300-N1B4	0.57	Pf1N1B4_1963		O-antigen export system permease protein RfbD	0.75	Pf1N1B4_3946		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Pseudomonas fluorescens GW456-L13	0.52	PfGW456L13_2336		O-antigen export system permease protein RfbD	0.75	PfGW456L13_2553		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 87
Pseudomonas fluorescens FW300-N2C3	0.49	AO356_11825		ABC transporter	0.75	AO356_01745		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 104
Pseudomonas sp. S08-1	0.49	OH686_11970		O-antigen export system permease protein RfbD	0.75	OH686_03640		ATP-dependent Clp protease, ATP-binding subunit ClpX	low	> 80
Pseudomonas fluorescens FW300-N2E2	0.49	Pf6N2E2_4240		O-antigen export system permease protein RfbD	0.75	Pf6N2E2_2217		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 103
Pseudomonas sp. RS175	0.47	PFR28_04556		hypothetical protein	0.76	PFR28_01229		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Pseudomonas syringae pv. syringae B728a	0.43	Psyr_0917		ABC-2	0.76	Psyr_1748		ATP-dependent Clp protease ATP-binding subunit ClpX	0.47	50
Pseudomonas syringae pv. syringae B728a ΔmexB	0.43	Psyr_0917		ABC-2	0.76	Psyr_1748		ATP-dependent Clp protease ATP-binding subunit ClpX	0.45	43
Pseudomonas putida KT2440	0.42	PP_1778		Lipopolysaccharide ABC export system, permease protein	0.76	PP_2301		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Azospirillum brasilense Sp245	0.40	AZOBR_RS33925		ABC transporter	0.69	AZOBR_RS07140		ATP-dependent protease	—	—
Rhodanobacter sp. FW510-T8	0.40	OKGIIK_01190		Transport permease protein	0.74	OKGIIK_08035	clpX	ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Xanthomonas campestris pv. campestris strain 8004	0.39	Xcc-8004.4513.1		O-antigen export system permease protein RfbD	0.75	Xcc-8004.4047.1		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Magnetospirillum magneticum AMB-1	0.28	AMB_RS05435		ABC transporter permease	0.69	AMB_RS14040		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Paraburkholderia graminis OAS925	0.24	ABIE53_001154		lipopolysaccharide transport system permease protein	0.72	ABIE53_002116		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 113
Paraburkholderia sabiae LMG 24235	0.23	QEN71_RS25730		ABC transporter permease	0.72	QEN71_RS21980		ATP-dependent Clp protease ATP-binding subunit ClpX	0.68	11
Paraburkholderia bryophila 376MFSha3.1	0.23	H281DRAFT_04827		lipopolysaccharide transport system permease protein	0.72	H281DRAFT_00897		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Bosea sp. OAE506	0.23	ABIE41_RS03025		ABC transporter permease	0.70	ABIE41_RS18055		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Pseudomonas simiae WCS417	0.23	PS417_20640		sugar ABC transporter permease	0.75	PS417_17230		Clp protease ATP-binding protein	—	—
Burkholderia phytofirmans PsJN	0.22	BPHYT_RS21440		sugar ABC transporter permease	0.72	BPHYT_RS09455		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Synechococcus elongatus PCC 7942	0.22	Synpcc7942_1126		ABC transporter permease protein	0.58	Synpcc7942_2526	clpX	ATP-dependent protease ATP-binding subunit	low	> 38
Dyella japonica UNC79MFTsu3.2	0.22	ABZR86_RS18750		ABC transporter permease	0.75	ABZR86_RS07325		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Rhodanobacter denitrificans MT42	0.21	LRK55_RS05405		ABC transporter permease	0.74	LRK55_RS16455		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 63
Pantoea sp. MT58	0.21	IAI47_07010		ABC transporter permease	0.95	IAI47_14650		ATP-dependent protease ATP-binding subunit ClpX	—	—
Serratia liquefaciens MT49	0.21	IAI46_08125		ABC transporter permease	0.94	IAI46_05015		ATP-dependent protease ATP-binding subunit ClpX	—	—
Rahnella sp. WP5	0.21	EX31_RS11480		ABC transporter permease	0.95	EX31_RS22250		ATP-dependent protease ATP-binding subunit ClpX	low	> 89
Echinicola vietnamensis KMM 6221, DSM 17526	0.21	Echvi_2592		ABC-type polysaccharide/polyol phosphate export systems, permease component	0.49	Echvi_4635		endopeptidase Clp ATP-binding regulatory subunit (clpX)	—	—
Acidovorax sp. GW101-3H11	0.20	Ac3H11_1901		ABC transporter permease protein	0.72	Ac3H11_936		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Desulfovibrio vulgaris Hildenborough JW710	0.19	DVUA0077		ABC transporter, permease protein (TIGR)	0.60	DVU1336	clpX	ATP-dependent Clp protease, ATP-binding subunit ClpX (TIGR)	—	—
Rhodanobacter denitrificans FW104-10B01	0.18	LRK54_RS05655		ABC transporter permease	0.74	LRK54_RS16730		ATP-dependent Clp protease ATP-binding subunit ClpX	0.90	7
Pedobacter sp. GW460-11-11-14-LB5	0.18	CA265_RS01800		ABC transporter permease	0.50	CA265_RS04275		ATP-dependent protease ATP-binding subunit ClpX	low	> 88
Phocaeicola dorei CL03T12C01	0.18	ABI39_RS13680		ABC transporter permease	0.48	ABI39_RS02325		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Lysobacter sp. OAE881	0.17	ABIE51_RS04300		ABC transporter permease	0.74	ABIE51_RS14150		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Castellaniella sp019104865 MT123	0.16	ABCV34_RS12950		ABC transporter permease	0.69	ABCV34_RS05130		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Rhodospirillum rubrum S1H	0.15	Rru_B0027		ABC-2 (NCBI)	0.67	Rru_A1551		ClpX, ATPase regulatory subunit (NCBI)	—	—
Phocaeicola vulgatus CL09T03C04	0.15	HMPREF1058_RS06735		ABC transporter permease	0.48	HMPREF1058_RS03080		ATP-dependent Clp protease ATP-binding subunit ClpX	low	> 67
Bifidobacterium breve UCC2003	0.15	BBR_RS19765		ABC transporter permease	0.52	BBR_RS14520		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Variovorax sp. OAS795	0.11	ABID97_RS05720		ABC transporter permease	0.72	ABID97_RS17595		ATP-dependent Clp protease ATP-binding subunit ClpX	—	—
Mycobacterium tuberculosis H37Rv	0.10	Rv3783		Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD	0.60	Rv2457c		Probable ATP-dependent CLP protease ATP-binding subunit ClpX	—	—

Not shown: 1 genomes with orthologs for OHPLBJKB_01668 only; 61 genomes with orthologs for OHPLBJKB_03235 only