Conservation of cofitness between NOLOHH_11130 and NOLOHH_03500 in Escherichia coli ECOR27

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_11130 yggR Uncharacterized protein YggR 1.0 NOLOHH_03500 sltY murein transglycosylase low > 75
Escherichia coli ECRC62 1.00 BNILDI_09710 yggR Uncharacterized protein YggR 1.00 BNILDI_08095 sltY murein transglycosylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00766 putative protein YggR 1.00 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_18565 yggR Uncharacterized protein YggR 1.00 HEPCGN_09175 sltY murein transglycosylase low > 87
Escherichia coli ECRC98 0.98 JDDGAC_22890 yggR Uncharacterized protein YggR 1.00 JDDGAC_14765 sltY murein transglycosylase low > 86
Escherichia coli BL21 0.98 ECD_02780 putative PilT family AAA+ ATPase 1.00 ECD_04268 lytic murein transglycosylase, soluble low > 61
Escherichia coli BW25113 0.98 b2950 yggR putative protein transport (VIMSS) 1.00 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Escherichia coli ECRC101 0.98 MCAODC_09780 yggR Uncharacterized protein YggR 1.00 MCAODC_01685 sltY murein transglycosylase low > 87
Escherichia coli ECRC102 0.98 NIAGMN_17025 yggR Uncharacterized protein YggR 1.00 NIAGMN_09020 sltY murein transglycosylase — —
Escherichia coli ECRC99 0.98 KEDOAH_08880 yggR Uncharacterized protein YggR 1.00 KEDOAH_16985 sltY murein transglycosylase — —
Escherichia coli ECRC100 0.98 OKFHMN_19260 yggR Uncharacterized protein YggR 1.00 OKFHMN_11170 sltY murein transglycosylase low > 80
Escherichia fergusonii Becca 0.98 EFB2_00952 putative protein YggR 1.00 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS16410 type IV pilus twitching motility protein PilT 1.00 ECOLIN_RS25210 murein transglycosylase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3053 Twitching motility protein PilT 0.92 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_03808 putative protein YggR 0.89 MPMX20_00699 Soluble lytic murein transglycosylase low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2988 pilus retraction protein PilT 0.89 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Klebsiella michiganensis M5al 0.68 BWI76_RS24095 twitching motility protein PilT 0.87 BWI76_RS04185 murein transglycosylase low > 92
Dickeya dadantii 3937 0.60 DDA3937_RS17295 type IV pilus twitching motility protein PilT 0.59 DDA3937_RS18455 murein transglycosylase low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS18430 type IV pilus twitching motility protein PilT 0.58 DZA65_RS19525 murein transglycosylase low > 75
Pantoea sp. MT58 0.60 IAI47_03600 type IV pilus twitching motility protein PilT 0.65 IAI47_16260 murein transglycosylase low > 76
Dickeya dianthicola 67-19 0.60 HGI48_RS17340 type IV pilus twitching motility protein PilT 0.58 HGI48_RS18385 murein transglycosylase low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS03815 type IV pilus twitching motility protein PilT 0.61 HER17_RS02750 murein transglycosylase low > 75
Rahnella sp. WP5 0.55 EX31_RS02680 type IV pilus twitching motility protein PilT 0.63 EX31_RS03985 murein transglycosylase low > 89
Serratia liquefaciens MT49 0.52 IAI46_21405 type IV pilus twitching motility protein PilT 0.65 IAI46_02985 murein transglycosylase low > 86
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02460 type IV pili twitching motility protein PilT 0.30 CSW01_03655 murein transglycosylase low > 62
Dechlorosoma suillum PS 0.47 Dsui_0604 pilus retraction protein PilT 0.12 Dsui_0683 soluble lytic murein transglycosylase-like protein low > 51
Shewanella amazonensis SB2B 0.47 Sama_2476 twitching motility protein (RefSeq) 0.24 Sama_1895 soluble lytic murein transglycosylase, putative (RefSeq) low > 62
Shewanella sp. ANA-3 0.46 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) 0.22 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO3351 pilT twitching motility protein PilT (NCBI ptt file) 0.22 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.46 MIT1002_03060 Twitching mobility protein 0.17 MIT1002_00576 Soluble lytic murein transglycosylase precursor low > 70
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0195 pilus retraction protein PilT 0.17 B158DRAFT_1444 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 40
Variovorax sp. OAS795 0.45 ABID97_RS00255 type IV pilus twitching motility protein PilT 0.11 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS04255 type IV pilus twitching motility protein PilT 0.16 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1713.1 Twitching motility protein PilT 0.15 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_11130 pilT twitching motility protein PilT 0.16 OKGIIK_16395 Lytic transglycosylase low > 52
Shewanella loihica PV-4 0.45 Shew_1138 twitching motility protein (RefSeq) 0.25 Shew_2125 lytic transglycosylase, catalytic (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.45 LRK55_RS04025 type IV pilus twitching motility protein PilT 0.16 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS10420 type IV pilus twitching motility protein PilT 0.16 ABZR86_RS12745 transglycosylase SLT domain-containing protein low > 74
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01220 type IV pilus twitching motility protein PilT 0.12 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Lysobacter sp. OAE881 0.45 ABIE51_RS16055 type IV pilus twitching motility protein PilT 0.15 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0478 pilus retraction ATPase PilT 0.21 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0478 pilus retraction ATPase PilT 0.21 Psyr_3295 SLT low > 86
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11730 type IV pili twitching motility protein PilT 0.12 RPSI07_RS23510 lytic transglycosylase low > 81
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS17350 twitching motility protein PilT 0.12 RR42_RS01405 lytic transglycosylase low > 128
Acinetobacter radioresistens SK82 0.44 MPMX26_02405 Twitching mobility protein 0.10 MPMX26_02666 Soluble lytic murein transglycosylase low > 36
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2343 Twitching motility protein PilT 0.21 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. S08-1 0.43 OH686_10970 Twitching motility protein PilT 0.23 OH686_21900 Soluble lytic murein transglycosylase low > 80
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_13430 twitching motility protein PilT 0.22 AO356_02350 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_08155 twitching motility protein PilT 0.22 AO353_00530 lytic transglycosylase low > 101
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.22 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.22 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1012 Twitching motility protein PilT 0.21 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas stutzeri RCH2 0.43 Psest_0285 pilus retraction protein PilT 0.23 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Pseudomonas simiae WCS417 0.43 PS417_26720 twitching motility protein PilT 0.22 PS417_07550 lytic transglycosylase low > 88
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4602 Twitching motility protein PilT 0.22 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas sp. RS175 0.43 PFR28_04241 Twitching mobility protein 0.22 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2721 Twitching motility protein PilT 0.10 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Pseudomonas putida KT2440 0.38 PP_5093 twitching motility protein 0.21 PP_2130 putative Soluble lytic transglycosylase low > 96

Not shown: 12 genomes with orthologs for NOLOHH_11130 only; 6 genomes with orthologs for NOLOHH_03500 only