Conservation of cofitness between NOLOHH_06505 and NOLOHH_03360 in Escherichia coli ECOR27

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_03360 nhaA Na+/H+ antiporter NhaA 0.66 6
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 1.00 BNILDI_08245 nhaA Na+/H+ antiporter NhaA low > 75
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 1.00 NIAGMN_08880 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 1.00 KEDOAH_17125 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 1.00 OKFHMN_11030 nhaA Na+/H+ antiporter NhaA low > 80
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 1.00 JDDGAC_14625 nhaA Na+/H+ antiporter NhaA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 1.00 OHPLBJKB_03642 Na(+)/H(+) antiporter NhaA low > 73
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 1.00 HEPCGN_09015 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 0.99 EFB2_04024 Na(+)/H(+) antiporter NhaA low > 86
Escherichia coli BL21 0.99 ECD_03698 putative chloramphenical resistance permease 1.00 ECD_00018 sodium-proton antiporter 0.40 27
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 1.00 MCAODC_01545 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.99 b0019 nhaA pH-dependent sodium/proton antiporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 0.99 ECOLIN_RS00105 Na+/H+ antiporter NhaA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.91 GFF1119 Na+/H+ antiporter NhaA type low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.77 EX28DRAFT_3628 Na+/H+ antiporter NhaA low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.76 MPMX20_00722 Na(+)/H(+) antiporter NhaA low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01230 chloramphenicol resistance permease RarD 0.82 BWI76_RS04315 Na+/H+ antiporter NhaA low > 92
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.61 IAI46_03085 Na+/H+ antiporter NhaA low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.59 HER17_RS02850 Na+/H+ antiporter NhaA — —
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.60 LU632_RS02665 nhaA Na+/H+ antiporter NhaA — —
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.69 IAI47_16165 Na+/H+ antiporter NhaA — —
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.62 EX31_RS03890 Na+/H+ antiporter NhaA low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.57 DDA3937_RS18360 Na+/H+ antiporter NhaA — —
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.56 DZA65_RS19435 Na+/H+ antiporter NhaA — —
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.56 HGI48_RS18295 Na+/H+ antiporter NhaA — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.55 CSW01_08180 Na+/H+ antiporter NhaA low > 62
Shewanella oneidensis MR-1 0.59 SO4243 rarD rarD protein (NCBI ptt file) 0.60 SO1336 nhaA Na+/H+ antiporter (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.59 Shewana3_3038 Na+/H+ antiporter NhaA (RefSeq) low > 73
Shewanella loihica PV-4 0.57 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.57 Shew_1042 Na+/H+ antiporter NhaA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.58 Sama_0868 Na+/H+ antiporter (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00151 putative chloramphenical resistance permease RarD 0.47 MIT1002_00520 Sodium/proton antiporter NhaA low > 70
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4754 Protein rarD 0.50 Pf6N2E2_2937 Na+/H+ antiporter NhaA type — —
Pseudomonas sp. RS175 0.48 PFR28_04108 Protein RarD 0.50 PFR28_00526 Na(+)/H(+) antiporter NhaA — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2480 Protein rarD 0.48 Pf1N1B4_3202 Na+/H+ antiporter NhaA type — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1142 Protein rarD 0.50 PfGW456L13_4617 Na+/H+ antiporter NhaA type — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14110 Putative D-serine transporter (from data) 0.51 AO356_05390 sodium:proton antiporter — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07550 chloramphenical resistance permease RarD 0.49 AO353_17055 sodium:proton antiporter — —
Pseudomonas putida KT2440 0.46 PP_0358 conserved membrane protein of unknown function 0.49 PP_1132 Na(+)/H(+) antiporter NhaA 1 low > 96
Pseudomonas fluorescens SBW25 0.46 PFLU_RS27675 EamA family transporter RarD 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS27675 EamA family transporter RarD 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Pseudomonas simiae WCS417 0.46 PS417_26030 chloramphenical resistance permease RarD 0.49 PS417_06545 pH-dependent sodium/proton antiporter — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26035 EamA family transporter RarD 0.47 QEN71_RS19280 Na+/H+ antiporter NhaA low > 153
Magnetospirillum magneticum AMB-1 0.41 AMB_RS06360 EamA family transporter RarD 0.43 AMB_RS12285 Na+/H+ antiporter NhaA — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4698 RarD protein 0.46 Psyr_4210 sodium/proton antiporter, NhaA family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4698 RarD protein 0.46 Psyr_4210 sodium/proton antiporter, NhaA family — —
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) 0.40 DvMF_2989 Na+/H+ antiporter NhaA (RefSeq) low > 51
Lysobacter sp. OAE881 0.38 ABIE51_RS03205 EamA family transporter RarD 0.46 ABIE51_RS04100 Na+/H+ antiporter NhaA — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_3478 rarD protein 0.37 Ga0059261_2282 sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.44 AZOBR_RS12965 sodium:proton antiporter low > 97
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS23555 membrane protein 0.50 HSERO_RS11465 sodium:proton antiporter low > 78
Sinorhizobium meliloti 1021 0.32 SMc02545 hypothetical protein 0.33 SMa1913 Na+/H+ antiporter low > 103
Azospirillum sp. SherDot2 0.31 MPMX19_00476 Protein RarD 0.46 MPMX19_02315 Na(+)/H(+) antiporter NhaA low > 112
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00254 RarD family membrane permease 0.43 CCNA_00459 Na+/H+ antiporter nhaA low > 67
Caulobacter crescentus NA1000 0.31 CCNA_00254 RarD family membrane permease 0.43 CCNA_00459 Na+/H+ antiporter nhaA low > 66
Rhizobium sp. OAE497 0.31 ABIE40_RS06215 EamA family transporter RarD 0.39 ABIE40_RS27960 Na+/H+ antiporter NhaA low > 107
Rhodospirillum rubrum S1H 0.31 Rru_A0706 RarD protein (NCBI) 0.46 Rru_A0128 Na+/H+ antiporter NhaA (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS12695 EamA family transporter RarD 0.31 A4249_RS10415 Na+/H+ antiporter NhaA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1172 Chloramphenicol-sensitive protein rarD 0.37 GFF4701 Na+/H+ antiporter NhaA type low > 90
Pedobacter sp. GW460-11-11-14-LB5 0.11 CA265_RS22830 permease 0.45 CA265_RS05070 Na+/H+ antiporter NhaA low > 88

Not shown: 21 genomes with orthologs for NOLOHH_06505 only; 8 genomes with orthologs for NOLOHH_03360 only