Conservation of cofitness between JDDGAC_28300 and JDDGAC_21590 in Escherichia coli ECRC98

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_21590 kdsD arabinose-5-phosphate isomerase KdsD 0.58 15
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_15725 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_10185 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_08485 kdsD arabinose-5-phosphate isomerase KdsD low > 87
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_17965 kdsD arabinose-5-phosphate isomerase KdsD low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NOLOHH_09765 kdsD arabinose-5-phosphate isomerase KdsD low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_03062 D-arabinose 5-phosphate isomerase low > 61
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_01770 kdsD arabinose-5-phosphate isomerase KdsD low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b3197 kdsD D-arabinose 5-phosphate isomerase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_00503 Arabinose 5-phosphate isomerase KdsD low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 HEPCGN_16840 kdsD arabinose-5-phosphate isomerase KdsD low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.99 ECOLIN_RS18400 arabinose-5-phosphate isomerase KdsD — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 1.00 EFB2_00626 Arabinose 5-phosphate isomerase KdsD low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.89 EX28DRAFT_3251 KpsF/GutQ family protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.89 MPMX20_04103 Arabinose 5-phosphate isomerase KdsD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.91 GFF2941 Arabinose 5-phosphate isomerase (EC 5.3.1.13) low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.83 BWI76_RS25240 D-arabinose 5-phosphate isomerase low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.81 IAI46_22445 arabinose-5-phosphate isomerase KdsD low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.78 HER17_RS20035 arabinose-5-phosphate isomerase KdsD — —
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.78 IAI47_17160 arabinose-5-phosphate isomerase KdsD — —
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.81 HGI48_RS01470 arabinose-5-phosphate isomerase KdsD — —
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.81 DDA3937_RS01555 arabinose-5-phosphate isomerase KdsD — —
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.80 DZA65_RS01535 arabinose-5-phosphate isomerase KdsD — —
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.79 LU632_RS21255 kdsD arabinose-5-phosphate isomerase KdsD — —
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05520 nodulation protein 0.48 RPSI07_RS22105 KpsF/GutQ family sugar-phosphate isomerase low > 81
Ralstonia solanacearum GMI1000 0.63 RS_RS22920 nodulation protein 0.48 RS_RS02045 KpsF/GutQ family sugar-phosphate isomerase — —
Ralstonia solanacearum UW163 0.63 UW163_RS21015 nodulation protein 0.48 UW163_RS02385 KpsF/GutQ family sugar-phosphate isomerase — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18115 nodulation protein 0.48 RALBFv3_RS11195 KpsF/GutQ family sugar-phosphate isomerase — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.48 ABZR87_RS07085 KpsF/GutQ family sugar-phosphate isomerase — —
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS07655 nodulation protein 0.49 HSERO_RS19830 sugar phosphate isomerase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.51 Ac3H11_4270 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.56 AO353_05155 D-arabinose 5-phosphate isomerase — —
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.57 OH686_08515 D-arabinose-5-phosphate isomerase — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.55 PfGW456L13_5009 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.54 Psyr_4142 KpsF/GutQ — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.54 Psyr_4142 KpsF/GutQ — —
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.57 Psest_3308 KpsF/GutQ family protein — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.57 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.57 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase — —
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.80 EX31_RS12425 arabinose-5-phosphate isomerase KdsD — —
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.54 PP_0957 D-arabinose 5-phosphate isomerase low > 96
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.58 PS417_04370 D-arabinose 5-phosphate isomerase — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14625 efflux RND transporter permease subunit 0.42 ABCV34_RS14370 KpsF/GutQ family sugar-phosphate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.55 Pf6N2E2_3262 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.55 AO356_07010 D-arabinose 5-phosphate isomerase — —
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.54 PFR28_00178 Arabinose 5-phosphate isomerase KdsD — —
Rhodopseudomonas palustris CGA009 0.49 TX73_018025 multidrug efflux RND transporter permease subunit 0.41 TX73_004530 KpsF/GutQ family sugar-phosphate isomerase — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.49 QEN71_RS01780 KpsF/GutQ family sugar-phosphate isomerase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.52 GFF2442 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06491 multidrug efflux pump 0.48 H281DRAFT_01922 arabinose-5-phosphate isomerase low > 103
Azospirillum brasilense Sp245 0.44 AZOBR_RS14670 multidrug transporter 0.43 AZOBR_RS18850 arabinose 5-phosphate isomerase low > 97
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07780 nodulation protein 0.49 BPHYT_RS02930 KpsF/GutQ family protein low > 109
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) 0.41 DVU0160 carbohydrate isomerase, KpsF/GutQ family (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1515 acriflavin resistance protein (RefSeq) 0.38 DvMF_2308 KpsF/GutQ family protein (RefSeq) — —
Bosea sp. OAE506 0.41 ABIE41_RS20140 efflux RND transporter permease subunit 0.38 ABIE41_RS06160 KpsF/GutQ family sugar-phosphate isomerase — —
Agrobacterium fabrum C58 0.39 Atu3274 AcrB/AcrD/AcrF family protein 0.40 Atu3774 capsule expression protein — —
Variovorax sp. OAS795 0.39 ABID97_RS06490 efflux RND transporter permease subunit 0.51 ABID97_RS02630 KpsF/GutQ family sugar-phosphate isomerase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS05760 efflux RND transporter permease subunit 0.37 ABIE40_RS16240 KpsF/GutQ family sugar-phosphate isomerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13040 acriflavin resistance protein 0.42 CA264_20105 D-arabinose 5-phosphate isomerase — —
Acinetobacter radioresistens SK82 0.23 MPMX26_02516 Multidrug resistance protein MdtC 0.51 MPMX26_01969 Arabinose 5-phosphate isomerase KdsD — —
Sinorhizobium meliloti 1021 0.23 SMc01457 transport transmembrane protein 0.36 SM_b20830 arabinose-5-phosphate isomerase low > 103
Caulobacter crescentus NA1000 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.40 CCNA_02346 arabinose-5-phosphate isomerase — —
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_03301 cation/multidrug efflux pump AcrB 0.40 CCNA_02346 arabinose-5-phosphate isomerase low > 67
Fusobacterium nucleatum SB010 0.16 HUW76_07660 efflux RND transporter permease subunit 0.40 HUW76_05670 KpsF/GutQ family sugar-phosphate isomerase — —

Not shown: 0 genomes with orthologs for JDDGAC_28300 only; 29 genomes with orthologs for JDDGAC_21590 only