Conservation of cofitness between IAI47_04220 and IAI47_06355 in Pantoea sp. MT58

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_04220 5'/3'-nucleotidase SurE 1.0 IAI47_06355 transcriptional regulator LrhA 0.55 3
Enterobacter sp. TBS_079 0.88 MPMX20_03630 5'/3'-nucleotidase SurE 0.74 MPMX20_03219 HTH-type transcriptional regulator HdfR low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.75 EX28DRAFT_0320 Transcriptional regulator low > 76
Escherichia coli ECRC62 0.88 BNILDI_10845 surE 5'/3'-nucleotidase SurE 0.74 BNILDI_13370 lrhA transcriptional regulator LrhA
Escherichia coli ECRC101 0.88 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.74 OKFHMN_22830 lrhA transcriptional regulator LrhA
Escherichia coli BL21 0.88 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.74 ECD_02214 transcriptional repressor of flagellar, motility and chemotaxis genes low > 60
Erwinia tracheiphila SCR3 0.88 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.93 LU632_RS07960 lrhA transcriptional regulator LrhA
Escherichia coli ECRC102 0.88 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.74 NIAGMN_20600 lrhA transcriptional regulator LrhA
Escherichia coli BW25113 0.88 b2744 surE acid phosphatase (NCBI) 0.74 b2289 lrhA DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) low > 76
Escherichia coli ECOR27 0.88 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 0.74 NOLOHH_14450 lrhA transcriptional regulator LrhA low > 57
Escherichia coli ECRC101 0.88 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.74 MCAODC_13870 lrhA transcriptional regulator LrhA
Escherichia coli ECRC98 0.88 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.74 JDDGAC_26795 lrhA transcriptional regulator LrhA
Escherichia coli ECRC99 0.88 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.74 KEDOAH_05365 lrhA transcriptional regulator LrhA
Escherichia coli Nissle 1917 0.88 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.71 ECOLIN_RS13290 transcriptional regulator LrhA low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.74 OHPLBJKB_01416 HTH-type transcriptional regulator HdfR low > 73
Escherichia fergusonii Becca 0.88 EFB2_01166 5'/3'-nucleotidase SurE 0.74 EFB2_01569 HTH-type transcriptional regulator HdfR low > 86
Klebsiella michiganensis M5al 0.87 BWI76_RS22660 5'/3'-nucleotidase SurE 0.62 BWI76_RS20200 transcriptional regulator LrhA low > 92
Escherichia coli ECOR38 0.87 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.74 HEPCGN_22035 lrhA transcriptional regulator LrhA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.76 GFF1893 LysR family transcriptional regulator lrhA low > 78
Serratia liquefaciens MT49 0.83 IAI46_03775 5'/3'-nucleotidase SurE 0.80 IAI46_17715 transcriptional regulator LrhA low > 86
Rahnella sp. WP5 0.78 EX31_RS07840 5'/3'-nucleotidase SurE 0.76 EX31_RS19440 transcriptional regulator LrhA low > 89
Marinobacter adhaerens HP15 0.49 HP15_1279 stationary-phase survival protein SurE 0.24 HP15_2753 transcriptional regulator protein, LysR family
Dechlorosoma suillum PS 0.46 Dsui_1968 5''/3''-nucleotidase SurE 0.23 Dsui_1371 transcriptional regulator low > 51
Pseudomonas sp. S08-1 0.45 OH686_18170 5'/3'-nucleotidase SurE 0.28 OH686_22455 Transcriptional regulator, LysR family low > 80
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.27 Psyr_3624 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.27 Psyr_3624 transcriptional regulator, LysR family low > 86
Pseudomonas stutzeri RCH2 0.44 Psest_2810 5'/3'-nucleotidase SurE 0.28 Psest_1630 Transcriptional regulator low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) 0.35 GFF3101 LysR family transcriptional regulator lrhA low > 90
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_16600 stationary phase survival protein SurE 0.26 AO353_19100 LysR family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.43 PP_1620 5'(3')-nucleotidase and polyphosphatase 0.27 PP_1863 Transcriptional regulator, LysR family low > 96
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.44 Pf1N1B4_4421 LysR family transcriptional regulator lrhA
Variovorax sp. OAS795 0.43 ABID97_RS10715 5'/3'-nucleotidase SurE 0.40 ABID97_RS22410 LysR substrate-binding domain-containing protein low > 91
Pseudomonas fluorescens SBW25 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.44 PFLU_RS10960 transcriptional regulator LrhA low > 109
Paraburkholderia graminis OAS925 0.43 ABIE53_002054 5'-nucleotidase 0.26 ABIE53_004884 DNA-binding transcriptional LysR family regulator low > 113
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.44 PFLU_RS10960 transcriptional regulator LrhA low > 109
Pseudomonas simiae WCS417 0.43 PS417_06350 stationary phase survival protein SurE 0.26 PS417_08510 LysR family transcriptional regulator low > 88
Variovorax sp. SCN45 0.43 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.39 GFF1753 LysR family transcriptional regulator lrhA low > 127
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS09100 stationary phase survival protein SurE 0.24 BPHYT_RS10150 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.27 PfGW456L13_2241 Transcriptional regulator, LysR family low > 87
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10860 5'/3'-nucleotidase SurE 0.39 ABZR87_RS11285 LysR substrate-binding domain-containing protein
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS13200 stationary phase survival protein SurE 0.47 RR42_RS30590 LysR family transcriptional regulator low > 128
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.42 Pf6N2E2_1500 LysR family transcriptional regulator lrhA low > 103
Pseudomonas sp. RS175 0.40 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.26 PFR28_00975 HTH-type transcriptional regulator HdfR low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_05900 stationary phase survival protein SurE 0.42 AO356_23985 LysR family transcriptional regulator low > 104
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) 0.19 Ac3H11_4527 Transcriptional regulator, LysR family low > 79
Azospirillum brasilense Sp245 0.36 AZOBR_RS15460 5'-nucleotidase 0.27 AZOBR_RS00870 LysR family transcriptional regulator low > 97
Azospirillum sp. SherDot2 0.33 MPMX19_01169 5'-nucleotidase SurE 0.30 MPMX19_05344 HTH-type transcriptional regulator YofA low > 112
Rhodopseudomonas palustris CGA009 0.32 TX73_014710 5'/3'-nucleotidase SurE 0.23 TX73_013870 LysR substrate-binding domain-containing protein low > 86
Sinorhizobium meliloti 1021 0.31 SMc02063 stationary phase survival protein SurE 0.26 SMc00820 transcriptional regulator
Agrobacterium fabrum C58 0.31 Atu1702 stationary-phase survival protein 0.27 Atu0654 transcriptional regulator, LysR family low > 89
Bosea sp. OAE506 0.31 ABIE41_RS15015 5'/3'-nucleotidase SurE 0.28 ABIE41_RS23080 LysR substrate-binding domain-containing protein low > 77
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_0278 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.20 Ga0059261_3000 Transcriptional regulator low > 68
Dinoroseobacter shibae DFL-12 0.23 Dshi_2136 stationary-phase survival protein SurE (RefSeq) 0.24 Dshi_2125 transcriptional regulator, LysR family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.23 PGA1_c10770 5'-nucleotidase SurE 0.22 PGA1_262p02000 putative transcriptional regulator, LysR type low > 62

Not shown: 42 genomes with orthologs for IAI47_04220 only; 4 genomes with orthologs for IAI47_06355 only