| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pantoea sp. MT58 | 1.0 | IAI47_15175 | | DNA polymerase IV | 1.0 | IAI47_02360 | | amino acid ABC transporter ATP-binding protein | 0.27 | 10 |
| Escherichia coli ECRC101 | 0.82 | OKFHMN_09730 | dinB | DNA polymerase IV | 0.88 | OKFHMN_17620 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli ECRC99 | 0.82 | KEDOAH_18425 | dinB | DNA polymerase IV | 0.88 | KEDOAH_10530 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli ECRC98 | 0.82 | JDDGAC_13355 | dinB | DNA polymerase IV | 0.88 | JDDGAC_21240 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli ECRC102 | 0.82 | NIAGMN_07590 | dinB | DNA polymerase IV | 0.88 | NIAGMN_15380 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli BW25113 | 0.82 | b0231 | dinB | DNA polymerase IV (NCBI) | 0.88 | b3271 | yhdZ | predicted amino-acid transporter subunit (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS01780 | | DNA polymerase IV | 0.88 | ECOLIN_RS18790 | | amino acid ABC transporter ATP-binding protein | low | > 52 |
| Escherichia coli BL21 | 0.82 | ECD_00226 | | DNA polymerase IV | 0.88 | ECD_03129 | | putative amino acid ABC transporter ATPase | low | > 60 |
| Escherichia coli ECRC101 | 0.82 | MCAODC_00250 | dinB | DNA polymerase IV | 0.88 | MCAODC_08140 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.82 | OHPLBJKB_03407 | | DNA polymerase IV | 0.88 | OHPLBJKB_00432 | | Glutamine transport ATP-binding protein GlnQ | low | > 73 |
| Escherichia coli ECOR27 | 0.82 | NOLOHH_02095 | dinB | DNA polymerase IV | 0.88 | NOLOHH_09410 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 57 |
| Escherichia coli ECRC62 | 0.82 | BNILDI_00290 | dinB | DNA polymerase IV | 0.88 | BNILDI_02110 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
| Escherichia coli ECOR38 | 0.81 | HEPCGN_07825 | dinB | DNA polymerase IV | 0.88 | HEPCGN_16440 | | ABC transporter ATP-binding protein | low | > 85 |
| Escherichia fergusonii Becca | 0.81 | EFB2_03787 | | DNA polymerase IV | 0.88 | EFB2_00552 | | Glutamine transport ATP-binding protein GlnQ | low | > 86 |
| Enterobacter sp. TBS_079 | 0.81 | MPMX20_00921 | | DNA polymerase IV | 0.89 | MPMX20_04180 | | Glutamine transport ATP-binding protein GlnQ | low | > 85 |
| Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_2657 | | Nucleotidyltransferase/DNA polymerase involved in DNA repair | 0.89 | EX28DRAFT_3324 | | ABC-type polar amino acid transport system, ATPase component | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS01150 | dinB | DNA polymerase IV | 0.90 | LU632_RS19785 | | amino acid ABC transporter ATP-binding protein | low | > 74 |
| Rahnella sp. WP5 | 0.77 | EX31_RS21005 | | DNA polymerase IV | 0.91 | EX31_RS12140 | | amino acid ABC transporter ATP-binding protein | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS04670 | | DNA polymerase IV | 0.87 | HER17_RS20305 | | amino acid ABC transporter ATP-binding protein | low | > 75 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS16575 | | DNA polymerase IV | 0.87 | DDA3937_RS01255 | | amino acid ABC transporter ATP-binding protein | low | > 74 |
| Dickeya dianthicola 67-19 | 0.73 | HGI48_RS16645 | | DNA polymerase IV | 0.87 | HGI48_RS01240 | | amino acid ABC transporter ATP-binding protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.73 | DZA65_RS17735 | | DNA polymerase IV | 0.87 | DZA65_RS01285 | | amino acid ABC transporter ATP-binding protein | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_11635 | | DNA polymerase IV | 0.73 | CSW01_06840 | | amino acid ABC transporter ATP-binding protein | low | > 62 |
| Shewanella loihica PV-4 | 0.56 | Shew_2871 | | DNA polymerase IV (RefSeq) | 0.51 | Shew_3164 | | ABC transporter-related protein (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.56 | SO1114 | dinP | DNA-damage-inducible protein P (NCBI ptt file) | 0.51 | SO1042 | | amino acid ABC transporter, ATP-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_0949 | | DNA polymerase IV (RefSeq) | 0.51 | Shewana3_0880 | | ABC transporter related (RefSeq) | low | > 73 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_18925 | | DNA polymerase IV | 0.81 | OH686_17820 | | Amino acid ABC transporter, ATP-binding protein YhdZ | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1304 | | Nucleotidyltransferase/DNA polymerase involved in DNA repair | 0.79 | Psest_3160 | | ABC-type polar amino acid transport system, ATPase component | — | — |
| Pseudomonas sp. RS175 | 0.44 | PFR28_00492 | | DNA polymerase IV | 0.81 | PFR28_03539 | | Glutamine transport ATP-binding protein GlnQ | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_1397 | | DNA-directed DNA polymerase | 0.81 | Psyr_1075 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS24490 | | DNA polymerase IV | 0.81 | PFLU_RS04975 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_1397 | | DNA-directed DNA polymerase | 0.81 | Psyr_1075 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS24490 | | DNA polymerase IV | 0.81 | PFLU_RS04975 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.44 | Pf6N2E2_2974 | | DNA polymerase IV (EC 2.7.7.7) | 0.81 | Pf6N2E2_5405 | | ABC transporter for D-Alanine, ATPase component (from data) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_3165 | | DNA polymerase IV (EC 2.7.7.7) | 0.81 | Pf1N1B4_914 | | ABC-type polar amino acid transport system, ATPase component | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_05570 | | DNA polymerase IV | 0.81 | AO356_17395 | | glutamine ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas simiae WCS417 | 0.43 | PS417_22830 | | DNA polymerase IV | 0.81 | PS417_04915 | | glutamine ABC transporter ATP-binding protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.43 | PP_1203 | | DNA polymerase IV | 0.80 | PP_1300 | | putative amino acid ABC transporter - ATP-binding subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_16910 | | DNA polymerase IV | 0.81 | AO353_04600 | | glutamine ABC transporter ATP-binding protein | low | > 101 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS15755 | | DNA polymerase IV | 0.56 | RPSI07_RS13330 | | amino acid ABC transporter ATP-binding protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS07995 | | DNA polymerase IV | 0.57 | RS_RS11345 | | amino acid ABC transporter ATP-binding protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS13550 | | DNA polymerase IV | 0.56 | ABZR87_RS15830 | | amino acid ABC transporter ATP-binding protein | low | > 80 |
| Marinobacter adhaerens HP15 | 0.39 | HP15_737 | | DNA polymerase IV | 0.74 | HP15_2193 | | amino-acid ABC transporter ATP-binding protein-like protein | low | > 73 |
| Sinorhizobium meliloti 1021 | 0.37 | SMa2355 | | DNA polymerase IV | 0.75 | SMc02121 | | ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) | low | > 103 |
| Agrobacterium fabrum C58 | 0.35 | Atu5469 | | DNA polymerase IV | 0.76 | Atu1580 | | ABC transporter, nucleotide binding/ATPase protein (amino acid) | low | > 89 |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS27830 | | DNA polymerase IV | 0.76 | ABIE40_RS08800 | | amino acid ABC transporter ATP-binding protein | low | > 107 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.33 | DVU0071 | dinP | DNA polymerase IV (TIGR) | 0.60 | DVU0753 | | amino acid ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_4648 | | DNA polymerase IV (EC 2.7.7.7) | 0.81 | PfGW456L13_1701 | | ABC-type polar amino acid transport system, ATPase component | low | > 87 |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A3530 | | DNA-directed DNA polymerase (NCBI) | 0.75 | Rru_A1001 | | ABC transporter component (NCBI) | low | > 58 |
| Dinoroseobacter shibae DFL-12 | 0.26 | Dshi_0385 | | DNA-directed DNA polymerase (RefSeq) | 0.74 | Dshi_0321 | | ABC transporter related (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.26 | MPMX19_05504 | | DNA polymerase IV | 0.77 | MPMX19_01335 | | Glutamine transport ATP-binding protein GlnQ | low | > 112 |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS21200 | | DNA polymerase IV | 0.76 | AZOBR_RS08670 | | arginine ABC transporter ATP-binding protein | low | > 97 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS08870 | | DNA polymerase IV | 0.67 | QEN71_RS40280 | | amino acid ABC transporter ATP-binding protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS08990 | | DNA polymerase | 0.68 | RR42_RS16370 | | glutamine ABC transporter ATP-binding protein | low | > 128 |
| Variovorax sp. OAS795 | 0.24 | ABID97_RS07995 | | DNA polymerase IV | 0.70 | ABID97_RS20040 | | amino acid ABC transporter ATP-binding protein | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.24 | GFF728 | | DNA polymerase IV (EC 2.7.7.7) | 0.68 | GFF1640 | | amino acid ABC transporter, ATP-binding protein | — | — |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS12020 | | DNA polymerase IV | 0.70 | ABCV34_RS08630 | | amino acid ABC transporter ATP-binding protein | low | > 48 |
| Variovorax sp. SCN45 | 0.23 | GFF5999 | | DNA polymerase IV (EC 2.7.7.7) | 0.72 | GFF1877 | | ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) | — | — |
| Fusobacterium nucleatum SB010 | 0.19 | HUW76_04255 | | DNA polymerase IV | 0.55 | HUW76_06925 | | amino acid ABC transporter ATP-binding protein | 0.90 | 1 |
Not shown: 31 genomes with orthologs for IAI47_15175 only; 6 genomes with orthologs for IAI47_02360 only