Conservation of cofitness between IAI47_06530 and IAI47_00825 in Pantoea sp. MT58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_06530 DNA oxidative demethylase AlkB 1.0 IAI47_00825 glycerol kinase GlpK 0.18 17
Klebsiella michiganensis M5al 0.64 BWI76_RS19890 alpha-ketoglutarate-dependent dioxygenase AlkB 0.88 BWI76_RS27515 glycerol kinase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF1826 Alkylated DNA repair protein AlkB 0.87 GFF2307 Glycerol kinase (EC 2.7.1.30) low > 78
Escherichia coli ECRC102 0.63 NIAGMN_20980 alkB DNA oxidative demethylase AlkB 0.86 NIAGMN_11530 glpK glycerol kinase GlpK — —
Escherichia coli ECRC101 0.63 OKFHMN_23215 alkB DNA oxidative demethylase AlkB 0.86 OKFHMN_13775 glpK glycerol kinase GlpK — —
Escherichia coli ECRC98 0.63 JDDGAC_27175 alkB DNA oxidative demethylase AlkB 0.86 JDDGAC_17400 glpK glycerol kinase GlpK — —
Escherichia coli ECRC99 0.63 KEDOAH_04970 alkB DNA oxidative demethylase AlkB 0.86 KEDOAH_14385 glpK glycerol kinase GlpK — —
Escherichia coli ECRC101 0.63 MCAODC_14265 alkB DNA oxidative demethylase AlkB 0.86 MCAODC_04275 glpK glycerol kinase GlpK — —
Marinobacter adhaerens HP15 0.63 HP15_1028 alkylated DNA repair protein AlkB 0.53 HP15_2166 glycerol kinase low > 73
Escherichia coli BW25113 0.63 b2212 alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) 0.86 b3926 glpK glycerol kinase (NCBI) low > 76
Rahnella sp. WP5 0.63 EX31_RS03140 DNA oxidative demethylase AlkB 0.89 EX31_RS14270 glycerol kinase GlpK low > 89
Escherichia fergusonii Becca 0.62 EFB2_01643 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.86 EFB2_04692 Glycerol kinase low > 86
Escherichia coli BL21 0.62 ECD_02139 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 0.86 ECD_03811 glycerol kinase low > 60
Escherichia coli Nissle 1917 0.62 ECOLIN_RS26540 DNA oxidative demethylase AlkB 0.86 ECOLIN_RS22610 glycerol kinase GlpK — —
Enterobacter asburiae PDN3 0.62 EX28DRAFT_0364 Alkylated DNA repair protein 0.87 EX28DRAFT_4399 glycerol kinase low > 76
Escherichia coli ECOR27 0.62 NOLOHH_14790 alkB DNA oxidative demethylase AlkB 0.86 NOLOHH_05910 glpK glycerol kinase GlpK — —
Escherichia coli ECRC62 0.62 BNILDI_13710 alkB DNA oxidative demethylase AlkB 0.86 BNILDI_05620 glpK glycerol kinase GlpK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01498 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.86 OHPLBJKB_04125 Glycerol kinase low > 73
Escherichia coli ECOR38 0.62 HEPCGN_22480 alkB DNA oxidative demethylase AlkB 0.86 HEPCGN_12420 glpK glycerol kinase GlpK low > 85
Enterobacter sp. TBS_079 0.62 MPMX20_03172 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.87 MPMX20_04543 Glycerol kinase low > 85
Rhodopseudomonas palustris CGA009 0.56 TX73_008860 DNA oxidative demethylase AlkB 0.47 TX73_019190 glycerol kinase GlpK low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS17090 DNA oxidative demethylase AlkB 0.87 HER17_RS00825 glycerol kinase GlpK low > 75
Ralstonia solanacearum PSI07 0.56 RPSI07_RS12045 DNA oxidative demethylase AlkB 0.56 RPSI07_RS09850 glycerol kinase low > 81
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_07205 alkB DNA oxidative demethylase AlkB 0.54 OKGIIK_00030 glpK glycerol kinase GlpK low > 52
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS00890 DNA oxidative demethylase AlkB 0.56 ABZR87_RS03055 glycerol kinase GlpK low > 80
Serratia liquefaciens MT49 0.55 IAI46_16945 DNA oxidative demethylase AlkB 0.90 IAI46_24600 glycerol kinase GlpK low > 86
Dickeya dianthicola ME23 0.55 DZA65_RS04440 DNA oxidative demethylase AlkB 0.87 DZA65_RS21530 glycerol kinase GlpK low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS04560 DNA oxidative demethylase AlkB 0.87 DDA3937_RS00890 glycerol kinase GlpK low > 74
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS18105 DNA oxidative demethylase AlkB 0.56 LRK54_RS06535 glycerol kinase GlpK low > 59
Dickeya dianthicola 67-19 0.54 HGI48_RS04520 DNA oxidative demethylase AlkB 0.87 HGI48_RS20485 glycerol kinase GlpK 0.44 13
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS05255 DNA oxidative demethylase AlkB 0.56 RALBFv3_RS07395 glycerol kinase low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS08370 DNA oxidative demethylase AlkB 0.56 UW163_RS06225 glycerol kinase — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS17960 DNA oxidative demethylase AlkB 0.56 LRK55_RS06280 glycerol kinase GlpK low > 63
Ralstonia solanacearum GMI1000 0.53 RS_RS12875 DNA oxidative demethylase AlkB 0.56 RS_RS15335 glycerol kinase low > 80
Pseudomonas sp. RS175 0.53 PFR28_02492 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.74 PFR28_03368 Glycerol kinase low > 88
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS08355 dioxygenase 0.57 HSERO_RS04875 glycerol kinase low > 78
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_5023 Alkylated DNA repair protein AlkB 0.75 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) low > 87
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2181 Alkylated DNA repair protein AlkB 0.52 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) low > 79
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_27010 alpha-ketoglutarate-dependent dioxygenase 0.75 AO353_04180 glycerol kinase low > 101
Variovorax sp. SCN45 0.51 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) 0.53 GFF2679 Glycerol kinase (EC 2.7.1.30) low > 127
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS23540 alpha-ketoglutarate-dependent dioxygenase 0.55 RR42_RS13810 glycerol kinase low > 128
Pseudomonas putida KT2440 0.51 PP_3400 alpha-ketoglutarate- and Fe(II)-dependent dioxygenase 0.75 PP_1075 glycerol kinase low > 96
Pseudomonas fluorescens SBW25 0.50 PFLU_RS14510 DNA oxidative demethylase AlkB 0.74 PFLU_RS05660 glycerol kinase GlpK low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS14510 DNA oxidative demethylase AlkB 0.74 PFLU_RS05660 glycerol kinase GlpK low > 109
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_437 Alkylated DNA repair protein AlkB 0.75 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) low > 103
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_22760 alpha-ketoglutarate-dependent dioxygenase 0.74 AO356_18250 glycerol kinase low > 104
Variovorax sp. OAS795 0.49 ABID97_RS24835 DNA oxidative demethylase AlkB 0.54 ABID97_RS19965 glycerol kinase GlpK low > 91
Castellaniella sp019104865 MT123 0.49 ABCV34_RS07710 DNA oxidative demethylase AlkB 0.53 ABCV34_RS05865 glycerol kinase GlpK low > 48
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_2915 Alkylated DNA repair protein AlkB 0.74 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas simiae WCS417 0.47 PS417_14100 alpha-ketoglutarate-dependent dioxygenase 0.74 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2985 DNA-N1-methyladenine dioxygenase 0.76 Psyr_3905 glycerol kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2985 DNA-N1-methyladenine dioxygenase 0.76 Psyr_3905 glycerol kinase low > 86
Rhizobium sp. OAE497 0.34 ABIE40_RS19425 alpha-ketoglutarate-dependent dioxygenase AlkB 0.52 ABIE40_RS13710 glycerol kinase GlpK low > 107
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00009 alkylated DNA repair protein AlkB 0.43 CCNA_01281 glycerol kinase low > 67
Caulobacter crescentus NA1000 0.33 CCNA_00009 alkylated DNA repair protein AlkB 0.43 CCNA_01281 glycerol kinase low > 66
Bosea sp. OAE506 0.31 ABIE41_RS00230 alpha-ketoglutarate-dependent dioxygenase AlkB 0.48 ABIE41_RS15215 glycerol kinase GlpK low > 77
Sinorhizobium meliloti 1021 0.31 SMc02566 alkylated DNA repair protein 0.51 SM_b21009 Glycerol kinase (EC 2.7.1.30) (from data) low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS13625 alpha-ketoglutarate-dependent dioxygenase AlkB 0.44 A4249_RS13260 glycerol kinase GlpK low > 48
Dinoroseobacter shibae DFL-12 0.30 Dshi_3572 2OG-Fe(II) oxygenase (RefSeq) 0.51 Dshi_3420 Glycerol kinase (EC 2.7.1.30) (from data) low > 64

Not shown: 1 genomes with orthologs for IAI47_06530 only; 35 genomes with orthologs for IAI47_00825 only