Conservation of cofitness between HSERO_RS01325 and HSERO_RS22990 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS22990 transcriptional regulator 0.37 11
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.49 H281DRAFT_06387 GntR family transcriptional regulator low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.48 ABIE53_004972 GntR family transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.52 QEN71_RS11515 GntR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS11375 acriflavin resistance protein 0.47 BPHYT_RS35385 GntR family transcriptional regulator low > 109
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS11125 efflux RND transporter permease subunit 0.18 ABZR86_RS14705 GntR family transcriptional regulator low > 74
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.18 PFLU_RS24640 GntR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.18 PFLU_RS24640 GntR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.17 PS417_22980 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.49 AO353_28380 GntR family transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.49 OH686_06740 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.20 OH686_23055 Putative alkanesulfonate metabolism utilization regulator low > 80
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.16 Pf1N1B4_837 Trehalose operon transcriptional repressor — —
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.49 Pf6N2E2_1506 Putative alkanesulfonate metabolism utilization regulator low > 103
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.49 AO356_23955 GntR family transcriptional regulator low > 104
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.48 PP_1697 transcriptional regulator, GntR family low > 96
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.48 PFR28_02311 Mannosyl-D-glycerate transport/metabolism system repressor MngR low > 88
Lysobacter sp. OAE881 0.48 ABIE51_RS17595 efflux RND transporter permease subunit 0.20 ABIE51_RS01625 GntR family transcriptional regulator low > 62
Azospirillum sp. SherDot2 0.48 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.21 MPMX19_03609 HTH-type transcriptional repressor NagR low > 112
Ralstonia solanacearum UW163 0.46 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.54 UW163_RS18045 GntR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.54 RALBFv3_RS16690 GntR family transcriptional regulator low > 76
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13180 efflux RND transporter permease subunit 0.54 ABZR87_RS17730 GntR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.53 RPSI07_RS06755 GntR family transcriptional regulator low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.33 RR42_RS15080 GntR family transcriptional regulator low > 128
Ralstonia solanacearum GMI1000 0.46 RS_RS08335 AcrB/AcrD/AcrF family protein 0.54 RS_RS24375 GntR family transcriptional regulator low > 80
Rhodopseudomonas palustris CGA009 0.44 TX73_022880 efflux RND transporter permease subunit 0.14 TX73_003600 phosphonate metabolism transcriptional regulator PhnF low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0346 Acriflavin resistance protein 0.49 Psyr_3135 transcriptional regulator, GntR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0346 Acriflavin resistance protein 0.49 Psyr_3135 transcriptional regulator, GntR family — —
Rhizobium sp. OAE497 0.42 ABIE40_RS17045 efflux RND transporter permease subunit 0.17 ABIE40_RS18580 GntR family transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.42 SM_b20345 efflux protein 0.16 SMc02876 transcriptional regulator — —
Agrobacterium fabrum C58 0.40 Atu5381 AcrB/AcrD/AcrF family protein 0.16 Atu3280 GntR family transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS07500 efflux RND transporter permease subunit 0.16 HER17_RS16070 GntR family transcriptional regulator low > 75
Dickeya dianthicola ME23 0.38 DZA65_RS08250 efflux RND transporter permease subunit 0.21 DZA65_RS17560 GntR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS04730 efflux RND transporter permease subunit 0.22 DDA3937_RS16375 GntR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS07915 efflux RND transporter permease subunit 0.21 HGI48_RS16475 GntR family transcriptional regulator low > 71
Pantoea sp. MT58 0.35 IAI47_21725 efflux RND transporter permease subunit 0.13 IAI47_17920 UTRA domain-containing protein low > 76
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.557.1 cation efflux system protein 0.17 Xcc-8004.953.1 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family low > 74
Caulobacter crescentus NA1000 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.18 CCNA_00454 GntR-family transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.18 CCNA_00454 GntR-family transcriptional regulator low > 67
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08410 AcrB/AcrD/AcrF family protein 0.18 CSW01_17220 phosphonate utilization transcriptional regulator PhnR low > 62
Dinoroseobacter shibae DFL-12 0.24 Dshi_1262 acriflavin resistance protein (RefSeq) 0.16 Dshi_2758 transcriptional regulator, GntR family (RefSeq) low > 64
Bacteroides thetaiotaomicron VPI-5482 0.23 BT1694 transporter, AcrB/D/F family (NCBI ptt file) 0.16 BT2103 transcriptional regulator (NCBI ptt file) low > 81
Phaeobacter inhibens DSM 17395 0.21 PGA1_c24610 integral membrane protein, AcrB/AcrD/AcrF family 0.18 PGA1_c13080 transcriptional regulator, GntR family low > 62

Not shown: 27 genomes with orthologs for HSERO_RS01325 only; 7 genomes with orthologs for HSERO_RS22990 only