Conservation of cofitness between HSERO_RS21710 and HSERO_RS16585 in Herbaspirillum seropedicae SmR1

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21710 antibiotic resistance protein MarC 1.0 HSERO_RS16585 iron ABC transporter permease 0.44 7
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2690 Multiple antibiotic resistance protein marC 0.44 GFF663 Ferric iron ABC transporter, permease protein low > 90
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS26390 antibiotic resistance protein 0.10 BPHYT_RS23965 iron ABC transporter permease low > 109
Azospirillum brasilense Sp245 0.26 AZOBR_RS31980 membrane protein 0.30 AZOBR_RS03155 iron ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.25 MPMX19_05781 hypothetical protein 0.30 MPMX19_01379 hypothetical protein low > 112
Pectobacterium carotovorum WPP14 0.22 HER17_RS05025 MarC family NAAT transporter 0.23 HER17_RS14370 iron ABC transporter permease low > 75
Enterobacter asburiae PDN3 0.21 EX28DRAFT_1204 membrane protein, MarC family 0.10 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Rhodospirillum rubrum S1H 0.21 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) 0.31 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Erwinia tracheiphila SCR3 0.20 LU632_RS19020 MarC family NAAT transporter 0.08 LU632_RS03340 iron ABC transporter permease low > 74
Enterobacter sp. TBS_079 0.20 MPMX20_02261 hypothetical protein 0.10 MPMX20_01120 hypothetical protein low > 85
Shewanella loihica PV-4 0.19 Shew_1911 hypothetical protein (RefSeq) 0.24 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq)
Shewanella amazonensis SB2B 0.18 Sama_1694 hypothetical protein (RefSeq) 0.27 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.18 SMc01232 hypothetical protein 0.24 SMc00775 iron(III) permease low > 103
Rahnella sp. WP5 0.18 EX31_RS14080 MarC family NAAT transporter 0.25 EX31_RS17575 iron ABC transporter permease low > 89
Shewanella sp. ANA-3 0.18 Shewana3_1789 hypothetical protein (RefSeq) 0.29 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Shewanella oneidensis MR-1 0.18 SO2137 conserved hypothetical protein TIGR00427 (NCBI ptt file) 0.31 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) low > 76
Rhizobium sp. OAE497 0.17 ABIE40_RS09370 MarC family protein 0.26 ABIE40_RS21705 iron ABC transporter permease low > 107
Acidovorax sp. GW101-3H11 0.17 Ac3H11_2153 Multiple antibiotic resistance (MarC) -related proteins 0.48 Ac3H11_3971 Ferric iron ABC transporter, permease protein low > 79
Castellaniella sp019104865 MT123 0.17 ABCV34_RS00685 MarC family protein 0.25 ABCV34_RS03550 iron ABC transporter permease
Bosea sp. OAE506 0.16 ABIE41_RS15150 MarC family protein 0.24 ABIE41_RS15165 iron ABC transporter permease
Phaeobacter inhibens DSM 17395 0.16 PGA1_c19770 membrane protein, MarC family 0.32 PGA1_c32540 putative Fe(3+)-transport system protein SfuB low > 62
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_10170 MarC family protein 0.27 CSW01_03210 iron ABC transporter permease low > 62
Variovorax sp. OAS795 0.16 ABID97_RS00755 MarC family protein 0.24 ABID97_RS21260 iron ABC transporter permease low > 91
Dickeya dianthicola ME23 0.16 DZA65_RS10850 YchE family NAAT transporter 0.16 DZA65_RS17205 iron ABC transporter permease low > 75
Dickeya dadantii 3937 0.16 DDA3937_RS10370 YchE family NAAT transporter 0.16 DDA3937_RS16000 iron ABC transporter permease low > 74
Variovorax sp. SCN45 0.16 GFF3614 UPF0056 inner membrane protein YchE 0.24 GFF6761 Ferric iron ABC transporter, permease protein low > 127
Agrobacterium fabrum C58 0.16 Atu1508 hypothetical protein 0.26 Atu0613 ABC transporter, membrane spanning protein low > 89
Dickeya dianthicola 67-19 0.16 HGI48_RS10375 YchE family NAAT transporter 0.16 HGI48_RS16120 iron ABC transporter permease low > 71
Pseudomonas sp. S08-1 0.15 OH686_23600 UPF0056 inner membrane protein MarC 0.27 OH686_11180 Ferric iron ABC transporter, permease protein low > 80
Alteromonas macleodii MIT1002 0.15 MIT1002_03685 putative antibiotic transporter 0.11 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS18900 membrane protein 0.36 RR42_RS04345 iron ABC transporter permease low > 128
Dinoroseobacter shibae DFL-12 0.15 Dshi_1348 multiple antibiotic resistance (MarC)-related protein (RefSeq) 0.32 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq)
Pseudomonas sp. RS175 0.15 PFR28_05211 hypothetical protein 0.27 PFR28_04317 hypothetical protein low > 88
Synechococcus elongatus PCC 7942 0.14 Synpcc7942_1365 Multiple antibiotic resistance (MarC)-related proteins 0.32 Synpcc7942_1407 futB iron(III) ABC transporter permease protein
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_1320 membrane protein, MarC family 0.29 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_60 membrane protein, MarC family 0.25 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_08255 hypothetical protein 0.28 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_13635 hypothetical protein 0.27 AO353_08740 iron ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_3525 membrane protein, MarC family 0.28 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.27 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas simiae WCS417 0.13 PS417_02925 membrane protein 0.27 PS417_27260 iron ABC transporter permease low > 88
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.27 Psyr_0245 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas putida KT2440 0.13 PP_4825 Membrane protein, MarC family 0.26 PP_5195 putative Iron ABC transporter, permease protein low > 96
Pseudomonas fluorescens SBW25 0.13 PFLU_RS03000 MarC family protein 0.28 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS03000 MarC family protein 0.28 PFLU_RS28920 iron ABC transporter permease low > 109
Marinobacter adhaerens HP15 0.12 HP15_3589 multiple antibiotic resistance (MarC)-related protein 0.33 HP15_1455 iron(III) ABC transporter, permease protein low > 73

Not shown: 44 genomes with orthologs for HSERO_RS21710 only; 5 genomes with orthologs for HSERO_RS16585 only