Conservation of cofitness between HSERO_RS01560 and HSERO_RS08100 in Herbaspirillum seropedicae SmR1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01560 transporter 1.0 HSERO_RS08100 nicotinate phosphoribosyltransferase 0.39 4
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS20105 efflux RND transporter permease subunit 0.77 QEN71_RS04445 nicotinate phosphoribosyltransferase low > 153
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS22515 multidrug efflux RND transporter permease subunit 0.78 BPHYT_RS14535 nicotinate phosphoribosyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_03190 multidrug efflux pump 0.77 H281DRAFT_04330 nicotinate phosphoribosyltransferase low > 103
Paraburkholderia graminis OAS925 0.76 ABIE53_004106 multidrug efflux pump 0.78 ABIE53_003069 nicotinate phosphoribosyltransferase low > 113
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS19400 efflux RND transporter permease subunit 0.74 ABZR87_RS10040 nicotinate phosphoribosyltransferase low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS05175 multidrug efflux RND transporter permease subunit 0.75 RPSI07_RS19135 nicotinate phosphoribosyltransferase low > 81
Ralstonia solanacearum UW163 0.72 UW163_RS20755 multidrug efflux RND transporter permease subunit 0.75 UW163_RS11790 nicotinate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit 0.75 RALBFv3_RS14325 nicotinate phosphoribosyltransferase low > 76
Azospirillum sp. SherDot2 0.71 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 0.21 MPMX19_03477 Nicotinate phosphoribosyltransferase low > 112
Ralstonia solanacearum GMI1000 0.71 RS_RS22490 multidrug efflux RND transporter permease subunit 0.74 RS_RS05105 nicotinate phosphoribosyltransferase low > 80
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS27685 multidrug efflux RND transporter permease subunit 0.75 RR42_RS14205 nicotinate phosphoribosyltransferase low > 128
Acidovorax sp. GW101-3H11 0.69 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein 0.70 Ac3H11_2601 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 79
Variovorax sp. SCN45 0.68 GFF429 RND efflux system, inner membrane transporter 0.70 GFF2870 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) low > 127
Variovorax sp. OAS795 0.67 ABID97_RS17350 efflux RND transporter permease subunit 0.71 ABID97_RS10590 nicotinate phosphoribosyltransferase low > 91
Rhizobium sp. OAE497 0.67 ABIE40_RS14875 multidrug efflux RND transporter permease subunit 0.26 ABIE40_RS00645 nicotinate phosphoribosyltransferase low > 107
Pseudomonas sp. RS175 0.66 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 0.49 PFR28_05149 Nicotinate phosphoribosyltransferase 2 low > 88
Sinorhizobium meliloti 1021 0.66 SMc01095 multidrug-efflux system transmembrane protein 0.27 SMc02276 nicotinate phosphoribosyltransferase low > 103
Agrobacterium fabrum C58 0.63 Atu2483 AcrB/AcrD/AcrF family protein 0.26 Atu0213 nicotinate phosphoribosyltransferase low > 89
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.48 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.48 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_27605 transporter 0.49 AO356_08520 nicotinate phosphoribosyltransferase low > 104
Pseudomonas putida KT2440 0.61 PP_3426 Multidrug efflux RND transporter MexF 0.43 PP_4868 Nicotinate phosphoribosyltransferase low > 96
Pseudomonas simiae WCS417 0.61 PS417_13190 transporter 0.48 PS417_02635 nicotinate phosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.48 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.48 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_23960 transporter 0.48 AO353_13320 nicotinate phosphoribosyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3060 Multidrug efflux transporter MexF 0.49 PfGW456L13_129 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS08140 multidrug efflux RND transporter permease subunit 0.73 LRK54_RS14720 nicotinate phosphoribosyltransferase low > 59
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_824 Multidrug efflux transporter MexF 0.49 Pf6N2E2_3585 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 103
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4864 Multidrug efflux transporter MexF 0.49 Pf1N1B4_1386 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Rhodanobacter denitrificans MT42 0.61 LRK55_RS07890 efflux RND transporter permease subunit 0.73 LRK55_RS14435 nicotinate phosphoribosyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_14955 oqxB multidrug efflux RND transporter permease subunit 0.71 OKGIIK_03545 pncB nicotinate phosphoribosyltransferase low > 52
Pseudomonas stutzeri RCH2 0.60 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.48 Psest_1171 nicotinate phosphoribosyltransferase low > 67
Pseudomonas sp. S08-1 0.60 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.48 OH686_03820 nicotinate phosphoribosyltransferase low > 80
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS15400 efflux RND transporter permease subunit 0.73 ABZR86_RS00460 nicotinate phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.57 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB 0.39 IAI47_12750 nicotinate phosphoribosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4246 RND efflux system, inner membrane transporter CmeB 0.39 GFF3695 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 78
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB 0.68 Xcc-8004.4407.1 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 74
Klebsiella michiganensis M5al 0.55 BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB 0.39 BWI76_RS09885 nicotinate phosphoribosyltransferase 0.25 57
Rahnella sp. WP5 0.55 EX31_RS01495 multidrug efflux RND transporter permease subunit 0.39 EX31_RS18130 nicotinate phosphoribosyltransferase low > 89
Enterobacter sp. TBS_079 0.55 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 0.40 MPMX20_01589 Nicotinate phosphoribosyltransferase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.39 EX28DRAFT_2005 nicotinate phosphoribosyltransferase low > 76
Serratia liquefaciens MT49 0.54 IAI46_13385 efflux RND transporter permease subunit 0.41 IAI46_08765 nicotinate phosphoribosyltransferase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09925 multidrug efflux RND transporter permease subunit 0.25 A4249_RS08365 nicotinate phosphoribosyltransferase low > 48

Not shown: 10 genomes with orthologs for HSERO_RS01560 only; 22 genomes with orthologs for HSERO_RS08100 only