Conservation of cofitness between HSERO_RS12590 and HSERO_RS07160 in Herbaspirillum seropedicae SmR1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12590 ethanolamin permease 1.0 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.46 13
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS00030 ethanolamine permease 0.82 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG low > 153
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_02303 ethanolamine:proton symporter, EAT family 0.82 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 103
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS00100 ethanolamine permease 0.83 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase low > 109
Paraburkholderia graminis OAS925 0.80 ABIE53_000359 ethanolamine permease 0.83 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase low > 113
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS21315 ethanolamine permease 0.79 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase low > 128
Rahnella sp. WP5 0.74 EX31_RS20130 ethanolamine permease 0.66 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG low > 89
Klebsiella michiganensis M5al 0.71 BWI76_RS06010 ethanolamine permease 0.66 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase low > 92
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4978 Ethanolamine permease 0.48 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 103
Pseudomonas sp. RS175 0.69 PFR28_03886 putative amino acid permease YhdG 0.48 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15220 ethanolamine permease 0.48 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase low > 104
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1341 Ethanolamine permease 0.48 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 87
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2672 Ethanolamine permease 0.47 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 87
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_06565 ethanolamine permease 0.48 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase low > 101
Pseudomonas sp. S08-1 0.68 OH686_07700 ethanolamine permease 0.50 OH686_01760 3-deoxy-7-phosphoheptulonate synthase low > 80
Pseudomonas simiae WCS417 0.68 PS417_08275 ethanolamin permease 0.48 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase low > 88
Pseudomonas fluorescens SBW25 0.68 PFLU_RS08215 ethanolamine permease 0.48 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS08215 ethanolamine permease 0.48 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.49 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.49 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86
Variovorax sp. OAS795 0.68 ABID97_RS19505 ethanolamine permease 0.65 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase low > 91
Pantoea sp. MT58 0.67 IAI47_14900 ethanolamine permease 0.66 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG low > 76
Dickeya dianthicola 67-19 0.67 HGI48_RS19510 ethanolamine permease 0.66 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG low > 71
Dickeya dadantii 3937 0.67 DDA3937_RS19380 ethanolamine permease 0.66 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG low > 74
Dickeya dianthicola ME23 0.67 DZA65_RS20600 ethanolamine permease 0.66 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2300.1 Ethanolamine permease 0.69 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) low > 74
Acinetobacter radioresistens SK82 0.27 MPMX26_01769 putative amino acid permease YhdG 0.50 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive — —
Pseudomonas putida KT2440 0.24 PP_0544 Ethanolamine transporter 0.50 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase low > 96
Pseudomonas stutzeri RCH2 0.23 Psest_0670 ethanolamine permease 0.50 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase low > 67
Ralstonia solanacearum UW163 0.12 UW163_RS15035 amino acid permease 0.81 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase — —
Ralstonia solanacearum IBSBF1503 0.12 RALBFv3_RS01725 amino acid permease 0.81 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase low > 76
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS13545 amino acid permease 0.82 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Ralstonia solanacearum GMI1000 0.12 RS_RS08000 amino acid permease 0.82 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase low > 80
Ralstonia solanacearum PSI07 0.11 RPSI07_RS15760 amino acid permease 0.82 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase — —
Rhodanobacter denitrificans MT42 0.11 LRK55_RS01310 amino acid permease 0.67 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.11 LRK54_RS01520 amino acid permease 0.67 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase low > 59
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS16130 amino acid permease 0.69 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase low > 74
Caulobacter crescentus NA1000 0.10 CCNA_00435 L-proline transporter (from data) 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_00435 amino acid transporter 0.65 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase low > 67
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_05010 potE amino acid permease 0.68 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase low > 52
Rhodopseudomonas palustris CGA009 0.10 TX73_003040 amino acid permease 0.65 TX73_000140 3-deoxy-7-phosphoheptulonate synthase low > 86
Escherichia coli BW25113 0.09 b0260 ykfD putative amino acid/amine transport protein (VIMSS) 0.67 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) low > 76
Escherichia coli BL21 0.09 ECD_03221 putative fructoselysine transporter 0.67 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.09 OHPLBJKB_00332 putative fructoselysine/psicoselysine transporter FrlA 0.67 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive low > 73
Escherichia coli ECRC99 0.09 KEDOAH_10970 frlA fructoselysine/psicoselysine transporter 0.67 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia coli ECRC102 0.09 NIAGMN_14940 frlA fructoselysine/psicoselysine transporter 0.67 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG — —
Escherichia coli ECRC100 0.09 OKFHMN_17170 frlA fructoselysine/psicoselysine transporter 0.67 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 80
Escherichia coli ECRC101 0.09 MCAODC_07700 frlA fructoselysine/psicoselysine transporter 0.67 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 87
Escherichia coli ECRC98 0.09 JDDGAC_20800 frlA fructoselysine/psicoselysine transporter 0.67 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 86
Escherichia coli ECRC62 0.09 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.67 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Escherichia coli ECOR27 0.09 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.67 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 75
Erwinia tracheiphila SCR3 0.09 LU632_RS03070 aroP aromatic amino acid transporter AroP 0.64 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG low > 74
Castellaniella sp019104865 MT123 0.07 ABCV34_RS10320 amino acid permease 0.70 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG — —

Not shown: 13 genomes with orthologs for HSERO_RS12590 only; 22 genomes with orthologs for HSERO_RS07160 only