Conservation of cofitness between HSERO_RS16335 and HSERO_RS05150 in Herbaspirillum seropedicae SmR1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16335 guanine deaminase 1.0 HSERO_RS05150 galactonate dehydratase 0.29 9
Paraburkholderia graminis OAS925 0.62 ABIE53_003192 guanine deaminase 0.82 ABIE53_003454 galactonate dehydratase low > 113
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS15100 guanine deaminase 0.82 BPHYT_RS16405 galactonate dehydratase [EC: 4.2.1.6] (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_03965 guanine deaminase 0.82 H281DRAFT_04215 galactonate dehydratase low > 103
Castellaniella sp019104865 MT123 0.61 ABCV34_RS12195 guanine deaminase 0.15 ABCV34_RS14760 mandelate racemase/muconate lactonizing enzyme family protein low > 48
Ralstonia solanacearum PSI07 0.61 RPSI07_RS14150 guanine deaminase 0.63 RPSI07_RS11425 galactonate dehydratase low > 81
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS03900 guanine deaminase 0.83 QEN71_RS02295 galactonate dehydratase low > 153
Ralstonia solanacearum GMI1000 0.60 RS_RS10530 guanine deaminase 0.63 RS_RS13765 D-galactonate dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS05320 guanine deaminase 0.24 RR42_RS34970 bifunctional D-altronate/D-mannonate dehydratase low > 128
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS15060 guanine deaminase 0.63 ABZR87_RS01445 galactonate dehydratase low > 80
Pseudomonas simiae WCS417 0.53 PS417_20900 guanine deaminase 0.88 PS417_00165 galactonate dehydratase low > 88
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4087 Guanine deaminase (EC 3.5.4.3) 0.88 PfGW456L13_2128 Galactonate dehydratase (EC 4.2.1.6) low > 87
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS22515 guanine deaminase 0.88 PFLU_RS00160 galactonate dehydratase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS22515 guanine deaminase 0.88 PFLU_RS00160 galactonate dehydratase low > 109
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3850 Guanine deaminase (EC 3.5.4.3) 0.88 Pf1N1B4_398 Galactonate dehydratase (EC 4.2.1.6) low > 87
Pseudomonas sp. RS175 0.52 PFR28_01061 Guanine deaminase 0.88 PFR28_02985 D-galactonate dehydratase low > 88
Variovorax sp. SCN45 0.52 GFF1914 Guanine deaminase (EC 3.5.4.3) 0.25 GFF178 Mannonate dehydratase (EC 4.2.1.8) low > 127
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) 0.88 Pf6N2E2_5977 Galactonate dehydratase (EC 4.2.1.6) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF213 Guanine deaminase (EC 3.5.4.3) 0.19 GFF732 Muconate cycloisomerase (EC 5.5.1.1) low > 90
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_02575 guanine deaminase 0.88 AO356_20290 galactonate dehydratase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1812 guanine deaminase 0.88 Psyr_1989 galactonate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1812 guanine deaminase 0.88 Psyr_1989 galactonate dehydratase low > 86
Variovorax sp. OAS795 0.52 ABID97_RS22045 guanine deaminase 0.18 ABID97_RS09975 L-rhamnonate dehydratase low > 91
Escherichia coli ECOR38 0.50 HEPCGN_18915 guaD guanine deaminase 0.62 HEPCGN_13775 dgoD galactonate dehydratase low > 87
Escherichia coli BL21 0.50 ECD_02716 guanine deaminase 0.62 ECD_03575 D-galactonate dehydratase low > 61
Escherichia coli ECRC62 0.50 BNILDI_10080 guaD guanine deaminase 0.62 BNILDI_04320 dgoD galactonate dehydratase low > 75
Escherichia coli BW25113 0.50 b2883 guaD guanine deaminase (NCBI) 0.62 b4478 dgoD galactonate dehydratase (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_11555 guaD guanine deaminase 0.62 NOLOHH_07210 dgoD galactonate dehydratase low > 75
Escherichia fergusonii Becca 0.50 EFB2_01018 Guanine deaminase 0.62 EFB2_00011 D-galactonate dehydratase low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS16065 guanine deaminase 0.62 ECOLIN_RS21265 galactonate dehydratase low > 55
Caulobacter crescentus NA1000 0.50 CCNA_02699 guanine deaminase 0.26 CCNA_00566 mannonate dehydratase — —
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_02699 guanine deaminase 0.26 CCNA_00566 mannonate dehydratase low > 67
Dickeya dianthicola ME23 0.50 DZA65_RS12690 guanine deaminase 0.63 DZA65_RS07285 galactonate dehydratase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00832 Guanine deaminase 0.62 OHPLBJKB_00011 D-galactonate dehydratase 0.72 45
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1117 Guanine deaminase (EC 3.5.4.3) 0.80 Ac3H11_600 Galactonate dehydratase (EC 4.2.1.6) low > 79
Dickeya dadantii 3937 0.49 DDA3937_RS12145 guanine deaminase 0.26 DDA3937_RS14965 D-galactonate dehydratase family protein low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS12240 guanine deaminase 0.63 HGI48_RS06940 galactonate dehydratase low > 71
Sinorhizobium meliloti 1021 0.48 SM_b21293 guanine deaminase 0.80 SM_b20510 galactonate dehydratase low > 103
Bosea sp. OAE506 0.47 ABIE41_RS21745 guanine deaminase 0.18 ABIE41_RS08260 mandelate racemase/muconate lactonizing enzyme family protein low > 77
Serratia liquefaciens MT49 0.46 IAI46_11780 guanine deaminase 0.25 IAI46_19025 D-galactonate dehydratase family protein low > 86
Rhizobium sp. OAE497 0.46 ABIE40_RS25220 guanine deaminase 0.81 ABIE40_RS17095 galactonate dehydratase low > 107
Klebsiella michiganensis M5al 0.46 BWI76_RS10520 guanine deaminase 0.61 BWI76_RS27935 galactonate dehydratase low > 92
Pantoea sp. MT58 0.45 IAI47_09810 guanine deaminase 0.63 IAI47_00045 galactonate dehydratase low > 76
Enterobacter asburiae PDN3 0.45 EX28DRAFT_1948 guanine deaminase (EC 3.5.4.3) 0.61 EX28DRAFT_3979 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_01658 Guanine deaminase 0.60 MPMX20_00011 D-galactonate dehydratase low > 85
Lysobacter sp. OAE881 0.45 ABIE51_RS09675 guanine deaminase 0.79 ABIE51_RS10935 galactonate dehydratase low > 62
Azospirillum sp. SherDot2 0.45 MPMX19_05617 Guanine deaminase 0.27 MPMX19_03902 D-galactonate dehydratase low > 112
Rahnella sp. WP5 0.43 EX31_RS07035 guanine deaminase 0.63 EX31_RS10320 galactonate dehydratase low > 89
Agrobacterium fabrum C58 0.43 Atu2315 guanine deaminase 0.25 Atu4196 hypothetical protein low > 89
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS02225 guanine deaminase 0.22 HMPREF1078_RS06060 mandelate racemase/muconate lactonizing enzyme family protein low > 61
Phaeobacter inhibens DSM 17395 0.42 PGA1_c21840 guanine deaminase GuaD 0.21 PGA1_c04540 putative d-galactonate dehydratase low > 62
Alteromonas macleodii MIT1002 0.41 MIT1002_01570 Guanine deaminase 0.24 MIT1002_00725 D-galactonate dehydratase low > 70
Dinoroseobacter shibae DFL-12 0.39 Dshi_2771 Guanine deaminase (RefSeq) 0.15 Dshi_2447 Mandelate racemase/muconate lactonizing protein (RefSeq) low > 64

Not shown: 11 genomes with orthologs for HSERO_RS16335 only; 10 genomes with orthologs for HSERO_RS05150 only