Conservation of cofitness between HGI48_RS14410 and HGI48_RS12875 in Dickeya dianthicola 67-19

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14410 colicin V production protein 1.0 HGI48_RS12875 phosphoenolpyruvate synthase 0.71 17
Dickeya dianthicola ME23 1.00 DZA65_RS15340 colicin V production protein 1.00 DZA65_RS13340 phosphoenolpyruvate synthase low > 75
Dickeya dadantii 3937 1.00 DDA3937_RS14440 colicin V production protein 0.97 DDA3937_RS12805 phosphoenolpyruvate synthase low > 74
Pectobacterium carotovorum WPP14 0.96 HER17_RS07015 colicin V production protein 0.92 HER17_RS08885 phosphoenolpyruvate synthase low > 75
Rahnella sp. WP5 0.94 EX31_RS19575 colicin V production protein 0.87 EX31_RS13935 phosphoenolpyruvate synthase low > 89
Serratia liquefaciens MT49 0.93 IAI46_17815 colicin V production protein 0.87 IAI46_11115 phosphoenolpyruvate synthase low > 86
Pantoea sp. MT58 0.89 IAI47_06270 colicin V production protein 0.85 IAI47_10905 phosphoenolpyruvate synthase low > 76
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0291 Uncharacterized membrane protein, required for colicin V production 0.86 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) low > 76
Enterobacter sp. TBS_079 0.87 MPMX20_03248 Colicin V production protein 0.85 MPMX20_01922 Phosphoenolpyruvate synthase low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS20355 colicin V production protein 0.85 BWI76_RS17065 phosphoenolpyruvate synthase low > 92
Escherichia coli ECOR38 0.85 HEPCGN_21905 cvpA colicin V production protein 0.86 HEPCGN_05510 ppsA phosphoenolpyruvate synthase low > 87
Escherichia coli ECOR27 0.85 NOLOHH_14330 cvpA colicin V production protein 0.86 NOLOHH_17665 ppsA phosphoenolpyruvate synthase low > 75
Escherichia fergusonii Becca 0.85 EFB2_01545 Colicin V production protein 0.86 EFB2_02289 Phosphoenolpyruvate synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF1928 Colicin V production protein 0.86 GFF3539 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 78
Escherichia coli BL21 0.85 ECD_02238 colicin V production protein 0.86 ECD_01671 phosphoenolpyruvate synthase low > 61
Escherichia coli Nissle 1917 0.85 ECOLIN_RS13410 colicin V production protein 0.86 ECOLIN_RS09510 phosphoenolpyruvate synthase — —
Escherichia coli ECRC62 0.85 BNILDI_13250 cvpA colicin V production protein 0.86 BNILDI_16455 ppsA phosphoenolpyruvate synthase low > 75
Escherichia coli ECRC102 0.85 NIAGMN_20480 cvpA colicin V production protein 0.86 NIAGMN_00920 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECRC99 0.85 KEDOAH_05485 cvpA colicin V production protein 0.86 KEDOAH_00965 ppsA phosphoenolpyruvate synthase — —
Escherichia coli ECRC98 0.85 JDDGAC_26670 cvpA colicin V production protein 0.86 JDDGAC_01720 ppsA phosphoenolpyruvate synthase low > 86
Escherichia coli ECRC101 0.85 MCAODC_13750 cvpA colicin V production protein 0.86 MCAODC_18265 ppsA phosphoenolpyruvate synthase low > 87
Escherichia coli ECRC100 0.85 OKFHMN_22710 cvpA colicin V production protein 0.86 OKFHMN_27145 ppsA phosphoenolpyruvate synthase low > 80
Escherichia coli BW25113 0.84 b2313 cvpA membrane protein required for colicin V production (NCBI) 0.86 b1702 pps phosphoenolpyruvate synthase (NCBI) low > 76
Shewanella loihica PV-4 0.71 Shew_2303 colicin V production protein (RefSeq) 0.73 Shew_1549 phosphoenolpyruvate synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.69 SO3065 colicin V production protein (NCBI ptt file) 0.74 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2147 colicin V production protein (RefSeq) 0.75 Sama_2072 phosphoenolpyruvate synthase (RefSeq) low > 62
Shewanella sp. ANA-3 0.69 Shewana3_1482 colicin V production protein (RefSeq) 0.74 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_05110 bacteriocin production protein 0.71 CSW01_19050 phosphoenolpyruvate synthase low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_02525 Pur regulon 18 kDa protein 0.74 MIT1002_01816 Phosphoenolpyruvate synthase 0.64 33
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1487 Uncharacterized membrane protein, required for colicin V production 0.70 B158DRAFT_1553 phosphoenolpyruvate synthase (EC 2.7.9.2) low > 40
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_20685 colicin V production CvpA 0.70 AO353_00865 phosphoenolpyruvate synthase low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3936 Colicin V production protein 0.69 PfGW456L13_4112 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1 Colicin V production protein 0.70 Pf1N1B4_3826 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 87
Pseudomonas simiae WCS417 0.35 PS417_18540 colicin V production CvpA 0.70 PS417_21020 phosphoenolpyruvate synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_75 Colicin V production protein 0.69 Pf6N2E2_2389 Phosphoenolpyruvate synthase (EC 2.7.9.2) low > 103
Pseudomonas fluorescens SBW25 0.35 PFLU_RS20520 colicin V production protein CvpA 0.70 PFLU_RS22630 phosphoenolpyruvate synthase low > 109
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_21460 colicin V production CvpA 0.69 AO356_02825 phosphoenolpyruvate synthase low > 104
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS20520 colicin V production protein CvpA 0.70 PFLU_RS22630 phosphoenolpyruvate synthase low > 109
Pseudomonas sp. S08-1 0.34 OH686_04425 Colicin V production protein 0.71 OH686_01660 phosphoenolpyruvate synthase low > 80
Pseudomonas stutzeri RCH2 0.32 Psest_2580 Uncharacterized membrane protein, required for colicin V production 0.71 Psest_2316 phosphoenolpyruvate synthase low > 67
Pseudomonas sp. RS175 0.30 PFR28_02812 hypothetical protein 0.70 PFR28_01038 Phosphoenolpyruvate synthase low > 88
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS14330 bacteriocin production protein 0.63 RR42_RS11790 phosphoenolpyruvate synthase — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS17675 CvpA family protein 0.62 QEN71_RS06505 phosphoenolpyruvate synthase low > 153
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS33845 bacteriocin production protein 0.63 BPHYT_RS12055 phosphoenolpyruvate synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_06061 membrane protein required for colicin V production 0.62 H281DRAFT_00627 phosphoenolpyruvate synthase low > 103
Castellaniella sp019104865 MT123 0.21 ABCV34_RS04135 CvpA family protein 0.63 ABCV34_RS04025 phosphoenolpyruvate synthase — —
Lysobacter sp. OAE881 0.21 ABIE51_RS06175 CvpA family protein 0.65 ABIE51_RS09520 phosphoenolpyruvate synthase — —
Acidovorax sp. GW101-3H11 0.19 Ac3H11_2609 Colicin V production protein 0.64 Ac3H11_206 Phosphoenolpyruvate synthase (EC 2.7.9.2) — —
Ralstonia solanacearum UW163 0.19 UW163_RS11170 colicin V biosynthesis protein 0.61 UW163_RS13805 phosphoenolpyruvate synthase — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS02555 colicin V biosynthesis protein 0.62 RALBFv3_RS00475 phosphoenolpyruvate synthase — —
Ralstonia solanacearum GMI1000 0.18 RS_RS09935 colicin V biosynthesis protein 0.62 RS_RS07130 phosphoenolpyruvate synthase low > 80
Ralstonia solanacearum PSI07 0.18 RPSI07_RS14760 colicin V synthesis protein 0.62 RPSI07_RS17015 phosphoenolpyruvate synthase low > 81
Dechlorosoma suillum PS 0.18 Dsui_3187 putative membrane protein, required for colicin V production 0.65 Dsui_2677 phosphoenolpyruvate synthase — —
Variovorax sp. OAS795 0.18 ABID97_RS21640 CvpA family protein 0.64 ABID97_RS10815 phosphoenolpyruvate synthase — —

Not shown: 3 genomes with orthologs for HGI48_RS14410 only; 20 genomes with orthologs for HGI48_RS12875 only