| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dickeya dianthicola 67-19 | 1.0 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | 1.0 | HGI48_RS10155 | | pyruvate kinase | 0.80 | 10 |
| Dickeya dianthicola ME23 | 0.99 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | 1.00 | DZA65_RS10570 | | pyruvate kinase | low | > 75 |
| Dickeya dadantii 3937 | 0.99 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.98 | DDA3937_RS10125 | | pyruvate kinase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.90 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.95 | HER17_RS11790 | | pyruvate kinase | low | > 75 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.92 | IAI46_14585 | | pyruvate kinase | low | > 86 |
| Rahnella sp. WP5 | 0.87 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.92 | EX31_RS10640 | | pyruvate kinase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.85 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.90 | LU632_RS13370 | pyk | pyruvate kinase | low | > 74 |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_15550 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.91 | HEPCGN_04725 | pyk | pyruvate kinase | low | > 87 |
| Escherichia coli ECRC62 | 0.79 | BNILDI_02990 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | BNILDI_15630 | pyk | pyruvate kinase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS19790 | | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.91 | ECOLIN_RS10330 | | pyruvate kinase | low | > 55 |
| Escherichia coli BW25113 | 0.79 | b3460 | livJ | leucine/isoleucine/valine transporter subunit (NCBI) | 0.90 | b1854 | pykA | pyruvate kinase (NCBI) | 0.14 | 42 |
| Escherichia coli ECRC101 | 0.79 | MCAODC_07250 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | MCAODC_19085 | pyk | pyruvate kinase | low | > 87 |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_11420 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | KEDOAH_01785 | pyk | pyruvate kinase | — | — |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_20350 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | JDDGAC_00895 | pyk | pyruvate kinase | low | > 86 |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_08525 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | NOLOHH_16835 | pyk | pyruvate kinase | low | > 75 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_16720 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | OKFHMN_26320 | pyk | pyruvate kinase | low | > 80 |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_14490 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.90 | NIAGMN_01740 | pyk | pyruvate kinase | — | — |
| Escherichia fergusonii Becca | 0.79 | EFB2_00362 | | Leu/Ile/Val-binding protein | 0.91 | EFB2_02088 | | Pyruvate kinase II | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_00243 | | Leu/Ile/Val-binding protein | 0.90 | OHPLBJKB_01874 | | Pyruvate kinase II | low | > 73 |
| Escherichia coli BL21 | 0.79 | ECD_03309 | | branched-chain amino acid ABC transporter periplasmic binding protein | 0.90 | ECD_01825 | | pyruvate kinase II | low | > 61 |
| Klebsiella michiganensis M5al | 0.79 | BWI76_RS26365 | | branched chain amino acid ABC transporter substrate-binding protein | 0.90 | BWI76_RS18115 | | pyruvate kinase | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF545 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.90 | GFF1633 | | Pyruvate kinase (EC 2.7.1.40) | low | > 78 |
| Pantoea sp. MT58 | 0.78 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.90 | IAI47_08485 | | pyruvate kinase | low | > 76 |
| Enterobacter asburiae PDN3 | 0.78 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.90 | EX28DRAFT_0702 | | pyruvate kinase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_04334 | | Leucine-specific-binding protein | 0.90 | MPMX20_02759 | | Pyruvate kinase II | low | > 85 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.54 | Psyr_4029 | | pyruvate kinase | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.54 | Psest_3190 | | pyruvate kinase | low | > 67 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.54 | Psyr_4029 | | pyruvate kinase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.55 | Pf1N1B4_678 | | Pyruvate kinase (EC 2.7.1.40) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.55 | AO356_17830 | | pyruvate kinase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.55 | Pf6N2E2_5494 | | Pyruvate kinase (EC 2.7.1.40) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.60 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | 0.53 | OH686_18800 | | pyruvate kinase | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.55 | PfGW456L13_1813 | | Pyruvate kinase (EC 2.7.1.40) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.55 | AO353_03775 | | pyruvate kinase | low | > 101 |
| Marinobacter adhaerens HP15 | 0.59 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.58 | HP15_2176 | | pyruvate kinase II | 0.25 | 60 |
| Pseudomonas putida KT2440 | 0.59 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.56 | PP_1362 | | pyruvate kinase II | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.55 | PFLU_RS24255 | | pyruvate kinase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | 0.55 | PS417_22620 | | pyruvate kinase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.55 | PFLU_RS24255 | | pyruvate kinase | low | > 109 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.55 | PFR28_03455 | | Pyruvate kinase II | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | 0.46 | RR42_RS03210 | | pyruvate kinase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS08270 | | amino acid ABC transporter substrate-binding protein | 0.47 | HSERO_RS03350 | | hypothetical protein | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.55 | ABCV34_RS02525 | | pyruvate kinase | low | > 48 |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_04840 | | Leu/Ile/Val-binding protein | 0.31 | MPMX19_04460 | | Pyruvate kinase | low | > 112 |
| Sinorhizobium meliloti 1021 | 0.37 | SMc00078 | | Leu/Ile/Val-binding protein | 0.30 | SMc04005 | | pyruvate kinase | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.37 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.30 | TX73_021735 | | pyruvate kinase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.35 | AMB_RS15010 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | AMB_RS16010 | | pyruvate kinase | — | — |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS14690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.30 | ABIE40_RS16145 | | pyruvate kinase | — | — |
| Agrobacterium fabrum C58 | 0.32 | Atu2422 | | ABC transporter, substrate binding protein (amino acid) | 0.29 | Atu3762 | | pyruvate kinase | — | — |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | ABID97_RS01755 | | pyruvate kinase | low | > 91 |
| Variovorax sp. SCN45 | 0.26 | GFF237 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.46 | GFF5504 | | Pyruvate kinase (EC 2.7.1.40) | low | > 127 |
| Burkholderia phytofirmans PsJN | 0.24 | BPHYT_RS26525 | | amino acid ABC transporter substrate-binding protein | 0.47 | BPHYT_RS16265 | | hypothetical protein | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.24 | H281DRAFT_02161 | | amino acid/amide ABC transporter substrate-binding protein, HAAT family | 0.48 | H281DRAFT_04189 | | pyruvate kinase | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS31655 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.47 | QEN71_RS02430 | | pyruvate kinase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.24 | ABIE53_000461 | | branched-chain amino acid transport system substrate-binding protein | 0.48 | ABIE53_003427 | | pyruvate kinase | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS12690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | RPSI07_RS21150 | | pyruvate kinase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS04695 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | RALBFv3_RS12180 | | pyruvate kinase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS08975 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | UW163_RS01430 | | pyruvate kinase | — | — |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS12255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | RS_RS02865 | | pyruvate kinase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS00315 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.46 | ABZR87_RS08070 | | pyruvate kinase | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_4169 | | Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) | 0.45 | Ac3H11_654 | | Pyruvate kinase (EC 2.7.1.40) | low | > 79 |
Not shown: 7 genomes with orthologs for HGI48_RS20730 only; 18 genomes with orthologs for HGI48_RS10155 only